Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G0343 Fragaria x ananassa HOM05D000828 ORTHO05D000623 2.6e-23 111.3 61 100.0
FAN08G2417 Fragaria x ananassa HOM05D000828 ORTHO05D000623 2.7e-20 101.3 61 91.8
FAN18G2598 Fragaria x ananassa HOM05D000828 ORTHO05D000623 2.7e-20 101.3 61 91.8
MD11G1040000 Malus domestica HOM05D000828 ORTHO05D000623 1.2e-15 85.9 59 78.0
Prupe.1G542200 Prunus persica HOM05D000828 ORTHO05D000623 7.2e-13 76.6 59 72.9
Gohir.A05G215100 Gossypium hirsutum HOM05D000828 ORTHO05D000623 2.7e-12 74.7 58 67.2
Gohir.D05G218400 Gossypium hirsutum HOM05D000828 ORTHO05D000623 3.6e-12 74.3 56 67.9
Gorai.009G225400 Gossypium raimondii HOM05D000828 ORTHO05D000623 3.6e-12 74.3 56 67.9
COL.COLO4_35349 Corchorus olitorius HOM05D000828 ORTHO05D000623 7.9e-12 73.2 58 65.5
Duzib116G0815 Durio zibethinus HOM05D000828 ORTHO05D000623 7.9e-12 73.2 59 62.7
Dinv10613 Davidia involucrata HOM05D000828 ORTHO05D000623 4.4e-10 67.4 57 61.4
TWI36G1300 Tripterygium wilfordii HOM05D000828 ORTHO05D000623 4.4e-10 67.4 59 57.6
Nitab4.5_0005748g0010 Nicotiana tabacum HOM05D000828 ORTHO05D000623 9.7e-10 66.2 60 55.0
PGR083G0051 Punica granatum HOM05D000828 ORTHO05D000623 9.7e-10 66.2 55 60.0
Peaxi162Scf00626g00026 Petunia axillaris HOM05D000828 ORTHO05D000623 3.7e-09 64.3 57 57.9
PGSC0003DMG400004967 Solanum tuberosum HOM05D000828 ORTHO05D000623 3.7e-09 64.3 60 51.7
Lalb_Chr11g0064741 Lupinus albus HOM05D000828 ORTHO05D000623 4.8e-09 63.9 59 55.9
Eucgr.F00466 Eucalyptus grandis HOM05D000828 ORTHO05D000623 8.2e-09 63.2 55 58.2
Lj4C80T3 Lonicera japonica HOM05D000828 ORTHO05D000623 8.2e-09 63.2 59 59.3
ClCG08G011950 Citrullus lanatus HOM05D000828 ORTHO05D000623 1.1e-08 62.8 59 52.5
Nitab4.5_0000377g0110 Nicotiana tabacum HOM05D000828 ORTHO05D000623 1.8e-08 62.0 60 50.0
TAR636G2502 Trochodendron aralioides HOM05D000828 ORTHO05D000623 1.8e-08 62.0 60 51.7
Sopen00g014160 Solanum pennellii HOM05D000828 ORTHO05D000623 2.4e-08 61.6 60 50.0
Aqoxy2G00857 Aquilegia oxysepala HOM05D000828 ORTHO05D000623 3.1e-08 61.2 60 56.7
TAR633G1101 Trochodendron aralioides HOM05D000828 ORTHO05D000623 3.1e-08 61.2 57 52.6
MELO3C011116.2 Cucumis melo HOM05D000828 ORTHO05D000623 4.1e-08 60.8 59 52.5
Cfa017191 Carpinus fangiana HOM05D000828 ORTHO05D000623 5.3e-08 60.5 55 54.5
Solyc04g076970.3 Solanum lycopersicum HOM05D000828 ORTHO05D000623 5.3e-08 60.5 60 48.3
Cpa.g.sc394.4 Carica papaya HOM05D000828 ORTHO05D000623 6.9e-08 60.1 58 53.4
Haze_21020 Corylus avellana HOM05D000828 ORTHO05D000623 6.9e-08 60.1 55 54.5
Oeu059142.1 Olea europaea HOM05D000828 ORTHO05D000623 6.9e-08 60.1 55 58.2
arahy.Tifrunner.gnm1.ann1.BC7D9W Arachis hypogaea HOM05D000828 ORTHO05D000623 9.1e-08 59.7 58 53.4
CiPaw.10G157300 Carya illinoinensis HOM05D000828 ORTHO05D000623 9.1e-08 59.7 58 51.7
Dinv01495 Davidia involucrata HOM05D000828 ORTHO05D000623 9.1e-08 59.7 55 56.4
Sed0008926 Sechium edule HOM05D000828 ORTHO05D000623 1.2e-07 59.3 55 56.4
CsaV3_3G033620 Cucumis sativus L. HOM05D000828 ORTHO05D000623 1.5e-07 58.9 57 54.4
Carub.0002s0622 Capsella rubella HOM05D000828 ORTHO05D000623 2.0e-07 58.5 57 54.4
MELO3C009152.2 Cucumis melo HOM05D000828 ORTHO05D000623 2.0e-07 58.5 57 54.4
Migut.N02825 Erythranthe guttata HOM05D000828 ORTHO05D000623 2.0e-07 58.5 59 52.5
Sc15g0005190 Simmondsia chinensis HOM05D000828 ORTHO05D000623 2.0e-07 58.5 59 50.8
Phvul.009G114600 Phaseolus vulgaris HOM05D000828 ORTHO05D000623 2.6e-07 58.2 58 50.0
SalBow2G3470 Salvia bowleyana HOM05D000828 ORTHO05D000623 2.6e-07 58.2 57 52.6
Sc07g0002470 Simmondsia chinensis HOM05D000828 ORTHO05D000623 3.4e-07 57.8 59 49.2
CANSAT35G1227 Cannabis sativa HOM05D000828 ORTHO05D000623 7.7e-07 56.6 55 52.7
EL10Ac1g02303 Beta vulgaris HOM05D000828 ORTHO05D000623 1.0e-06 56.2 55 54.5
ClCG10G022260 Citrullus lanatus HOM05D000828 ORTHO05D000623 1.0e-06 56.2 57 54.4
HanXRQChr15g0464061 Helianthus annuus HOM05D000828 ORTHO05D000623 1.0e-06 56.2 60 48.3
Nitab4.5_0000797g0150 Nicotiana tabacum HOM05D000828 ORTHO05D000623 1.0e-06 56.2 55 52.7
A06p06650 Brassica napus HOM05D000828 ORTHO05D000623 1.3e-06 55.8 50 60.0
BraA06t23879Z Brassica rapa HOM05D000828 ORTHO05D000623 1.3e-06 55.8 50 60.0
Carub.0001s0935 Capsella rubella HOM05D000828 ORTHO05D000623 1.3e-06 55.8 59 47.5
Hma1.2p1_0362F.1_g136400 Hydrangea macrophylla HOM05D000828 ORTHO05D000623 1.3e-06 55.8 55 50.9
Nn1g09160 Nelumbo nucifera HOM05D000828 ORTHO05D000623 1.7e-06 55.5 59 47.5
Lj1g0006880 Lotus japonicus HOM05D000828 ORTHO05D000623 2.2e-06 55.1 57 47.4
Lalb_Chr01g0023021 Lupinus albus HOM05D000828 ORTHO05D000623 2.2e-06 55.1 54 51.9
Lalb_Chr19g0124611 Lupinus albus HOM05D000828 ORTHO05D000623 2.9e-06 54.7 56 50.0
Peaxi162Scf00284g01040 Petunia axillaris HOM05D000828 ORTHO05D000623 2.9e-06 54.7 55 54.5
Atru.chr8.2263 Acer truncatum HOM05D000828 ORTHO05D000623 3.8e-06 54.3 54 50.0
Eucgr.K02977 Eucalyptus grandis HOM05D000828 ORTHO05D000623 3.8e-06 54.3 56 51.8
QL07p035225 Quercus lobata HOM05D000828 ORTHO05D000623 3.8e-06 54.3 52 51.9
Aa31LG1G4930 Aethionema arabicum HOM05D000828 ORTHO05D000623 5.0e-06 53.9 61 45.9
Aa31LG2G10820 Aethionema arabicum HOM05D000828 ORTHO05D000623 6.5e-06 53.5 59 47.5
CARHR010070 Cardamine hirsuta HOM05D000828 ORTHO05D000623 6.5e-06 53.5 59 45.8
Dinv14997 Davidia involucrata HOM05D000828 ORTHO05D000623 6.5e-06 53.5 51 49.0
PSO339G4904 Papaver somniferum HOM05D000828 ORTHO05D000623 6.5e-06 53.5 59 47.5
Sc01g0006330 Simmondsia chinensis HOM05D000828 ORTHO05D000623 6.5e-06 53.5 55 47.3
AL1G20580 Arabidopsis lyrata HOM05D000828 ORTHO05D000623 8.5e-06 53.1 59 47.5
AT1G58330 Arabidopsis thaliana HOM05D000828 ORTHO05D000623 8.5e-06 53.1 54 50.0
CSS0030663 Camellia sinensis var. sinensis HOM05D000828 ORTHO05D000623 8.5e-06 53.1 52 46.2
Glyma.07G151600 Glycine max HOM05D000828 ORTHO05D000623 8.5e-06 53.1 56 48.2
Sed0016092 Sechium edule HOM05D000828 ORTHO05D000623 8.5e-06 53.1 59 49.2


User provided reference genes

Program Settings