Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G0341 Fragaria x ananassa HOM05D006632 ORTHO05D008224 1.3e-126 456.4 232 100.0
FAN08G0873 Fragaria x ananassa HOM05D006632 ORTHO05D008224 7.9e-121 437.2 235 95.7
FAN18G2132 Fragaria x ananassa HOM05D006632 ORTHO05D008224 2.1e-113 412.5 233 91.8
FAN13G0450 Fragaria x ananassa HOM05D006632 ORTHO05D008224 8.5e-107 390.6 262 81.3
RcHm_v2.0_Chr7g0202881 Rosa chinensis HOM05D006632 ORTHO05D008224 3.7e-102 375.2 242 82.6
Prupe.5G072600 Prunus persica HOM05D006632 ORTHO05D008224 1.0e-91 340.5 239 72.8
Gohir.D12G222100 Gossypium hirsutum HOM05D006632 ORTHO05D008224 1.8e-88 329.7 238 71.8
Gorai.008G238100 Gossypium raimondii HOM05D006632 ORTHO05D008224 1.8e-88 329.7 238 71.8
CiPaw.11G152400 Carya illinoinensis HOM05D006632 ORTHO05D008224 4.0e-88 328.6 238 70.2
Cfa012746 Carpinus fangiana HOM05D006632 ORTHO05D008224 1.2e-87 327.0 235 71.1
Duzib205G0315 Durio zibethinus HOM05D006632 ORTHO05D008224 4.4e-87 325.1 243 71.2
Thecc.03G254100 Theobroma cacao HOM05D006632 ORTHO05D008224 4.4e-87 325.1 231 71.4
Gohir.A12G219900 Gossypium hirsutum HOM05D006632 ORTHO05D008224 9.8e-87 323.9 238 71.4
Haze_07882 Corylus avellana HOM05D006632 ORTHO05D008224 2.2e-86 322.8 231 71.4
Aa31LG2G12620 Aethionema arabicum HOM05D006632 ORTHO05D008224 2.9e-86 322.4 232 70.3
Potri.008G135980 Populus trichocarpa HOM05D006632 ORTHO05D008224 1.8e-85 319.7 234 67.9
Potri.003G111100 Populus trichocarpa HOM05D006632 ORTHO05D008224 2.4e-85 319.3 235 67.7
CANSAT21G1011 Cannabis sativa HOM05D006632 ORTHO05D008224 4.1e-85 318.5 233 70.4
Sopen08g003360 Solanum pennellii HOM05D006632 ORTHO05D008224 5.4e-85 318.2 237 68.8
VMungo0251G2371 Vigna mungo HOM05D006632 ORTHO05D008224 7.0e-85 317.8 236 69.1
Glyma.05G058200 Glycine max HOM05D006632 ORTHO05D008224 9.2e-85 317.4 236 69.9
Solyc08g007410.4 Solanum lycopersicum HOM05D006632 ORTHO05D008224 1.2e-84 317.0 237 68.8
Ciclev10022042m.g Citrus clementina HOM05D006632 ORTHO05D008224 2.7e-84 315.8 239 69.5
PGSC0003DMG400012506 Solanum tuberosum HOM05D006632 ORTHO05D008224 3.5e-84 315.5 237 68.4
Carub.0007s2499 Capsella rubella HOM05D006632 ORTHO05D008224 7.8e-84 314.3 236 68.2
Nitab4.5_0000312g0210 Nicotiana tabacum HOM05D006632 ORTHO05D008224 1.0e-83 313.9 232 69.4
A08p12540 Brassica napus HOM05D006632 ORTHO05D008224 1.7e-83 313.2 227 70.0
BraA08t33245Z Brassica rapa HOM05D006632 ORTHO05D008224 1.7e-83 313.2 227 70.0
Lj2A215T22 Lonicera japonica HOM05D006632 ORTHO05D008224 1.7e-83 313.2 230 69.6
MD06G1061300 Malus domestica HOM05D006632 ORTHO05D008224 2.3e-83 312.8 239 68.6
CARHR222910 Cardamine hirsuta HOM05D006632 ORTHO05D008224 3.0e-83 312.4 235 68.1
Cc08_g12700 Coffea canephora HOM05D006632 ORTHO05D008224 3.9e-83 312.0 239 66.1
Psat4g070160 Pisum sativum HOM05D006632 ORTHO05D008224 3.9e-83 312.0 235 68.1
Nitab4.5_0004059g0060 Nicotiana tabacum HOM05D006632 ORTHO05D008224 5.0e-83 311.6 241 65.1
TWI81G0482 Tripterygium wilfordii HOM05D006632 ORTHO05D008224 5.0e-83 311.6 241 66.0
Oeu062975.1 Olea europaea HOM05D006632 ORTHO05D008224 6.6e-83 311.2 239 67.4
Phvul.003G219500 Phaseolus vulgaris HOM05D006632 ORTHO05D008224 8.6e-83 310.8 236 67.8
Sed0019633 Sechium edule HOM05D006632 ORTHO05D008224 8.6e-83 310.8 231 68.0
AL7G38450 Arabidopsis lyrata HOM05D006632 ORTHO05D008224 1.1e-82 310.5 236 68.2
MELO3C013948.2 Cucumis melo HOM05D006632 ORTHO05D008224 1.1e-82 310.5 231 68.0
BolC8t48376H Brassica oleracea HOM05D006632 ORTHO05D008224 1.9e-82 309.7 227 69.6
AT4G16510 Arabidopsis thaliana HOM05D006632 ORTHO05D008224 3.3e-82 308.9 236 67.4
Lsat_1_v5_gn_6_91561 Lactuca sativa HOM05D006632 ORTHO05D008224 5.6e-82 308.1 229 69.0
DCAR_027784 Daucus carota HOM05D006632 ORTHO05D008224 9.5e-82 307.4 239 66.1
TPR.G37669 Trifolium pratense HOM05D006632 ORTHO05D008224 9.5e-82 307.4 237 67.9
Medtr4g101100 Medicago truncatula HOM05D006632 ORTHO05D008224 1.2e-81 307.0 242 66.5
ClCG10G002780 Citrullus lanatus HOM05D006632 ORTHO05D008224 1.6e-81 306.6 231 67.1
Manes.01G079200 Manihot esculenta HOM05D006632 ORTHO05D008224 1.6e-81 306.6 246 65.9
Nn6g34002 Nelumbo nucifera HOM05D006632 ORTHO05D008224 1.6e-81 306.6 235 67.2
GSVIVG01001305001 Vitis vinifera HOM05D006632 ORTHO05D008224 1.6e-81 306.6 235 66.4
Lj4g0001078 Lotus japonicus HOM05D006632 ORTHO05D008224 2.1e-81 306.2 228 68.9
Nitab4.5_0001707g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 2.1e-81 306.2 251 62.5
Atru.chr9.1340 Acer truncatum HOM05D006632 ORTHO05D008224 2.8e-81 305.8 236 66.5
Migut.A00961 Erythranthe guttata HOM05D006632 ORTHO05D008224 2.8e-81 305.8 249 65.5
Lalb_Chr05g0225741 Lupinus albus HOM05D006632 ORTHO05D008224 3.6e-81 305.4 233 67.0
arahy.Tifrunner.gnm1.ann1.UQJ0AM Arachis hypogaea HOM05D006632 ORTHO05D008224 1.1e-80 303.9 231 68.0
THA.LOC104814709 Tarenaya hassleriana HOM05D006632 ORTHO05D008224 1.1e-80 303.9 228 69.7
Sp7g15070 Schrenkiella parvula HOM05D006632 ORTHO05D008224 3.1e-80 302.4 230 66.5
arahy.Tifrunner.gnm1.ann1.E5X9TE Arachis hypogaea HOM05D006632 ORTHO05D008224 4.0e-80 302.0 231 67.5
Hma1.2p1_0916F.1_g236520 Hydrangea macrophylla HOM05D006632 ORTHO05D008224 1.2e-79 300.4 237 65.8
PSO063G6697 Papaver somniferum HOM05D006632 ORTHO05D008224 1.2e-79 300.4 241 64.7
PSO782G3692 Papaver somniferum HOM05D006632 ORTHO05D008224 1.2e-79 300.4 241 64.7
vmacro14091 Vaccinium macrocarpon HOM05D006632 ORTHO05D008224 2.0e-79 299.7 275 60.4
Actinidia05199 Actinidia chinensis HOM05D006632 ORTHO05D008224 2.6e-79 299.3 240 64.6
Sabra03G0077000 Salix brachista HOM05D006632 ORTHO05D008224 2.6e-79 299.3 275 59.6
CSS0044555 Camellia sinensis var. sinensis HOM05D006632 ORTHO05D008224 3.4e-79 298.9 247 63.6
Thhalv10026162m.g Eutrema salsugineum HOM05D006632 ORTHO05D008224 4.4e-79 298.5 231 66.2
HanXRQChr03g0088651 Helianthus annuus HOM05D006632 ORTHO05D008224 4.4e-79 298.5 221 67.9
Rhsim07G0107100 Rhododendron simsii HOM05D006632 ORTHO05D008224 4.4e-79 298.5 239 66.9
ECA240G2825 Erigeron canadensis HOM05D006632 ORTHO05D008224 1.3e-78 297.0 229 62.9
PGR042G2887 Punica granatum HOM05D006632 ORTHO05D008224 1.4e-77 293.5 240 64.2
MSTRG.25531 Avicennia marina HOM05D006632 ORTHO05D008224 2.4e-77 292.7 236 64.8
Eucgr.E00435 Eucalyptus grandis HOM05D006632 ORTHO05D008224 4.1e-77 292.0 244 62.7
Ah.12g056690 Amaranthus hybridus HOM05D006632 ORTHO05D008224 9.2e-77 290.8 236 64.0
SGA_v2.0_scaffold120G32870 Striga asiatica HOM05D006632 ORTHO05D008224 9.2e-77 290.8 288 56.2
AUR62039953 Chenopodium quinoa HOM05D006632 ORTHO05D008224 6.0e-76 288.1 223 66.4
CsaV3_3G002820 Cucumis sativus L. HOM05D006632 ORTHO05D008224 1.3e-75 287.0 228 64.0
CAN.G1227.10 Capsicum annuum HOM05D006632 ORTHO05D008224 2.3e-75 286.2 184 73.9
MD00G1115100 Malus domestica HOM05D006632 ORTHO05D008224 1.1e-74 283.9 245 62.4
Aqoxy5G03914 Aquilegia oxysepala HOM05D006632 ORTHO05D008224 1.5e-74 283.5 230 64.3
CDE02G1947 Ceratophyllum demersum HOM05D006632 ORTHO05D008224 5.6e-74 281.6 196 71.4
HPP92_014478 Vanilla planifolia HOM05D006632 ORTHO05D008224 7.3e-74 281.2 239 61.5
EL10Ac5g13049 Beta vulgaris HOM05D006632 ORTHO05D008224 1.2e-73 280.4 227 63.4
Rhsim07G0106500 Rhododendron simsii HOM05D006632 ORTHO05D008224 1.4e-72 276.9 306 53.3
AUR62007500 Chenopodium quinoa HOM05D006632 ORTHO05D008224 1.8e-72 276.6 224 64.7
BcaC07g37993 Brassica carinata HOM05D006632 ORTHO05D008224 2.0e-71 273.1 201 70.6
Os02g0662200 Oryza sativa ssp. japonica HOM05D006632 ORTHO05D008224 2.2e-70 269.6 237 57.8
Zm00001eb249830 Zea mays HOM05D006632 ORTHO05D008224 2.2e-70 269.6 238 58.8
unitig_27.g25096 Utricularia gibba HOM05D006632 ORTHO05D008224 4.1e-69 265.4 190 68.9
Peaxi162Scf00102g01151 Petunia axillaris HOM05D006632 ORTHO05D008224 9.5e-66 254.2 239 57.3
Dinv21617 Davidia involucrata HOM05D006632 ORTHO05D008224 3.6e-65 252.3 234 58.5
SEGI_31519 Sequoiadendron giganteum HOM05D006632 ORTHO05D008224 1.4e-64 250.4 232 56.0
Sc01g0008570 Simmondsia chinensis HOM05D006632 ORTHO05D008224 4.0e-64 248.8 169 72.8
Pp3c24_4050 Physcomitrium patens HOM05D006632 ORTHO05D008224 4.9e-62 241.9 187 64.2
QL12p012693 Quercus lobata HOM05D006632 ORTHO05D008224 1.1e-61 240.7 192 65.1
Mapoly0121s0036 Marchantia polymorpha HOM05D006632 ORTHO05D008224 9.2e-61 237.7 186 62.9
SMO143G0241 Selaginella moellendorffii HOM05D006632 ORTHO05D008224 9.2e-61 237.7 189 60.3
Nitab4.5_0017825g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 1.6e-60 236.9 193 64.2
Hund14588 Selenicereus undatus HOM05D006632 ORTHO05D008224 1.1e-58 230.7 381 39.6
DCAR_004945 Daucus carota HOM05D006632 ORTHO05D008224 2.6e-55 219.5 228 53.1
CBR_g26463 Chara braunii HOM05D006632 ORTHO05D008224 5.4e-53 211.8 192 56.2
Ca_22220_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 1.1e-45 187.6 158 63.9
SalBow6G7145 Salvia bowleyana HOM05D006632 ORTHO05D008224 1.2e-44 184.1 155 63.9
Ca_21955_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 2.1e-44 183.3 149 65.8
Cre07.g338250 Chlamydomonas reinhardtii HOM05D006632 ORTHO05D008224 5.1e-43 178.7 197 46.7
FvH4_5g00080 Fragaria vesca HOM05D011292 ORTHO05D013599 5.8e-39 165.2 95 91.6
C01p26240 Brassica napus HOM05D006632 ORTHO05D008224 6.7e-35 151.8 140 59.3
BolC1t02568H Brassica oleracea HOM05D006632 ORTHO05D008224 6.7e-35 151.8 140 59.3
ATR0564G418 Amborella trichopoda HOM05D006632 ORTHO05D008224 1.1e-34 151.0 165 55.2
PRCOL_00001140 Prasinoderma coloniale HOM05D006632 ORTHO05D008224 5.3e-32 142.1 224 37.1
Dinv39125 Davidia involucrata HOM05D006632 ORTHO05D008224 1.0e-30 137.9 137 57.7
MCO15G182 Micromonas commoda HOM05D006632 ORTHO05D008224 1.7e-30 137.1 169 43.2
BraA01t02010Z Brassica rapa HOM05D006632 ORTHO05D008224 1.6e-25 120.6 156 48.1
A01p20910 Brassica napus HOM05D006632 ORTHO05D008224 1.4e-24 117.5 156 47.4
Peaxi162Scf00002g00156 Petunia axillaris HOM05D006632 ORTHO05D008224 7.2e-21 105.1 86 60.5
AagrBONN_evm.TU.Sc2ySwM_117.1014 Anthoceros agrestis HOM05D006632 ORTHO05D008224 2.7e-20 103.2 144 42.4
Duzib068G0053 Durio zibethinus HOM05D006632 ORTHO05D008224 7.9e-20 101.7 59 76.3
Cpa.g.sc276.6 Carica papaya HOM05D006632 ORTHO05D008224 2.3e-19 100.1 108 56.5
DCAR_004944 Daucus carota HOM05D006632 ORTHO05D008224 1.1e-16 91.3 91 56.0
TAR636G0287 Trochodendron aralioides HOM05D006632 ORTHO05D008224 3.8e-14 82.8 99 48.5
Potri.001G122501 Populus trichocarpa HOM05D006632 ORTHO05D008224 2.2e-09 67.0 53 56.6
Sabra01G0094400 Salix brachista HOM05D006632 ORTHO05D008224 2.8e-09 66.6 47 63.8


User provided reference genes

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