Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G0231 Fragaria x ananassa HOM05D002085 ORTHO05D002103 2.7e-58 228.4 113 100.0
FAN13G1306 Fragaria x ananassa HOM05D002085 ORTHO05D002103 1.2e-40 169.9 90 95.6
FAN08G2001 Fragaria x ananassa HOM05D002085 ORTHO05D002103 3.7e-39 164.9 90 93.3
FAN18G0984 Fragaria x ananassa HOM05D002085 ORTHO05D002103 1.8e-38 162.5 90 92.2
FvH4_5g09150 Fragaria vesca HOM05D002085 ORTHO05D002103 1.6e-29 132.9 90 80.0
RcHm_v2.0_Chr7g0189011 Rosa chinensis HOM05D002085 ORTHO05D002103 1.2e-26 123.2 90 74.4
Prupe.5G144300 Prunus persica HOM05D002085 ORTHO05D002103 6.6e-20 100.9 90 61.1
MD06G1133100 Malus domestica HOM05D002085 ORTHO05D002103 2.8e-18 95.5 90 57.8
MD14G1149500 Malus domestica HOM05D002085 ORTHO05D002103 2.8e-18 95.5 90 60.0
Ciclev10031219m.g Citrus clementina HOM05D002085 ORTHO05D002103 4.1e-14 81.6 91 50.5
Duzib205G0469 Durio zibethinus HOM05D002085 ORTHO05D002103 5.4e-14 81.3 90 45.6
Thecc.03G138100 Theobroma cacao HOM05D002085 ORTHO05D002103 3.5e-13 78.6 91 45.1
Dinv11222 Davidia involucrata HOM05D002085 ORTHO05D002103 3.0e-12 75.5 91 46.2
Actinidia08902 Actinidia chinensis HOM05D002085 ORTHO05D002103 3.9e-12 75.1 88 48.9
Potri.012G105000 Populus trichocarpa HOM05D002085 ORTHO05D002103 3.9e-12 75.1 85 49.4
Manes.14G046200 Manihot esculenta HOM05D002085 ORTHO05D002103 6.6e-12 74.3 88 48.9
Thhalv10010292m.g Eutrema salsugineum HOM05D002085 ORTHO05D002103 3.3e-11 72.0 92 46.7
CiPaw.11G001700 Carya illinoinensis HOM05D002085 ORTHO05D002103 4.3e-11 71.6 94 44.7
Gohir.A12G193200 Gossypium hirsutum HOM05D002085 ORTHO05D002103 4.3e-11 71.6 91 46.2
Gorai.008G210000 Gossypium raimondii HOM05D002085 ORTHO05D002103 4.3e-11 71.6 91 46.2
THA.LOC104821535 Tarenaya hassleriana HOM05D002085 ORTHO05D002103 9.5e-11 70.5 93 45.2
Gohir.D12G195300 Gossypium hirsutum HOM05D002085 ORTHO05D002103 1.2e-10 70.1 91 45.1
Cfa018725 Carpinus fangiana HOM05D002085 ORTHO05D002103 2.1e-10 69.3 91 47.3
Cc04_g09410 Coffea canephora HOM05D002085 ORTHO05D002103 2.1e-10 69.3 92 48.9
Carub.0005s1500 Capsella rubella HOM05D002085 ORTHO05D002103 2.8e-10 68.9 92 45.7
Sabra12G0077400 Salix brachista HOM05D002085 ORTHO05D002103 3.6e-10 68.6 85 45.9
TAR622G1337 Trochodendron aralioides HOM05D002085 ORTHO05D002103 6.2e-10 67.8 90 43.3
Potri.015G104300 Populus trichocarpa HOM05D002085 ORTHO05D002103 2.3e-09 65.9 87 43.7
AL5G28340 Arabidopsis lyrata HOM05D002085 ORTHO05D002103 5.2e-09 64.7 92 43.5
AL6G34960 Arabidopsis lyrata HOM05D002085 ORTHO05D002103 8.9e-09 63.9 92 42.4
QL10p001008 Quercus lobata HOM05D002085 ORTHO05D002103 8.9e-09 63.9 102 44.1
AT3G48830 Arabidopsis thaliana HOM05D002085 ORTHO05D002103 2.6e-08 62.4 92 43.5
CDE06G2023 Ceratophyllum demersum HOM05D002085 ORTHO05D002103 2.6e-08 62.4 87 41.4
Glyma.08G009000 Glycine max HOM05D002085 ORTHO05D002103 2.6e-08 62.4 85 40.0
AT5G23690 Arabidopsis thaliana HOM05D002085 ORTHO05D002103 4.4e-08 61.6 91 41.8
CARHR189860 Cardamine hirsuta HOM05D002085 ORTHO05D002103 5.8e-08 61.2 92 39.1
unitig_22.g6257 Utricularia gibba HOM05D002085 ORTHO05D002103 5.8e-08 61.2 87 40.2
BcaNung05211 Brassica carinata HOM05D002085 ORTHO05D002103 7.5e-08 60.8 96 44.8
GSVIVG01004931001 Vitis vinifera HOM05D002085 ORTHO05D002103 9.9e-08 60.5 93 43.0
Actinidia30597 Actinidia chinensis HOM05D002085 ORTHO05D002103 1.3e-07 60.1 91 41.8
Rhsim12G0018600 Rhododendron simsii HOM05D002085 ORTHO05D002103 1.3e-07 60.1 90 42.2
BraA06t26387Z Brassica rapa HOM05D002085 ORTHO05D002103 1.7e-07 59.7 96 42.7
C07p43900 Brassica napus HOM05D002085 ORTHO05D002103 2.2e-07 59.3 94 43.6
CSS0044560 Camellia sinensis var. sinensis HOM05D002085 ORTHO05D002103 2.2e-07 59.3 91 40.7
Glyma.05G201500 Glycine max HOM05D002085 ORTHO05D002103 2.2e-07 59.3 85 37.6
PSO017G1089 Papaver somniferum HOM05D002085 ORTHO05D002103 2.2e-07 59.3 90 44.4
TWI39G1242 Tripterygium wilfordii HOM05D002085 ORTHO05D002103 2.2e-07 59.3 91 38.5
Aa31LG11G3030 Aethionema arabicum HOM05D002085 ORTHO05D002103 2.9e-07 58.9 92 40.2
Ca_17580_v3 Cicer arietinum L. HOM05D002085 ORTHO05D002103 3.7e-07 58.5 85 43.5
Sp2g23540 Schrenkiella parvula HOM05D002085 ORTHO05D002103 3.7e-07 58.5 92 43.5
PSO478G0961 Papaver somniferum HOM05D002085 ORTHO05D002103 6.4e-07 57.8 90 43.3
BcaNung01847 Brassica carinata HOM05D002085 ORTHO05D002103 1.4e-06 56.6 94 42.6
BolC7t44918H Brassica oleracea HOM05D002085 ORTHO05D002103 1.4e-06 56.6 94 42.6
TWI23G0364 Tripterygium wilfordii HOM05D002085 ORTHO05D002103 2.4e-06 55.8 91 40.7


User provided reference genes

Program Settings