Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G0186 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.8e-79 299.3 162 100.0
FvH4_5g18550 Fragaria vesca HOM05D006168 ORTHO05D007602 2.9e-77 292.0 163 98.2
FAN18G0639 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.1e-76 290.0 163 97.5
FAN08G3581 Fragaria x ananassa HOM05D006168 ORTHO05D007602 9.3e-68 260.4 162 90.1
RcHm_v2.0_Chr7g0176961 Rosa chinensis HOM05D006168 ORTHO05D007602 1.4e-63 246.5 162 84.0
Prupe.5G244900 Prunus persica HOM05D006168 ORTHO05D007602 2.1e-51 206.1 163 73.0
FAN13G0455 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.1e-47 191.8 105 99.0
Dinv03501 Davidia involucrata HOM05D006168 ORTHO05D007602 7.2e-44 181.0 164 66.5
Dinv03506 Davidia involucrata HOM05D006168 ORTHO05D007602 7.2e-44 181.0 164 66.5
CiPaw.16G075600 Carya illinoinensis HOM05D006168 ORTHO05D007602 1.6e-43 179.9 163 65.6
Duzib128G1786 Durio zibethinus HOM05D006168 ORTHO05D007602 2.1e-43 179.5 162 64.8
Duzib114G0883 Durio zibethinus HOM05D006168 ORTHO05D007602 3.6e-43 178.7 162 65.4
MD06G1240400 Malus domestica HOM05D006168 ORTHO05D007602 1.0e-42 177.2 159 67.3
CDE04G1298 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 1.8e-42 176.4 154 64.9
Gohir.A05G294800 Gossypium hirsutum HOM05D006168 ORTHO05D007602 2.3e-42 176.0 156 66.0
Gohir.D05G295400 Gossypium hirsutum HOM05D006168 ORTHO05D007602 2.3e-42 176.0 156 66.0
MD14G1246600 Malus domestica HOM05D006168 ORTHO05D007602 8.8e-42 174.1 163 65.6
GSVIVG01024249001 Vitis vinifera HOM05D006168 ORTHO05D007602 1.5e-41 173.3 163 62.6
Thecc.10G078900 Theobroma cacao HOM05D006168 ORTHO05D007602 2.0e-41 172.9 162 64.2
Sabra04G0045100 Salix brachista HOM05D006168 ORTHO05D007602 2.5e-41 172.6 160 64.4
Potri.004G067300 Populus trichocarpa HOM05D006168 ORTHO05D007602 3.3e-41 172.2 159 64.2
Nn3g18550 Nelumbo nucifera HOM05D006168 ORTHO05D007602 7.4e-41 171.0 156 63.5
COL.COLO4_12167 Corchorus olitorius HOM05D006168 ORTHO05D007602 1.7e-40 169.9 162 63.6
QL10p033704 Quercus lobata HOM05D006168 ORTHO05D007602 3.7e-40 168.7 143 67.8
CANSAT35G1332 Cannabis sativa HOM05D006168 ORTHO05D007602 8.2e-40 167.5 157 61.8
Gorai.009G312100 Gossypium raimondii HOM05D006168 ORTHO05D007602 1.1e-39 167.2 146 65.1
MELO3C002180.2 Cucumis melo HOM05D006168 ORTHO05D007602 3.1e-39 165.6 162 65.4
Ah.14g084700 Amaranthus hybridus HOM05D006168 ORTHO05D007602 4.1e-39 165.2 154 64.9
Cfa017805 Carpinus fangiana HOM05D006168 ORTHO05D007602 4.1e-39 165.2 144 66.0
CsaV3_1G007610 Cucumis sativus L. HOM05D006168 ORTHO05D007602 4.1e-39 165.2 154 65.6
TWI81G0790 Tripterygium wilfordii HOM05D006168 ORTHO05D007602 4.1e-39 165.2 163 63.8
CDE08G0644 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 5.3e-39 164.9 156 62.2
Manes.02G226600 Manihot esculenta HOM05D006168 ORTHO05D007602 6.9e-39 164.5 156 63.5
Atru.chr9.17 Acer truncatum HOM05D006168 ORTHO05D007602 2.0e-38 162.9 168 59.5
AUR62028326 Chenopodium quinoa HOM05D006168 ORTHO05D007602 2.0e-38 162.9 164 60.4
ClCG01G014720 Citrullus lanatus HOM05D006168 ORTHO05D007602 2.0e-38 162.9 162 63.6
Hund08905 Selenicereus undatus HOM05D006168 ORTHO05D007602 3.4e-38 162.2 157 61.8
Sed0019180 Sechium edule HOM05D006168 ORTHO05D007602 4.5e-38 161.8 154 66.9
Lsat_1_v5_gn_2_6441 Lactuca sativa HOM05D006168 ORTHO05D007602 2.9e-37 159.1 152 61.2
RcHm_v2.0_Chr5g0006211 Rosa chinensis HOM05D006168 ORTHO05D007602 2.9e-37 159.1 159 57.9
Aqoxy2G03978 Aquilegia oxysepala HOM05D006168 ORTHO05D007602 3.8e-37 158.7 158 58.9
ECA238G2000 Erigeron canadensis HOM05D006168 ORTHO05D007602 6.5e-37 157.9 153 60.1
Lj5g0014337 Lotus japonicus HOM05D006168 ORTHO05D007602 6.5e-37 157.9 164 62.2
AUR62025335 Chenopodium quinoa HOM05D006168 ORTHO05D007602 1.4e-36 156.8 143 62.2
Rhsim12G0137000 Rhododendron simsii HOM05D006168 ORTHO05D007602 1.4e-36 156.8 143 63.6
EL10Ac8g18962 Beta vulgaris HOM05D006168 ORTHO05D007602 1.9e-36 156.4 157 59.2
HanXRQChr14g0428251 Helianthus annuus HOM05D006168 ORTHO05D007602 3.2e-36 155.6 159 59.7
ATR0124G011 Amborella trichopoda HOM05D006168 ORTHO05D007602 4.2e-36 155.2 158 57.0
TAR629G1867 Trochodendron aralioides HOM05D006168 ORTHO05D007602 7.2e-36 154.5 160 57.5
Eucgr.H00657 Eucalyptus grandis HOM05D006168 ORTHO05D007602 2.7e-35 152.5 150 58.0
PGR083G1429 Punica granatum HOM05D006168 ORTHO05D007602 3.6e-35 152.1 164 58.5
Migut.D02066 Erythranthe guttata HOM05D006168 ORTHO05D007602 7.9e-35 151.0 169 57.4
DCAR_011406 Daucus carota HOM05D006168 ORTHO05D007602 1.4e-34 150.2 144 60.4
Peaxi162Scf00643g00537 Petunia axillaris HOM05D006168 ORTHO05D007602 1.4e-34 150.2 157 56.1
ECA238G2968 Erigeron canadensis HOM05D000092 ORTHO05D000042 5.1e-34 148.3 140 60.0
MSTRG.4316 Avicennia marina HOM05D006168 ORTHO05D007602 6.7e-34 147.9 159 56.6
Solyc06g072170.2 Solanum lycopersicum HOM05D006168 ORTHO05D007602 6.7e-34 147.9 161 53.4
Sopen06g028470 Solanum pennellii HOM05D006168 ORTHO05D007602 6.7e-34 147.9 161 53.4
PGSC0003DMG400027059 Solanum tuberosum HOM05D006168 ORTHO05D007602 8.8e-34 147.5 161 54.7
Thhalv10021722m.g Eutrema salsugineum HOM05D006168 ORTHO05D007602 1.5e-33 146.7 155 58.7
vmacro16399 Vaccinium macrocarpon HOM05D006168 ORTHO05D007602 4.4e-33 145.2 167 54.5
MBI06_g12548_MAGBIO Magnolia biondii HOM05D006168 ORTHO05D007602 5.7e-33 144.8 165 57.0
ECA238G0114 Erigeron canadensis HOM05D006168 ORTHO05D007602 7.4e-33 144.4 161 52.8
ECA238G1897 Erigeron canadensis HOM05D006168 ORTHO05D007602 7.4e-33 144.4 161 52.8
BraA03t12572Z Brassica rapa HOM05D006168 ORTHO05D007602 1.3e-32 143.7 154 59.7
BolC3t16418H Brassica oleracea HOM05D006168 ORTHO05D007602 1.7e-32 143.3 156 57.7
SGA_v2.0_scaffold387G50509 Striga asiatica HOM05D006168 ORTHO05D007602 2.8e-32 142.5 165 55.8
Cc02_g29290 Coffea canephora HOM05D006168 ORTHO05D007602 4.8e-32 141.7 168 53.0
Sp3g03900 Schrenkiella parvula HOM05D006168 ORTHO05D007602 4.8e-32 141.7 155 56.8
CARHR079400 Cardamine hirsuta HOM05D006168 ORTHO05D007602 2.4e-31 139.4 154 57.1
Glyma.20G216400 Glycine max HOM05D006168 ORTHO05D007602 4.1e-31 138.7 165 57.0
PSO063G5228 Papaver somniferum HOM05D006168 ORTHO05D007602 9.1e-31 137.5 158 53.8
HPP92_020852 Vanilla planifolia HOM05D006168 ORTHO05D007602 1.2e-30 137.1 160 56.9
CSS0046866 Camellia sinensis var. sinensis HOM05D006168 ORTHO05D007602 1.6e-30 136.7 97 76.3
Aa31LG5G15370 Aethionema arabicum HOM05D006168 ORTHO05D007602 3.5e-30 135.6 154 55.8
FAN25G2877 Fragaria x ananassa HOM05D006168 ORTHO05D007602 7.7e-30 134.4 155 52.9
Phvul.L006301 Phaseolus vulgaris HOM05D006168 ORTHO05D007602 7.7e-30 134.4 164 53.7
FAN16G2203 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.0e-29 134.0 160 54.4
Glyma.10G174000 Glycine max HOM05D006168 ORTHO05D007602 1.0e-29 134.0 165 53.9
unitig_21.g20432 Utricularia gibba HOM05D006168 ORTHO05D007602 1.0e-29 134.0 152 55.9
VMungo0720G1915 Vigna mungo HOM05D006168 ORTHO05D007602 1.0e-29 134.0 164 53.7
FAN11G1802 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.3e-29 133.7 153 54.2
FvH4_3g03920 Fragaria vesca HOM05D006168 ORTHO05D007602 2.2e-29 132.9 153 53.6
FAN21G2556 Fragaria x ananassa HOM05D006168 ORTHO05D007602 3.8e-29 132.1 155 53.5
AL3G15460 Arabidopsis lyrata HOM05D006168 ORTHO05D007602 1.9e-28 129.8 154 55.2
Lalb_Chr21g0311691 Lupinus albus HOM05D006168 ORTHO05D007602 2.5e-28 129.4 155 54.8
AT3G05070 Arabidopsis thaliana HOM05D006168 ORTHO05D007602 5.5e-28 128.3 154 54.5
Medtr1g077570 Medicago truncatula HOM05D006168 ORTHO05D007602 7.2e-28 127.9 170 51.8
Ca_09928_v3 Cicer arietinum L. HOM05D006168 ORTHO05D007602 1.6e-27 126.7 169 53.3
Ciclev10022597m.g Citrus clementina HOM05D006168 ORTHO05D007602 2.7e-27 125.9 156 50.0
SalBow8G4549 Salvia bowleyana HOM05D006168 ORTHO05D007602 6.1e-27 124.8 160 51.9
CAN.G65.65 Capsicum annuum HOM05D006168 ORTHO05D007602 8.0e-27 124.4 101 62.4
C05p62160 Brassica napus HOM05D006168 ORTHO05D007602 1.0e-26 124.0 161 52.2
BolC5t34874H Brassica oleracea HOM05D006168 ORTHO05D007602 1.0e-26 124.0 161 52.2
Carub.0003s0432 Capsella rubella HOM05D006168 ORTHO05D007602 1.4e-26 123.6 154 51.9
Haze_18408 Corylus avellana HOM05D006168 ORTHO05D007602 1.4e-26 123.6 85 75.3
A05p42500 Brassica napus HOM05D006168 ORTHO05D007602 1.8e-26 123.2 161 52.2
BraA05t23002Z Brassica rapa HOM05D006168 ORTHO05D007602 1.8e-26 123.2 161 52.2
Oeu034422.1 Olea europaea HOM05D006168 ORTHO05D007602 1.8e-26 123.2 141 56.7
Psat6g054520 Pisum sativum HOM05D006168 ORTHO05D007602 2.3e-26 122.9 157 51.0
THA.LOC104818656 Tarenaya hassleriana HOM05D006168 ORTHO05D007602 4.0e-26 122.1 163 50.3
SEGI_05677 Sequoiadendron giganteum HOM05D006168 ORTHO05D007602 4.4e-25 118.6 162 48.1
Os06g0730800 Oryza sativa ssp. japonica HOM05D006168 ORTHO05D007602 1.4e-23 113.6 182 42.9
AagrBONN_evm.TU.Sc2ySwM_368.389 Anthoceros agrestis HOM05D006168 ORTHO05D007602 7.0e-23 111.3 145 50.3
Pp3c19_22150 Physcomitrium patens HOM05D006168 ORTHO05D007602 2.0e-22 109.8 139 51.1
Zm00001eb228960 Zea mays HOM05D006168 ORTHO05D007602 6.5e-21 104.8 172 42.4
arahy.Tifrunner.gnm1.ann1.52MA05 Arachis hypogaea HOM05D006168 ORTHO05D007602 1.5e-20 103.6 142 49.3
BcaC05g29992 Brassica carinata HOM05D006168 ORTHO05D007602 1.5e-20 103.6 161 42.2
Mapoly0133s0024 Marchantia polymorpha HOM05D006168 ORTHO05D007602 2.5e-20 102.8 144 46.5
Nitab4.5_0000477g0160 Nicotiana tabacum HOM05D006168 ORTHO05D007602 4.2e-20 102.1 86 60.5
Nitab4.5_0002771g0020 Nicotiana tabacum HOM05D006168 ORTHO05D007602 1.6e-19 100.1 84 60.7
Potri.017G154100 Populus trichocarpa HOM05D006168 ORTHO05D007602 4.7e-19 98.6 99 59.6
SMO147G0110 Selaginella moellendorffii HOM05D006168 ORTHO05D007602 1.8e-18 96.7 139 44.6
Sed0015845 Sechium edule HOM05D006168 ORTHO05D007602 1.7e-16 90.1 150 44.0
Sc15g0000010 Simmondsia chinensis HOM05D006168 ORTHO05D007602 2.8e-16 89.4 105 55.2
BcaB04g19282 Brassica carinata HOM05D006168 ORTHO05D007602 6.3e-16 88.2 82 63.4
CBR_g57849 Chara braunii HOM05D006168 ORTHO05D007602 4.1e-15 85.5 94 53.2
Cre12.g518300 Chlamydomonas reinhardtii HOM05D006168 ORTHO05D007602 7.0e-15 84.7 147 42.2
TPR.G8871 Trifolium pratense HOM05D006168 ORTHO05D007602 8.5e-13 77.8 60 73.3
BcaC01g04336 Brassica carinata HOM05D006168 ORTHO05D007602 7.2e-12 74.7 120 44.2
arahy.Tifrunner.gnm1.ann1.S1M3RU Arachis hypogaea HOM05D006168 ORTHO05D007602 7.5e-09 64.7 118 39.8
TPR.G35595 Trifolium pratense HOM05D006168 ORTHO05D007602 1.3e-08 63.9 113 41.6
MCO12G027 Micromonas commoda HOM05D006168 ORTHO05D007602 4.9e-08 62.0 144 36.8
Cpa.g.sc117.34 Carica papaya HOM05D006168 ORTHO05D007602 3.5e-06 55.8 48 66.7


User provided reference genes

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