Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G0070 Fragaria x ananassa HOM05D007115 ORTHO05D008923 2.1e-67 258.8 126 100.0
FAN18G1815 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.4e-34 149.8 79 92.4
FAN13G2062 Fragaria x ananassa HOM05D007115 ORTHO05D008923 8.1e-19 97.4 49 91.8
FvH4_5g08420 Fragaria vesca HOM05D007115 ORTHO05D008923 6.2e-11 71.2 47 76.6
FAN04G1902 Fragaria x ananassa HOM05D007115 ORTHO05D008923 6.2e-11 71.2 47 76.6
FAN08G1896 Fragaria x ananassa HOM05D007115 ORTHO05D008923 6.2e-11 71.2 47 76.6
FAN13G1038 Fragaria x ananassa HOM05D007115 ORTHO05D008923 6.2e-11 71.2 47 76.6
FAN18G3505 Fragaria x ananassa HOM05D007115 ORTHO05D008923 6.2e-11 71.2 47 76.6
Oeu004998.1 Olea europaea HOM05D007115 ORTHO05D008923 1.2e-09 67.0 69 52.2
GSVIVG01008566001 Vitis vinifera HOM05D007115 ORTHO05D008923 2.0e-09 66.2 53 62.3
Cfa018785 Carpinus fangiana HOM05D007115 ORTHO05D008923 4.5e-09 65.1 53 62.3
CiPaw.12G043900 Carya illinoinensis HOM05D007115 ORTHO05D008923 4.5e-09 65.1 53 60.4
Prupe.5G150000 Prunus persica HOM05D007115 ORTHO05D008923 4.5e-09 65.1 47 68.1
Actinidia25565 Actinidia chinensis HOM05D007115 ORTHO05D008923 5.8e-09 64.7 63 52.4
Haze_07151 Corylus avellana HOM05D007115 ORTHO05D008923 5.8e-09 64.7 53 62.3
Hma1.2p1_0014F.1_g009320 Hydrangea macrophylla HOM05D007115 ORTHO05D008923 5.8e-09 64.7 47 66.0
CSS0028892 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 7.6e-09 64.3 69 50.7
CSS0028949 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 7.6e-09 64.3 69 50.7
Ciclev10032623m.g Citrus clementina HOM05D007115 ORTHO05D008923 7.6e-09 64.3 49 65.3
Duzib205G1497 Durio zibethinus HOM05D007115 ORTHO05D008923 7.6e-09 64.3 55 56.4
Lalb_Chr11g0069511 Lupinus albus HOM05D007115 ORTHO05D008923 9.9e-09 63.9 55 58.2
Rhsim08G0191000 Rhododendron simsii HOM05D007115 ORTHO05D008923 9.9e-09 63.9 75 48.0
Atru.chr6.1807 Acer truncatum HOM05D007115 ORTHO05D008923 1.3e-08 63.5 47 66.0
Medtr3g099140 Medicago truncatula HOM05D007115 ORTHO05D008923 1.3e-08 63.5 62 51.6
Glyma.04G196500 Glycine max HOM05D007115 ORTHO05D008923 1.7e-08 63.2 55 60.0
MD06G1140800 Malus domestica HOM05D007115 ORTHO05D008923 1.7e-08 63.2 43 72.1
Glyma.06G169300 Glycine max HOM05D007115 ORTHO05D008923 2.2e-08 62.8 55 58.2
RcHm_v2.0_Chr7g0190021 Rosa chinensis HOM05D007115 ORTHO05D008923 2.9e-08 62.4 47 68.1
TPR.G14207 Trifolium pratense HOM05D007115 ORTHO05D008923 2.9e-08 62.4 49 65.3
Manes.14G050500 Manihot esculenta HOM05D007115 ORTHO05D008923 3.8e-08 62.0 53 58.5
Potri.015G097700 Populus trichocarpa HOM05D007115 ORTHO05D008923 3.8e-08 62.0 53 58.5
Sabra15G0118300 Salix brachista HOM05D007115 ORTHO05D008923 3.8e-08 62.0 53 60.4
Thecc.03G130400 Theobroma cacao HOM05D007115 ORTHO05D008923 3.8e-08 62.0 55 54.5
VMungo1309G2111 Vigna mungo HOM05D007115 ORTHO05D008923 3.8e-08 62.0 55 58.2
Nn4g22293 Nelumbo nucifera HOM05D007115 ORTHO05D008923 4.9e-08 61.6 50 58.0
Phvul.009G165800 Phaseolus vulgaris HOM05D007115 ORTHO05D008923 4.9e-08 61.6 55 58.2
TWI39G0929 Tripterygium wilfordii HOM05D007115 ORTHO05D008923 6.4e-08 61.2 49 61.2
CANSAT80G2203 Cannabis sativa HOM05D007115 ORTHO05D008923 8.4e-08 60.8 43 67.4
Lj1g0010129 Lotus japonicus HOM05D007115 ORTHO05D008923 8.4e-08 60.8 62 54.8
MBI11_g41395_MAGBIO Magnolia biondii HOM05D007115 ORTHO05D008923 8.4e-08 60.8 53 56.6
Psat5g051920 Pisum sativum HOM05D007115 ORTHO05D008923 8.4e-08 60.8 48 60.4
THA.LOC104811583 Tarenaya hassleriana HOM05D007115 ORTHO05D008923 1.1e-07 60.5 47 61.7
Lsat_1_v5_gn_1_33120 Lactuca sativa HOM05D007115 ORTHO05D008923 1.4e-07 60.1 47 57.4
Lj5A95G76 Lonicera japonica HOM05D007115 ORTHO05D008923 1.4e-07 60.1 50 60.0
Nitab4.5_0000624g0110 Nicotiana tabacum HOM05D007115 ORTHO05D008923 1.4e-07 60.1 53 56.6
TAR622G0416 Trochodendron aralioides HOM05D007115 ORTHO05D008923 1.4e-07 60.1 130 31.5
Cpa.g.sc13.101 Carica papaya HOM05D007115 ORTHO05D008923 1.9e-07 59.7 55 54.5
Dinv23157 Davidia involucrata HOM05D007115 ORTHO05D008923 1.9e-07 59.7 47 59.6
Nitab4.5_0001311g0160 Nicotiana tabacum HOM05D007115 ORTHO05D008923 1.9e-07 59.7 53 56.6
vmacro19121 Vaccinium macrocarpon HOM05D007115 ORTHO05D008923 1.9e-07 59.7 69 46.4
HPP92_023120 Vanilla planifolia HOM05D007115 ORTHO05D008923 1.9e-07 59.7 41 65.9
HanXRQChr02g0034681 Helianthus annuus HOM05D007115 ORTHO05D008923 2.4e-07 59.3 47 55.3
QL10p002688 Quercus lobata HOM05D007115 ORTHO05D008923 2.4e-07 59.3 44 65.9
ATR0790G002 Amborella trichopoda HOM05D007115 ORTHO05D008923 3.2e-07 58.9 53 56.6
CDE02G1164 Ceratophyllum demersum HOM05D007115 ORTHO05D008923 3.2e-07 58.9 53 54.7
Gohir.D11G039800 Gossypium hirsutum HOM05D007115 ORTHO05D008923 3.2e-07 58.9 55 52.7
Gohir.A11G036350 Gossypium hirsutum HOM05D007115 ORTHO05D008923 4.2e-07 58.5 55 50.9
Gorai.007G042800 Gossypium raimondii HOM05D007115 ORTHO05D008923 4.2e-07 58.5 55 50.9
Ca_16052_v3 Cicer arietinum L. HOM05D007115 ORTHO05D008923 5.5e-07 58.2 46 63.0
ECA247G2755 Erigeron canadensis HOM05D001512 ORTHO05D001574 5.5e-07 58.2 47 57.4
Hund02448 Selenicereus undatus HOM05D007115 ORTHO05D008923 5.5e-07 58.2 47 55.3
arahy.Tifrunner.gnm1.ann1.BUY811 Arachis hypogaea HOM05D007115 ORTHO05D008923 7.1e-07 57.8 55 54.5
Peaxi162Scf00089g00121 Petunia axillaris HOM05D007115 ORTHO05D008923 7.1e-07 57.8 53 54.7
PGR083G2674 Punica granatum HOM05D007115 ORTHO05D008923 7.1e-07 57.8 49 57.1
Cc04_g09720 Coffea canephora HOM05D007115 ORTHO05D008923 9.3e-07 57.4 56 51.8
Aqoxy5G03328 Aquilegia oxysepala HOM05D007115 ORTHO05D008923 1.2e-06 57.0 53 52.8
Aa31LG7G10860 Aethionema arabicum HOM05D007115 ORTHO05D008923 2.1e-06 56.2 43 65.1
arahy.Tifrunner.gnm1.ann1.YTW6SU Arachis hypogaea HOM05D007115 ORTHO05D008923 2.7e-06 55.8 55 52.7
BcaNung06011 Brassica carinata HOM05D007115 ORTHO05D008923 4.6e-06 55.1 49 57.1
Sc04g0000560 Simmondsia chinensis HOM05D007115 ORTHO05D008923 4.6e-06 55.1 55 50.9
Solyc03g019660.4 Solanum lycopersicum HOM05D007115 ORTHO05D008923 4.6e-06 55.1 53 52.8
Sopen03g029960 Solanum pennellii HOM05D007115 ORTHO05D008923 4.6e-06 55.1 53 52.8
PGSC0003DMG400015264 Solanum tuberosum HOM05D007115 ORTHO05D008923 4.6e-06 55.1 53 52.8
BolC1t01950H Brassica oleracea HOM05D007115 ORTHO05D008923 6.0e-06 54.7 49 57.1
AL7G28270 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 7.9e-06 54.3 43 60.5
Carub.0007s1613 Capsella rubella HOM05D007115 ORTHO05D008923 7.9e-06 54.3 43 60.5
CARHR232330 Cardamine hirsuta HOM05D007115 ORTHO05D008923 7.9e-06 54.3 43 60.5
Thhalv10026135m.g Eutrema salsugineum HOM05D007115 ORTHO05D008923 7.9e-06 54.3 43 60.5


User provided reference genes

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