Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G0010 Fragaria x ananassa HOM05D007049 ORTHO05D008896 1.1e-40 169.5 85 100.0
FAN18G1167 Fragaria x ananassa HOM05D007049 ORTHO05D008896 2.4e-38 161.8 83 97.6
FAN18G2563 Fragaria x ananassa HOM05D007049 ORTHO05D008896 2.4e-38 161.8 83 97.6
RcHm_v2.0_Chr7g0212661 Rosa chinensis HOM05D007049 ORTHO05D008896 4.2e-35 151.0 82 90.2
RcHm_v2.0_Chr7g0212551 Rosa chinensis HOM05D007049 ORTHO05D008896 6.0e-34 147.1 84 89.3
RcHm_v2.0_Chr7g0212501 Rosa chinensis HOM05D007049 ORTHO05D008896 9.6e-32 139.8 76 93.4
Prupe.8G009200 Prunus persica HOM05D007049 ORTHO05D008896 1.3e-31 139.4 83 84.3
FAN08G2573 Fragaria x ananassa HOM05D007049 ORTHO05D008896 4.8e-31 137.5 71 97.2
MD10G1006000 Malus domestica HOM05D007049 ORTHO05D008896 4.8e-31 137.5 83 84.3
Prupe.8G008400 Prunus persica HOM05D007049 ORTHO05D008896 8.1e-31 136.7 83 83.1
QL04p010524 Quercus lobata HOM05D007049 ORTHO05D008896 1.1e-30 136.3 80 86.2
FAN13G1882 Fragaria x ananassa HOM05D007049 ORTHO05D008896 3.4e-29 131.3 69 95.7
TWI12G1157 Tripterygium wilfordii HOM05D007049 ORTHO05D008896 7.6e-29 130.2 83 79.5
CiPaw.15G066500 Carya illinoinensis HOM05D007049 ORTHO05D008896 1.7e-28 129.0 81 80.2
CSS0000179 Camellia sinensis var. sinensis HOM05D007049 ORTHO05D008896 5.5e-27 124.0 78 79.5
Sabra01G0012500 Salix brachista HOM05D007049 ORTHO05D008896 5.5e-27 124.0 83 73.5
CANSAT25G3584 Cannabis sativa HOM05D007049 ORTHO05D008896 1.2e-26 122.9 79 81.0
Sabra01G0012700 Salix brachista HOM05D007049 ORTHO05D008896 1.6e-26 122.5 83 73.5
Cc10_g08690 Coffea canephora HOM05D007049 ORTHO05D008896 2.1e-26 122.1 80 73.8
Gohir.D13G119000 Gossypium hirsutum HOM05D007049 ORTHO05D008896 2.7e-26 121.7 76 80.3
Gorai.013G133400 Gossypium raimondii HOM05D007049 ORTHO05D008896 2.7e-26 121.7 76 80.3
Duzib177G1207 Durio zibethinus HOM05D007049 ORTHO05D008896 3.5e-26 121.3 79 77.2
Peaxi162Scf00078g00061 Petunia axillaris HOM05D007049 ORTHO05D008896 3.5e-26 121.3 81 74.1
Oeu023195.1 Olea europaea HOM05D007049 ORTHO05D008896 4.6e-26 120.9 78 78.2
Thecc.08G177900 Theobroma cacao HOM05D007049 ORTHO05D008896 4.6e-26 120.9 79 77.2
CAN.G4100.1 Capsicum annuum HOM05D007049 ORTHO05D008896 6.0e-26 120.6 81 75.3
Lalb_Chr03g0041921 Lupinus albus HOM05D007049 ORTHO05D008896 6.0e-26 120.6 79 75.9
PGSC0003DMG401002024 Solanum tuberosum HOM05D007049 ORTHO05D008896 6.0e-26 120.6 77 77.9
COL.COLO4_06913 Corchorus olitorius HOM05D007049 ORTHO05D008896 7.9e-26 120.2 76 78.9
Solyc09g007070.1 Solanum lycopersicum HOM05D007049 ORTHO05D008896 7.9e-26 120.2 77 77.9
Sopen09g001930 Solanum pennellii HOM05D007049 ORTHO05D008896 7.9e-26 120.2 77 77.9
Gohir.A13G115800 Gossypium hirsutum HOM05D007049 ORTHO05D008896 1.0e-25 119.8 76 78.9
Nitab4.5_0000213g0160 Nicotiana tabacum HOM05D007049 ORTHO05D008896 1.0e-25 119.8 81 74.1
Migut.C01376 Erythranthe guttata HOM05D007049 ORTHO05D008896 1.3e-25 119.4 78 76.9
Hma1.2p1_0400F.1_g144580 Hydrangea macrophylla HOM05D007049 ORTHO05D008896 1.3e-25 119.4 78 78.2
Nitab4.5_0000398g0030 Nicotiana tabacum HOM05D007049 ORTHO05D008896 3.0e-25 118.2 81 72.8
Phvul.002G036400 Phaseolus vulgaris HOM05D007049 ORTHO05D008896 3.0e-25 118.2 79 73.4
RcHm_v2.0_Chr6g0251481 Rosa chinensis HOM05D007049 ORTHO05D008896 3.0e-25 118.2 73 82.2
PGR042G0623 Punica granatum HOM05D007049 ORTHO05D008896 3.9e-25 117.9 80 72.5
CAN.G608.33 Capsicum annuum HOM05D007049 ORTHO05D008896 5.1e-25 117.5 75 78.7
Cpa.g.sc19.285 Carica papaya HOM05D007049 ORTHO05D008896 5.1e-25 117.5 72 83.3
Cfa019294 Carpinus fangiana HOM05D007049 ORTHO05D008896 5.1e-25 117.5 77 79.2
SalBow7G2968 Salvia bowleyana HOM05D007049 ORTHO05D008896 1.1e-24 116.3 78 73.1
TAR624G0348 Trochodendron aralioides HOM05D007049 ORTHO05D008896 1.5e-24 115.9 80 72.5
Glyma.11G013800 Glycine max HOM05D007049 ORTHO05D008896 2.5e-24 115.2 81 72.8
Rhsim08G0116100 Rhododendron simsii HOM05D007049 ORTHO05D008896 2.5e-24 115.2 75 78.7
VMungo1215G2220 Vigna mungo HOM05D007049 ORTHO05D008896 2.5e-24 115.2 82 69.5
Nn5g27287 Nelumbo nucifera HOM05D007049 ORTHO05D008896 5.6e-24 114.0 80 70.0
Sed0002937 Sechium edule HOM05D007049 ORTHO05D008896 5.6e-24 114.0 79 73.4
arahy.Tifrunner.gnm1.ann1.6H88WF Arachis hypogaea HOM05D007049 ORTHO05D008896 1.3e-23 112.8 77 71.4
arahy.Tifrunner.gnm1.ann1.CT79FY Arachis hypogaea HOM05D007049 ORTHO05D008896 1.3e-23 112.8 77 71.4
Ca_24471_v3 Cicer arietinum L. HOM05D007049 ORTHO05D008896 1.6e-23 112.5 75 72.0
Eucgr.F02581 Eucalyptus grandis HOM05D007049 ORTHO05D008896 1.6e-23 112.5 71 77.5
MBI13_g15314_MAGBIO Magnolia biondii HOM05D007049 ORTHO05D008896 1.6e-23 112.5 73 76.7
MBI13_g30327_MAGBIO Magnolia biondii HOM05D007049 ORTHO05D008896 1.6e-23 112.5 73 76.7
Aa31LG5G19930 Aethionema arabicum HOM05D007049 ORTHO05D008896 2.1e-23 112.1 77 72.7
Ah.05g168610 Amaranthus hybridus HOM05D007049 ORTHO05D008896 2.1e-23 112.1 80 70.0
Carub.0004s2178 Capsella rubella HOM05D007049 ORTHO05D008896 2.1e-23 112.1 77 74.0
TAR624G1340 Trochodendron aralioides HOM05D007049 ORTHO05D008896 2.8e-23 111.7 73 75.3
LjContig00222g0016429 Lotus japonicus HOM05D007049 ORTHO05D008896 3.7e-23 111.3 76 72.4
Os08g0278600 Oryza sativa ssp. japonica HOM05D007049 ORTHO05D008896 3.7e-23 111.3 73 72.6
DCAR_017595 Daucus carota HOM05D007049 ORTHO05D008896 4.8e-23 110.9 79 69.6
CARHR134570 Cardamine hirsuta HOM05D007049 ORTHO05D008896 8.2e-23 110.2 77 71.4
DCAR_006853 Daucus carota HOM05D007049 ORTHO05D008896 8.2e-23 110.2 79 69.6
Psat2g187280 Pisum sativum HOM05D007049 ORTHO05D008896 1.1e-22 109.8 76 72.4
AL4G37190 Arabidopsis lyrata HOM05D007049 ORTHO05D008896 1.4e-22 109.4 77 71.4
Psat7g180160 Pisum sativum HOM05D007049 ORTHO05D008896 1.4e-22 109.4 76 72.4
TPR.G37942 Trifolium pratense HOM05D007049 ORTHO05D008896 2.4e-22 108.6 74 70.3
Medtr5g008340 Medicago truncatula HOM05D007049 ORTHO05D008896 4.0e-22 107.8 74 71.6
Psat7g180120 Pisum sativum HOM05D007049 ORTHO05D008896 4.0e-22 107.8 76 71.1
THA.LOC104824284 Tarenaya hassleriana HOM05D007049 ORTHO05D008896 4.0e-22 107.8 76 72.4
EL10Ac7g16149 Beta vulgaris HOM05D007049 ORTHO05D008896 6.9e-22 107.1 72 72.2
ECA248G1776 Erigeron canadensis HOM05D007049 ORTHO05D008896 1.2e-21 106.3 80 67.5
AT2G39725 Arabidopsis thaliana HOM05D007049 ORTHO05D008896 1.5e-21 105.9 77 70.1
CsaV3_5G039970 Cucumis sativus L. HOM05D007049 ORTHO05D008896 1.5e-21 105.9 71 73.2
HanXRQChr10g0289041 Helianthus annuus HOM05D007049 ORTHO05D008896 1.5e-21 105.9 78 69.2
Sc20g0003280 Simmondsia chinensis HOM05D007049 ORTHO05D008896 1.5e-21 105.9 64 81.2
Prupe.8G009100 Prunus persica HOM05D007049 ORTHO05D008896 2.0e-21 105.5 83 68.7
MELO3C022175.2 Cucumis melo HOM05D007049 ORTHO05D008896 2.6e-21 105.1 71 73.2
PSO017G7166 Papaver somniferum HOM05D007049 ORTHO05D008896 3.4e-21 104.8 65 81.5
Thhalv10017481m.g Eutrema salsugineum HOM05D007049 ORTHO05D008896 4.5e-21 104.4 77 67.5
BcaC02g07431 Brassica carinata HOM05D007049 ORTHO05D008896 5.8e-21 104.0 73 69.9
C04p67530 Brassica napus HOM05D007049 ORTHO05D008896 5.8e-21 104.0 73 69.9
AUR62022356 Chenopodium quinoa HOM05D007049 ORTHO05D008896 5.8e-21 104.0 78 64.1
AUR62034352 Chenopodium quinoa HOM05D007049 ORTHO05D008896 5.8e-21 104.0 78 64.1
Psat7g180080 Pisum sativum HOM05D007049 ORTHO05D008896 5.8e-21 104.0 76 68.4
Ciclev10023082m.g Citrus clementina HOM05D007049 ORTHO05D008896 7.6e-21 103.6 68 76.5
unitig_46.g17984 Utricularia gibba HOM05D007049 ORTHO05D008896 7.6e-21 103.6 76 72.4
ClCG08G001090 Citrullus lanatus HOM05D007049 ORTHO05D008896 1.3e-20 102.8 72 72.2
Prupe.8G008800 Prunus persica HOM05D007049 ORTHO05D008896 1.7e-20 102.4 62 83.9
HanXRQChr04g0114811 Helianthus annuus HOM05D007049 ORTHO05D008896 4.9e-20 100.9 78 65.4
BcaB06g29104 Brassica carinata HOM05D007049 ORTHO05D008896 8.4e-20 100.1 74 68.9
BolC4t28250H Brassica oleracea HOM05D007049 ORTHO05D008896 8.4e-20 100.1 74 68.9
A04p30310 Brassica napus HOM05D007049 ORTHO05D008896 1.1e-19 99.8 74 68.9
BraA04t18476Z Brassica rapa HOM05D007049 ORTHO05D008896 1.9e-19 99.0 74 67.6
Psat7g195680 Pisum sativum HOM05D007049 ORTHO05D008896 2.5e-19 98.6 76 68.4
Aqoxy3G02546 Aquilegia oxysepala HOM05D007049 ORTHO05D008896 4.2e-19 97.8 67 70.1
Sp4g21990 Schrenkiella parvula HOM05D007049 ORTHO05D008896 5.5e-19 97.4 76 65.8
Zm00001eb026180 Zea mays HOM05D007049 ORTHO05D008896 1.6e-18 95.9 78 60.3
ATR0057G071 Amborella trichopoda HOM05D007049 ORTHO05D008896 4.3e-16 87.8 70 61.4
HPP92_017350 Vanilla planifolia HOM05D007049 ORTHO05D008896 3.7e-15 84.7 73 57.5
SGA_v2.0_scaffold118G32610 Striga asiatica HOM05D007049 ORTHO05D008896 1.8e-14 82.4 56 73.2
Manes.01G011600 Manihot esculenta HOM05D007049 ORTHO05D008896 2.4e-14 82.0 53 77.4
Potri.001G018100 Populus trichocarpa HOM05D007049 ORTHO05D008896 5.3e-14 80.9 51 80.4
SHI21473 Sapria himalayana HOM05D000105 ORTHO05D000023 2.0e-13 79.0 56 67.9
SMO353G0203 Selaginella moellendorffii HOM05D007049 ORTHO05D008896 2.2e-12 75.5 67 56.7
MD05G1008200 Malus domestica HOM05D007049 ORTHO05D008896 1.9e-11 72.4 49 75.5
Pp3c4_6780 Physcomitrium patens HOM05D007049 ORTHO05D008896 9.4e-11 70.1 68 58.8
Mapoly0004s0187 Marchantia polymorpha HOM05D007049 ORTHO05D008896 1.8e-09 65.9 72 50.0
Lsat_1_v5_gn_1_45401 Lactuca sativa HOM05D007049 ORTHO05D008896 5.7e-08 60.8 50 58.0
Solyc04g077110.3 Solanum lycopersicum HOM05D007049 ORTHO05D008896 6.9e-06 53.9 36 72.2


User provided reference genes

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