Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G3508 Fragaria x ananassa HOM05D000003 ORTHO05D017879 7.1e-141 503.8 239 100.0
FAN01G2490 Fragaria x ananassa HOM05D000003 ORTHO05D017879 1.3e-41 174.1 84 97.6
FvH4_1g17821 Fragaria vesca HOM05D000003 ORTHO05D046457 1.0e-38 164.5 90 83.3
FvH4_6g23032 Fragaria vesca HOM05D000003 ORTHO05D017879 3.1e-35 152.9 91 80.2
FvH4_5g18751 Fragaria vesca HOM05D000003 ORTHO05D017879 9.0e-35 151.4 86 83.7
FvH4_2g05763 Fragaria vesca HOM05D000003 ORTHO05D000004 4.2e-16 89.4 237 25.3
FvH4_2g11841 Fragaria vesca HOM05D000003 ORTHO05D000004 4.6e-15 85.9 190 26.3
COL.COLO4_25140 Corchorus olitorius HOM05D000003 ORTHO05D017879 2.8e-12 76.6 157 29.9
RcHm_v2.0_Chr7g0210911 Rosa chinensis HOM05D000003 ORTHO05D000004 2.8e-12 76.6 202 25.2
COL.COLO4_30332 Corchorus olitorius HOM05D004831 ORTHO05D003975 4.8e-12 75.9 171 27.5
Prupe.2G060500 Prunus persica HOM05D000003 ORTHO05D000004 1.1e-11 74.7 249 25.3
RcHm_v2.0_Chr1g0334101 Rosa chinensis HOM05D000005 ORTHO05D000012 3.1e-11 73.2 67 43.3
Prupe.6G087800 Prunus persica HOM05D000003 ORTHO05D000004 5.3e-11 72.4 239 25.5
FvH4_2g04611 Fragaria vesca HOM05D000003 ORTHO05D000004 1.2e-10 71.2 90 36.7
FvH4_6g16031 Fragaria vesca HOM05D000003 ORTHO05D009449 1.2e-10 71.2 206 27.7
Prupe.1G202000 Prunus persica HOM05D000003 ORTHO05D000004 3.4e-10 69.7 200 26.5
FvH4_5g15942 Fragaria vesca HOM05D000003 ORTHO05D000004 5.9e-10 68.9 147 34.7
FvH4_5g33581 Fragaria vesca HOM05D008133 ORTHO05D009449 2.2e-09 67.0 57 45.6
COL.COLO4_04272 Corchorus olitorius HOM05D000003 ORTHO05D000004 3.8e-09 66.2 101 30.7
Rhsim04G0047200 Rhododendron simsii HOM05D000003 ORTHO05D000004 6.5e-09 65.5 165 26.1
FvH4_4g10365 Fragaria vesca HOM05D000003 ORTHO05D017879 8.5e-09 65.1 87 34.5
FvH4_5g08801 Fragaria vesca HOM05D000003 ORTHO05D000004 1.1e-08 64.7 114 30.7
COL.COLO4_13287 Corchorus olitorius HOM05D000003 ORTHO05D000126 3.2e-08 63.2 67 38.8
COL.COLO4_15019 Corchorus olitorius HOM05D000003 ORTHO05D000004 3.2e-08 63.2 90 34.4
COL.COLO4_29577 Corchorus olitorius HOM05D000003 ORTHO05D000004 3.2e-08 63.2 67 38.8
FvH4_6g11612 Fragaria vesca HOM05D000003 ORTHO05D000004 7.2e-08 62.0 100 29.0
FAN27G2293 Fragaria x ananassa HOM05D000003 ORTHO05D017879 1.2e-07 61.2 83 38.6
COL.COLO4_18924 Corchorus olitorius HOM05D000003 ORTHO05D009449 3.6e-07 59.7 74 36.5
COL.COLO4_07290 Corchorus olitorius HOM05D000003 ORTHO05D000004 4.6e-07 59.3 68 36.8
FvH4_3g35051 Fragaria vesca HOM05D000003 ORTHO05D000004 6.1e-07 58.9 73 42.5
FvH4_1g29601 Fragaria vesca HOM05D000003 ORTHO05D000004 7.9e-07 58.5 90 34.4
Prupe.6G158500 Prunus persica HOM05D000003 ORTHO05D000004 7.9e-07 58.5 90 31.1
TWI31G0724 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 7.9e-07 58.5 101 34.7
Prupe.8G042700 Prunus persica HOM05D000003 ORTHO05D009449 1.4e-06 57.8 76 38.2
RcHm_v2.0_Chr1g0344541 Rosa chinensis HOM05D000003 ORTHO05D000004 1.4e-06 57.8 106 34.0
AUR62005341 Chenopodium quinoa HOM05D000003 ORTHO05D000004 1.8e-06 57.4 251 22.3
COL.COLO4_35856 Corchorus olitorius HOM05D000003 ORTHO05D000004 1.8e-06 57.4 73 32.9
FvH4_5g35622 Fragaria vesca HOM05D000003 ORTHO05D014221 1.8e-06 57.4 154 24.7
FAN20G0123 Fragaria x ananassa HOM05D000003 ORTHO05D017879 1.8e-06 57.4 54 44.4
RcHm_v2.0_Chr6g0277111 Rosa chinensis HOM05D000003 ORTHO05D000004 1.8e-06 57.4 87 32.2
TAR256G0001 Trochodendron aralioides HOM05D000003 ORTHO05D000004 1.8e-06 57.4 212 22.6
RcHm_v2.0_Chr5g0040851 Rosa chinensis HOM05D000003 ORTHO05D000004 2.3e-06 57.0 106 34.0
FvH4_2g13581 Fragaria vesca HOM05D000003 ORTHO05D000004 3.0e-06 56.6 139 28.1
FvH4_3g28461 Fragaria vesca HOM05D000003 ORTHO05D014631 3.0e-06 56.6 118 31.4
FvH4_4g05481 Fragaria vesca HOM05D008133 ORTHO05D009449 3.9e-06 56.2 74 39.2
Prupe.1G283700 Prunus persica HOM05D008133 ORTHO05D009449 3.9e-06 56.2 68 41.2
QL11p009033 Quercus lobata HOM05D000003 ORTHO05D000004 5.1e-06 55.8 99 29.3
COL.COLO4_08607 Corchorus olitorius HOM05D000003 ORTHO05D000004 6.7e-06 55.5 90 27.8
FvH4_7g01171 Fragaria vesca HOM05D000003 ORTHO05D000004 8.8e-06 55.1 91 30.8


User provided reference genes

Program Settings