Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G3457 Fragaria x ananassa HOM05D005676 ORTHO05D007375 2.7e-172 608.6 320 100.0
FAN06G4290 Fragaria x ananassa HOM05D005676 ORTHO05D007375 4.0e-107 392.1 334 68.6
FvH4_7g16470 Fragaria vesca HOM05D005676 ORTHO05D007375 9.0e-107 391.0 334 68.3
FAN06G1134 Fragaria x ananassa HOM05D005676 ORTHO05D007375 1.2e-106 390.6 334 68.3
FAN10G1066 Fragaria x ananassa HOM05D005676 ORTHO05D007375 1.3e-105 387.1 335 68.1
FAN10G0710 Fragaria x ananassa HOM05D005676 ORTHO05D007375 2.9e-105 386.0 335 67.8
FAN03G1248 Fragaria x ananassa HOM05D005676 ORTHO05D007375 7.1e-104 381.3 335 66.9
FAN06G2271 Fragaria x ananassa HOM05D005676 ORTHO05D007375 5.9e-98 361.7 279 74.6
RcHm_v2.0_Chr1g0359591 Rosa chinensis HOM05D005676 ORTHO05D007375 6.9e-91 338.2 330 60.9
Prupe.2G189000 Prunus persica HOM05D005676 ORTHO05D007375 2.0e-53 213.8 358 45.5
FvH4_7g16531 Fragaria vesca HOM05D005676 ORTHO05D007375 2.3e-46 190.3 110 90.0
MD01G1081300 Malus domestica HOM05D005676 ORTHO05D007375 3.7e-44 183.0 343 40.8
MD07G1150200 Malus domestica HOM05D005676 ORTHO05D007375 1.4e-38 164.5 322 41.6
FAN06G1105 Fragaria x ananassa HOM05D005676 ORTHO05D007375 2.3e-33 147.1 139 61.9
FvH4_7g16560 Fragaria vesca HOM05D005676 ORTHO05D007375 3.9e-33 146.4 139 61.2
Cfa003798 Carpinus fangiana HOM05D005676 ORTHO05D007375 6.4e-28 129.0 356 34.8
Haze_15661 Corylus avellana HOM05D005676 ORTHO05D007375 6.4e-28 129.0 357 34.2
CiPaw.02G041000 Carya illinoinensis HOM05D005676 ORTHO05D007375 7.1e-27 125.6 347 33.1
Atru.chr5.673 Acer truncatum HOM05D005676 ORTHO05D007375 2.5e-24 117.1 353 31.7
Sed0007378 Sechium edule HOM05D005676 ORTHO05D007375 2.5e-24 117.1 336 33.0
Thecc.01G342000 Theobroma cacao HOM05D005676 ORTHO05D007375 8.1e-23 112.1 361 30.7
PGR031G0643 Punica granatum HOM05D005676 ORTHO05D007375 3.1e-22 110.2 240 34.6
Gohir.D11G101600 Gossypium hirsutum HOM05D005676 ORTHO05D007375 6.8e-22 109.0 361 31.6
Cpa.g.sc96.24 Carica papaya HOM05D005676 ORTHO05D007375 2.6e-21 107.1 350 32.6
Gohir.A11G096900 Gossypium hirsutum HOM05D005676 ORTHO05D007375 7.6e-21 105.5 360 31.7
QL04p060782 Quercus lobata HOM05D005676 ORTHO05D007375 1.3e-20 104.8 354 29.4
Nn1g00247 Nelumbo nucifera HOM05D005676 ORTHO05D007375 2.9e-20 103.6 222 36.5
Gorai.007G108400 Gossypium raimondii HOM05D005676 ORTHO05D007375 4.9e-20 102.8 361 31.6
ClCG05G000790 Citrullus lanatus HOM05D005676 ORTHO05D007375 6.4e-20 102.4 347 30.0
COL.COLO4_06282 Corchorus olitorius HOM05D005676 ORTHO05D007375 6.4e-20 102.4 356 29.5
Aqoxy7G00081 Aquilegia oxysepala HOM05D005676 ORTHO05D007375 1.2e-18 98.2 244 34.8
MELO3C006021.2 Cucumis melo HOM05D005676 ORTHO05D007375 1.2e-18 98.2 216 34.7
Dinv32595 Davidia involucrata HOM05D005676 ORTHO05D007375 1.2e-18 98.2 146 42.5
Oeu043238.1 Olea europaea HOM05D005676 ORTHO05D007375 1.2e-18 98.2 195 40.5
Ciclev10023383m.g Citrus clementina HOM05D005676 ORTHO05D007375 6.0e-18 95.9 357 30.8
Duzib268G0021 Durio zibethinus HOM05D005676 ORTHO05D007375 1.3e-17 94.7 385 28.1
CsaV3_3G008030 Cucumis sativus L. HOM05D005676 ORTHO05D007375 1.7e-17 94.4 216 34.7
CSS0030996 Camellia sinensis var. sinensis HOM05D005676 ORTHO05D007375 3.9e-17 93.2 165 41.8
Potri.014G099100 Populus trichocarpa HOM05D005676 ORTHO05D007375 3.9e-17 93.2 390 27.2
TAR636G2851 Trochodendron aralioides HOM05D005676 ORTHO05D007375 5.1e-17 92.8 222 34.7
Hma1.2p1_0139F.1_g063260 Hydrangea macrophylla HOM05D005676 ORTHO05D007375 1.1e-16 91.7 209 36.8
Carub.0005s2852 Capsella rubella HOM05D005676 ORTHO05D007375 7.3e-16 89.0 232 35.3
Manes.01G246200 Manihot esculenta HOM05D005676 ORTHO05D007375 9.6e-16 88.6 214 32.2
AL5G44340 Arabidopsis lyrata HOM05D005676 ORTHO05D007375 2.1e-15 87.4 244 32.8
MSTRG.17345 Avicennia marina HOM05D005676 ORTHO05D007375 2.1e-15 87.4 243 33.3
THA.LOC104817362 Tarenaya hassleriana HOM05D005676 ORTHO05D007375 2.8e-15 87.0 272 30.9
Migut.B01876 Erythranthe guttata HOM05D005676 ORTHO05D007375 3.6e-15 86.7 276 29.3
A07p25740 Brassica napus HOM05D005676 ORTHO05D007375 8.1e-15 85.5 222 35.1
BraA07t30214Z Brassica rapa HOM05D005676 ORTHO05D007375 8.1e-15 85.5 222 35.1
Actinidia10141 Actinidia chinensis HOM05D005676 ORTHO05D007375 1.1e-14 85.1 122 45.9
BcaC08g45161 Brassica carinata HOM05D005676 ORTHO05D007375 1.1e-14 85.1 222 35.6
C06p27960 Brassica napus HOM05D005676 ORTHO05D007375 1.1e-14 85.1 222 35.6
BolC6t37957H Brassica oleracea HOM05D005676 ORTHO05D007375 1.1e-14 85.1 222 35.6
SalBow6G4948 Salvia bowleyana HOM05D005676 ORTHO05D007375 1.1e-14 85.1 305 28.9
HanXRQChr11g0352981 Helianthus annuus HOM05D005676 ORTHO05D007375 2.4e-14 84.0 291 31.6
MBI06_g46583_MAGBIO Magnolia biondii HOM05D005676 ORTHO05D007375 2.4e-14 84.0 255 30.2
Aa31LG10G15770 Aethionema arabicum HOM05D005676 ORTHO05D007375 3.1e-14 83.6 297 32.3
Sabra14G0072700 Salix brachista HOM05D005676 ORTHO05D007375 3.1e-14 83.6 273 30.8
Peaxi162Scf00786g00018 Petunia axillaris HOM05D005676 ORTHO05D007375 5.2e-14 82.8 246 28.5
Lj9A598G65 Lonicera japonica HOM05D005676 ORTHO05D007375 9.0e-14 82.0 329 28.0
Eucgr.D02379 Eucalyptus grandis HOM05D005676 ORTHO05D007375 1.5e-13 81.3 248 32.7
Sp5g01590 Schrenkiella parvula HOM05D005676 ORTHO05D007375 1.5e-13 81.3 227 33.0
Nitab4.5_0000172g0490 Nicotiana tabacum HOM05D005676 ORTHO05D007375 2.0e-13 80.9 98 43.9
Solyc01g096010.4 Solanum lycopersicum HOM05D005676 ORTHO05D007375 3.4e-13 80.1 98 44.9
Sopen01g039730 Solanum pennellii HOM05D005676 ORTHO05D007375 4.4e-13 79.7 98 44.9
PGSC0003DMG400000228 Solanum tuberosum HOM05D005676 ORTHO05D007375 4.4e-13 79.7 98 44.9
Cc02_g39430 Coffea canephora HOM05D005676 ORTHO05D007375 5.8e-13 79.3 125 40.8
Lsat_1_v5_gn_3_140321 Lactuca sativa HOM05D005676 ORTHO05D007375 7.6e-13 79.0 279 29.7
Thhalv10005757m.g Eutrema salsugineum HOM05D005676 ORTHO05D007375 1.7e-12 77.8 235 32.8
Lj3g0008614 Lotus japonicus HOM05D005676 ORTHO05D007375 1.7e-12 77.8 234 33.3
ECA246G1832 Erigeron canadensis HOM05D000467 ORTHO05D000379 2.2e-12 77.4 180 35.0
Oeu007893.1 Olea europaea HOM05D005676 ORTHO05D007375 2.9e-12 77.0 141 35.5
AT3G61780 Arabidopsis thaliana HOM05D005676 ORTHO05D007375 4.9e-12 76.3 230 33.0
Actinidia20244 Actinidia chinensis HOM05D005676 ORTHO05D007375 6.4e-12 75.9 89 52.8
SalBow3G4648 Salvia bowleyana HOM05D005676 ORTHO05D007375 6.4e-12 75.9 106 43.4
SGA_v2.0_scaffold5G03020 Striga asiatica HOM05D005676 ORTHO05D007375 6.4e-12 75.9 229 30.6
arahy.Tifrunner.gnm1.ann1.FH2LCI Arachis hypogaea HOM05D005676 ORTHO05D007375 1.4e-11 74.7 184 33.7
CARHR172110 Cardamine hirsuta HOM05D005676 ORTHO05D007375 1.9e-11 74.3 291 32.6
AUR62023455 Chenopodium quinoa HOM05D005676 ORTHO05D007375 1.9e-11 74.3 116 42.2
arahy.Tifrunner.gnm1.ann1.L1WQQA Arachis hypogaea HOM05D005676 ORTHO05D007375 3.2e-11 73.6 186 33.3
TPR.G16793 Trifolium pratense HOM05D005676 ORTHO05D007375 3.2e-11 73.6 157 33.8
Ca_23531_v3 Cicer arietinum L. HOM05D005676 ORTHO05D007375 4.2e-11 73.2 149 36.2
Nitab4.5_0013740g0030 Nicotiana tabacum HOM05D005676 ORTHO05D007375 4.2e-11 73.2 275 26.5
BcaC08g45164 Brassica carinata HOM05D005676 ORTHO05D007375 5.4e-11 72.8 120 40.0
CAN.G1415.28 Capsicum annuum HOM05D005676 ORTHO05D007375 1.2e-10 71.6 88 43.2
Lalb_Chr17g0342721 Lupinus albus HOM05D005676 ORTHO05D007375 2.1e-10 70.9 163 35.6
AUR62004498 Chenopodium quinoa HOM05D005676 ORTHO05D007375 2.7e-10 70.5 116 40.5
Glyma.16G024100 Glycine max HOM05D005676 ORTHO05D007375 2.7e-10 70.5 152 37.5
VMungo0331G0849 Vigna mungo HOM05D005676 ORTHO05D007375 4.6e-10 69.7 168 38.1
DCAR_005392 Daucus carota HOM05D005676 ORTHO05D007375 6.0e-10 69.3 81 45.7
Ah.05g179510 Amaranthus hybridus HOM05D005676 ORTHO05D007375 1.3e-09 68.2 77 48.1
Hund16716 Selenicereus undatus HOM05D005676 ORTHO05D007375 1.3e-09 68.2 165 33.3
Phvul.010G114600 Phaseolus vulgaris HOM05D005676 ORTHO05D007375 6.6e-09 65.9 174 36.8
GSVIVG01027152001 Vitis vinifera HOM05D005676 ORTHO05D007375 8.7e-09 65.5 300 30.0
CDE02G4093 Ceratophyllum demersum HOM05D005676 ORTHO05D007375 1.5e-08 64.7 191 29.3
Sc01g0002640 Simmondsia chinensis HOM05D005676 ORTHO05D007375 2.5e-08 63.9 159 34.0
ATR0602G016 Amborella trichopoda HOM05D005676 ORTHO05D007375 3.3e-08 63.5 77 45.5
unitig_899.g14797 Utricularia gibba HOM05D005676 ORTHO05D007375 3.3e-08 63.5 226 30.5
Psat4g161440 Pisum sativum HOM05D005676 ORTHO05D007375 7.3e-08 62.4 151 32.5
EL10Ac1g00264 Beta vulgaris HOM05D005676 ORTHO05D007375 1.6e-07 61.2 209 30.6
Medtr8g027605 Medicago truncatula HOM05D005676 ORTHO05D007375 1.1e-06 58.5 427 23.7


User provided reference genes

Program Settings