Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G3370 Fragaria x ananassa HOM05D007649 ORTHO05D009668 1.4e-51 206.1 108 100.0
FAN10G0583 Fragaria x ananassa HOM05D007649 ORTHO05D009668 1.1e-43 179.9 126 80.2
FvH4_7g03290 Fragaria vesca HOM05D007649 ORTHO05D009668 6.7e-30 134.0 108 75.9
FAN06G3614 Fragaria x ananassa HOM05D007649 ORTHO05D009668 1.2e-18 96.7 51 100.0
RcHm_v2.0_Chr1g0325561 Rosa chinensis HOM05D007649 ORTHO05D009668 4.5e-18 94.7 107 60.7
Prupe.1G464700 Prunus persica HOM05D007649 ORTHO05D009668 1.2e-15 86.7 103 54.4
GSVIVG01035747001 Vitis vinifera HOM05D007649 ORTHO05D009668 2.1e-15 85.9 104 49.0
Atru.chr7.2308 Acer truncatum HOM05D007649 ORTHO05D009668 6.7e-14 80.9 107 51.4
CiPaw.08G016800 Carya illinoinensis HOM05D007649 ORTHO05D009668 2.6e-13 79.0 104 47.1
Prupe.3G140100 Prunus persica HOM05D007649 ORTHO05D009668 3.3e-13 78.6 47 85.1
MD08G1134800 Malus domestica HOM05D007649 ORTHO05D009668 1.3e-12 76.6 104 48.1
QL12p031020 Quercus lobata HOM05D007649 ORTHO05D009668 1.7e-12 76.3 104 47.1
Duzib150G1676 Durio zibethinus HOM05D007649 ORTHO05D009668 6.3e-12 74.3 105 46.7
Nn2g11782 Nelumbo nucifera HOM05D007649 ORTHO05D009668 1.8e-11 72.8 92 47.8
CANSAT25G0191 Cannabis sativa HOM05D007649 ORTHO05D009668 2.4e-11 72.4 104 45.2
PGR044G0128 Punica granatum HOM05D007649 ORTHO05D009668 3.1e-11 72.0 104 44.2
Cc08_g08160 Coffea canephora HOM05D007649 ORTHO05D009668 9.1e-11 70.5 105 40.0
Cpa.g.sc205.32 Carica papaya HOM05D007649 ORTHO05D009668 1.6e-10 69.7 105 42.9
Dinv30235 Davidia involucrata HOM05D007649 ORTHO05D009668 1.6e-10 69.7 104 45.2
Gohir.D07G028200 Gossypium hirsutum HOM05D007649 ORTHO05D009668 2.6e-10 68.9 108 44.4
Gorai.001G029500 Gossypium raimondii HOM05D007649 ORTHO05D009668 2.6e-10 68.9 108 44.4
Potri.006G245100 Populus trichocarpa HOM05D007649 ORTHO05D009668 7.7e-10 67.4 103 42.7
Haze_21646 Corylus avellana HOM05D007649 ORTHO05D009668 1.0e-09 67.0 105 44.8
HanXRQChr10g0313021 Helianthus annuus HOM05D007649 ORTHO05D009668 1.3e-09 66.6 103 41.7
CARHR187800 Cardamine hirsuta HOM05D007649 ORTHO05D009668 2.2e-09 65.9 110 43.6
TPR.G12493 Trifolium pratense HOM05D007649 ORTHO05D009668 2.2e-09 65.9 90 47.8
Actinidia13297 Actinidia chinensis HOM05D007649 ORTHO05D009668 2.9e-09 65.5 109 45.0
Manes.16G069200 Manihot esculenta HOM05D007649 ORTHO05D009668 3.8e-09 65.1 104 45.2
Duzib168G0100 Durio zibethinus HOM05D007649 ORTHO05D009668 5.0e-09 64.7 108 43.5
Glyma.04G073400 Glycine max HOM05D007649 ORTHO05D009668 6.5e-09 64.3 89 43.8
Lj1g0000027 Lotus japonicus HOM05D007649 ORTHO05D009668 8.5e-09 63.9 94 42.6
Medtr3g108310 Medicago truncatula HOM05D007649 ORTHO05D009668 8.5e-09 63.9 100 42.0
Psat5g025760 Pisum sativum HOM05D007649 ORTHO05D009668 8.5e-09 63.9 90 45.6
vmacro05350 Vaccinium macrocarpon HOM05D007649 ORTHO05D009668 8.5e-09 63.9 48 66.7
CsaV3_3G046810 Cucumis sativus L. HOM05D007649 ORTHO05D009668 1.1e-08 63.5 86 46.5
Nitab4.5_0012591g0010 Nicotiana tabacum HOM05D007649 ORTHO05D009668 1.1e-08 63.5 90 40.0
Carub.0006s2344 Capsella rubella HOM05D007649 ORTHO05D009668 1.5e-08 63.2 106 43.4
CDE05G1266 Ceratophyllum demersum HOM05D007649 ORTHO05D009668 1.5e-08 63.2 107 44.9
ECA233G5733 Erigeron canadensis HOM05D007649 ORTHO05D009668 1.5e-08 63.2 103 38.8
Nitab4.5_0000250g0070 Nicotiana tabacum HOM05D007649 ORTHO05D009668 1.5e-08 63.2 90 40.0
Potri.012G125000 Populus trichocarpa HOM05D007649 ORTHO05D009668 1.5e-08 63.2 103 41.7
C02p59430 Brassica napus HOM05D007649 ORTHO05D009668 1.9e-08 62.8 106 43.4
AL6G37400 Arabidopsis lyrata HOM05D007649 ORTHO05D009668 2.5e-08 62.4 110 41.8
arahy.Tifrunner.gnm1.ann1.0NF80D Arachis hypogaea HOM05D007649 ORTHO05D009668 2.5e-08 62.4 100 46.0
arahy.Tifrunner.gnm1.ann1.3N1A5Y Arachis hypogaea HOM05D007649 ORTHO05D009668 2.5e-08 62.4 100 46.0
PGSC0003DMG400014488 Solanum tuberosum HOM05D007649 ORTHO05D009668 2.5e-08 62.4 53 52.8
AT5G25570 Arabidopsis thaliana HOM05D007649 ORTHO05D009668 3.2e-08 62.0 110 41.8
ClCG05G017300 Citrullus lanatus HOM05D007649 ORTHO05D009668 3.2e-08 62.0 86 45.3
Thhalv10005188m.g Eutrema salsugineum HOM05D007649 ORTHO05D009668 3.2e-08 62.0 109 42.2
BolC2t12006H Brassica oleracea HOM05D007649 ORTHO05D009668 5.5e-08 61.2 55 58.2
SalBow4G3148 Salvia bowleyana HOM05D007649 ORTHO05D009668 5.5e-08 61.2 91 40.7
Sopen08g021900 Solanum pennellii HOM05D007649 ORTHO05D009668 5.5e-08 61.2 90 40.0
TWI63G0355 Tripterygium wilfordii HOM05D007649 ORTHO05D009668 5.5e-08 61.2 104 39.4
CAN.G1384.1 Capsicum annuum HOM05D007649 ORTHO05D009668 9.4e-08 60.5 100 38.0
TAR383G0510 Trochodendron aralioides HOM05D007649 ORTHO05D009668 9.4e-08 60.5 102 43.1
A06p36270 Brassica napus HOM05D007649 ORTHO05D009668 1.2e-07 60.1 108 40.7
BraA06t26549Z Brassica rapa HOM05D007649 ORTHO05D009668 1.2e-07 60.1 108 40.7
MELO3C003657.2 Cucumis melo HOM05D007649 ORTHO05D009668 1.2e-07 60.1 107 42.1
Lsat_1_v5_gn_6_8481 Lactuca sativa HOM05D007649 ORTHO05D009668 1.6e-07 59.7 104 37.5
Oeu033993.1 Olea europaea HOM05D007649 ORTHO05D009668 1.6e-07 59.7 55 50.9
Oeu033995.1 Olea europaea HOM05D007649 ORTHO05D009668 1.6e-07 59.7 55 50.9
Sc09g0008910 Simmondsia chinensis HOM05D007649 ORTHO05D009668 1.6e-07 59.7 91 37.4
EL10Ac2g02528 Beta vulgaris HOM05D007649 ORTHO05D009668 2.1e-07 59.3 91 37.4
Sabra06G0191900 Salix brachista HOM05D007649 ORTHO05D009668 2.1e-07 59.3 73 42.5
Rhsim07G0149600 Rhododendron simsii HOM05D007649 ORTHO05D009668 2.7e-07 58.9 53 54.7
Sp2g21960 Schrenkiella parvula HOM05D007649 ORTHO05D009668 2.7e-07 58.9 111 41.4
Ah.12g060320 Amaranthus hybridus HOM05D007649 ORTHO05D009668 4.7e-07 58.2 85 38.8
BolC7t44754H Brassica oleracea HOM05D007649 ORTHO05D009668 4.7e-07 58.2 124 36.3
CSS0042406 Camellia sinensis var. sinensis HOM05D007649 ORTHO05D009668 4.7e-07 58.2 55 52.7
Migut.N01074 Erythranthe guttata HOM05D007649 ORTHO05D009668 4.7e-07 58.2 104 41.3
Eucgr.C02878 Eucalyptus grandis HOM05D007649 ORTHO05D009668 4.7e-07 58.2 52 51.9
Glyma.06G074500 Glycine max HOM05D007649 ORTHO05D009668 6.1e-07 57.8 89 41.6
Peaxi162Scf00105g01010 Petunia axillaris HOM05D007649 ORTHO05D009668 6.1e-07 57.8 90 36.7
Phvul.009G099200 Phaseolus vulgaris HOM05D007649 ORTHO05D009668 8.0e-07 57.4 84 44.0
Hund02998 Selenicereus undatus HOM05D007649 ORTHO05D009668 8.0e-07 57.4 85 40.0
Solyc08g067980.3 Solanum lycopersicum HOM05D007649 ORTHO05D009668 8.0e-07 57.4 93 38.7
MBI04_g10458_MAGBIO Magnolia biondii HOM05D007649 ORTHO05D009668 1.0e-06 57.0 118 33.9
Ciclev10010030m.g Citrus clementina HOM05D007649 ORTHO05D009668 1.4e-06 56.6 107 39.3
PSO063G4106 Papaver somniferum HOM05D007649 ORTHO05D009668 1.4e-06 56.6 55 52.7
AUR62032390 Chenopodium quinoa HOM05D007649 ORTHO05D009668 2.3e-06 55.8 87 37.9
TWI34G1739 Tripterygium wilfordii HOM05D007649 ORTHO05D009668 2.3e-06 55.8 47 59.6
Aa31LG11G4690 Aethionema arabicum HOM05D007649 ORTHO05D009668 3.0e-06 55.5 105 42.9
AUR62024825 Chenopodium quinoa HOM05D007649 ORTHO05D009668 4.0e-06 55.1 85 37.6
Aqoxy7G01751 Aquilegia oxysepala HOM05D007649 ORTHO05D009668 6.7e-06 54.3 106 38.7
THA.LOC104799213 Tarenaya hassleriana HOM05D007649 ORTHO05D009668 6.7e-06 54.3 105 39.0


User provided reference genes

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