Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G3314 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.8e-105 384.8 187 100.0
FAN06G3025 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.1e-104 380.6 187 99.5
FAN06G1078 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.3e-104 380.2 187 98.9
FAN10G3663 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.4e-45 185.7 219 54.8
FAN21G1333 Fragaria x ananassa HOM05D000259 ORTHO05D008185 6.6e-33 144.8 222 44.6
FAN17G1816 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.1e-31 139.8 146 56.2
FAN17G0649 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.8e-31 139.4 153 50.3
FvH4_7g20381 Fragaria vesca HOM05D002813 ORTHO05D003203 4.9e-28 128.6 60 100.0
FAN03G2494 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.8e-22 108.2 140 48.6
FAN06G5037 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.5e-21 107.1 63 82.5
FvH4_6g41671 Fragaria vesca HOM05D002813 ORTHO05D003203 1.8e-14 83.6 54 72.2
FAN02G4465 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.1e-14 82.8 54 72.2
FAN09G1014 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.2e-14 82.0 189 34.4
FAN24G2117 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.8e-14 81.6 166 36.1
FvH4_2g32520 Fragaria vesca HOM05D002813 ORTHO05D003203 8.9e-14 81.3 166 36.1
QL12p041348 Quercus lobata HOM05D002813 ORTHO05D003203 1.5e-13 80.5 207 33.3
FvH4_6g15310 Fragaria vesca HOM05D002813 ORTHO05D003203 2.6e-13 79.7 182 35.7
FAN15G0916 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.4e-13 79.3 210 31.9
FAN27G1144 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.4e-13 79.3 210 31.9
Prupe.1G448200 Prunus persica HOM05D002813 ORTHO05D003203 5.8e-13 78.6 55 65.5
RcHm_v2.0_Chr6g0307031 Rosa chinensis HOM05D002813 ORTHO05D003203 9.9e-13 77.8 188 33.0
FvH4_2g35530 Fragaria vesca HOM05D002813 ORTHO05D003203 1.3e-12 77.4 149 38.9
RcHm_v2.0_Chr2g0157391 Rosa chinensis HOM05D002813 ORTHO05D003203 1.3e-12 77.4 57 66.7
FvH4_2g35000 Fragaria vesca HOM05D002813 ORTHO05D003203 2.2e-12 76.6 191 33.0
FAN27G0414 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.2e-12 76.6 62 59.7
FAN24G1750 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.9e-12 76.3 177 34.5
MD15G1093400 Malus domestica HOM05D002813 ORTHO05D003203 2.9e-12 76.3 55 65.5
GSVIVG01035624001 Vitis vinifera HOM05D002813 ORTHO05D003203 3.7e-12 75.9 184 29.9
Cc08_g09560 Coffea canephora HOM05D002813 ORTHO05D003203 4.9e-12 75.5 183 29.5
FAN05G0887 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-11 73.9 52 63.5
FAN14G0433 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-11 73.9 59 54.2
FvH4_2g32540 Fragaria vesca HOM05D002813 ORTHO05D003203 1.9e-11 73.6 184 33.2
FAN02G3770 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.9e-11 73.6 52 63.5
Gohir.A05G046700 Gossypium hirsutum HOM05D002813 ORTHO05D003203 1.9e-11 73.6 180 32.2
RcHm_v2.0_Chr6g0307021 Rosa chinensis HOM05D002813 ORTHO05D003203 2.4e-11 73.2 62 58.1
FvH4_2g34990 Fragaria vesca HOM05D002813 ORTHO05D003203 4.1e-11 72.4 62 56.5
FAN15G3400 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.1e-11 72.4 62 56.5
FAN20G0435 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.1e-11 72.4 62 56.5
FAN24G2983 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.4e-11 72.0 233 30.0
FvH4_2g32610 Fragaria vesca HOM05D002813 ORTHO05D003203 7.1e-11 71.6 233 30.0
FvH4_2g32530 Fragaria vesca HOM05D002813 ORTHO05D003203 9.2e-11 71.2 173 34.1
FAN20G2873 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-10 70.9 235 28.1
FAN27G2509 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-10 70.9 235 27.2
FAN27G3388 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-10 70.9 148 37.2
FvH4_2g34980 Fragaria vesca HOM05D002813 ORTHO05D003203 1.6e-10 70.5 188 29.3
FAN15G1653 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.6e-10 70.5 235 28.1
Gohir.D05G048500 Gossypium hirsutum HOM05D002813 ORTHO05D003203 6.0e-10 68.6 51 58.8
Gorai.009G049800 Gossypium raimondii HOM05D002813 ORTHO05D003203 6.0e-10 68.6 51 58.8
Duzib168G2404 Durio zibethinus HOM05D002813 ORTHO05D003203 1.3e-09 67.4 51 56.9
FvH4_6g10172 Fragaria vesca HOM05D002813 ORTHO05D003203 1.3e-09 67.4 158 31.6
FAN20G2689 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.3e-09 67.4 172 34.3
Mapoly0100s0050 Marchantia polymorpha HOM05D002813 ORTHO05D003203 2.3e-09 66.6 195 28.7
QL12p041353 Quercus lobata HOM05D002813 ORTHO05D003203 2.3e-09 66.6 51 58.8
FAN05G2846 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.0e-09 66.2 123 35.8
Thecc.09G045300 Theobroma cacao HOM05D002813 ORTHO05D003203 3.0e-09 66.2 51 56.9
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 5.1e-09 65.5 51 56.9
FAN01G0062 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.1e-09 65.5 46 67.4
FAN18G3569 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.1e-09 65.5 47 70.2
CiPaw.07G204200 Carya illinoinensis HOM05D002813 ORTHO05D003203 6.6e-09 65.1 55 58.2
Nn2g11622 Nelumbo nucifera HOM05D002813 ORTHO05D003203 6.6e-09 65.1 171 32.2
RcHm_v2.0_Chr6g0306251 Rosa chinensis HOM05D002813 ORTHO05D003203 6.6e-09 65.1 52 51.9
FvH4_2g32590 Fragaria vesca HOM05D002813 ORTHO05D003203 8.6e-09 64.7 180 32.2
FAN18G3812 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.6e-09 64.7 40 75.0
FAN24G0821 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.6e-09 64.7 180 32.2
Ciclev10003718m.g Citrus clementina HOM05D002813 ORTHO05D003203 1.1e-08 64.3 131 35.9
FAN10G2587 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.5e-08 63.9 46 65.2
FAN10G3741 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.5e-08 63.9 46 65.2
Sc23g0005220 Simmondsia chinensis HOM05D002813 ORTHO05D003203 1.5e-08 63.9 237 27.4
FAN27G1770 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.5e-08 63.2 55 54.5
FvH4_5g19260 Fragaria vesca HOM05D002813 ORTHO05D003203 4.3e-08 62.4 52 55.8
FAN18G2037 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.3e-08 62.4 52 55.8
FAN20G2926 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.3e-08 62.4 183 30.1
MSTRG.9106 Avicennia marina HOM05D002813 ORTHO05D003203 5.6e-08 62.0 192 30.2
FvH4_2g32630 Fragaria vesca HOM05D002813 ORTHO05D003203 5.6e-08 62.0 182 32.4
QL12p041358 Quercus lobata HOM05D002813 ORTHO05D003203 5.6e-08 62.0 51 56.9
FAN26G1940 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.6e-08 61.2 55 50.9
RcHm_v2.0_Chr5g0073471 Rosa chinensis HOM05D002813 ORTHO05D003203 9.6e-08 61.2 45 62.2
FAN06G4596 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-07 60.8 46 60.9
FAN09G1972 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-07 60.8 49 55.1
FAN04G3192 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.6e-07 60.5 196 28.1
FAN11G2625 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.6e-07 60.5 169 34.3
FAN15G1401 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.6e-07 60.5 182 29.7
FAN14G4337 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.1e-07 60.1 49 53.1
FAN28G0350 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.1e-07 60.1 55 49.1
Eucgr.C02935 Eucalyptus grandis HOM05D002813 ORTHO05D003203 2.8e-07 59.7 52 61.5
PGSC0003DMG400002228 Solanum tuberosum HOM05D002813 ORTHO05D003203 2.8e-07 59.7 199 25.1
Ciclev10010367m.g Citrus clementina HOM05D002813 ORTHO05D003203 4.7e-07 58.9 55 50.9
FAN04G1334 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.7e-07 58.9 74 43.2
FAN18G4406 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.7e-07 58.9 74 43.2
Manes.16G075500 Manihot esculenta HOM05D002813 ORTHO05D003203 4.7e-07 58.9 51 56.9
Potri.006G238300 Populus trichocarpa HOM05D002813 ORTHO05D003203 4.7e-07 58.9 55 49.1
CiPaw.16G053300 Carya illinoinensis HOM05D002813 ORTHO05D003203 6.2e-07 58.5 59 52.5
FvH4_6g07350 Fragaria vesca HOM05D002813 ORTHO05D003203 8.1e-07 58.2 49 53.1
FAN20G1781 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.1e-07 58.2 52 51.9
FAN21G0510 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.1e-07 58.2 44 61.4
Pp3c9_10120 Physcomitrium patens HOM05D000530 ORTHO05D003341 1.1e-06 57.8 199 27.6
Sopen08g020490 Solanum pennellii HOM05D002813 ORTHO05D003203 1.1e-06 57.8 199 28.1
TAR626G1934 Trochodendron aralioides HOM05D002813 ORTHO05D003203 1.4e-06 57.4 52 48.1
Atru.chr7.2088 Acer truncatum HOM05D002813 ORTHO05D003203 1.8e-06 57.0 55 50.9
MSTRG.20404 Avicennia marina HOM05D002125 ORTHO05D002105 1.8e-06 57.0 161 28.6
FAN27G3291 Fragaria x ananassa HOM05D007761 ORTHO05D003203 1.8e-06 57.0 48 52.1
SEGI_38686 Sequoiadendron giganteum HOM05D002813 ORTHO05D003203 1.8e-06 57.0 52 53.8
FvH4_5g12210 Fragaria vesca HOM05D002813 ORTHO05D003203 2.4e-06 56.6 50 54.0
FAN25G1955 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.4e-06 56.6 43 62.8
RcHm_v2.0_Chr6g0307011 Rosa chinensis HOM05D002813 ORTHO05D003203 2.4e-06 56.6 50 52.0
FvH4_5g12200 Fragaria vesca HOM05D002813 ORTHO05D003203 3.1e-06 56.2 50 52.0
FAN18G0957 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.1e-06 56.2 50 52.0
FvH4_3g11250 Fragaria vesca HOM05D002813 ORTHO05D003203 4.0e-06 55.8 44 59.1
FAN11G0908 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.0e-06 55.8 43 62.8
ATR0705G192 Amborella trichopoda HOM05D002813 ORTHO05D003203 5.2e-06 55.5 50 56.0
FvH4_6g06400 Fragaria vesca HOM05D002813 ORTHO05D003203 5.2e-06 55.5 49 51.0
FAN06G1567 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.2e-06 55.5 49 55.1
FAN14G4978 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.2e-06 55.5 49 51.0
SGA_v2.0_scaffold103G30003 Striga asiatica HOM05D002813 ORTHO05D003203 5.2e-06 55.5 143 30.8
FvH4_7g29850 Fragaria vesca HOM05D002813 ORTHO05D003203 6.8e-06 55.1 49 55.1
FAN04G1781 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.8e-06 55.1 42 57.1
FAN06G0128 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.8e-06 55.1 49 55.1
FAN06G0370 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.8e-06 55.1 49 55.1
FAN06G2359 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.8e-06 55.1 170 30.6
FAN15G1989 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.8e-06 55.1 161 31.1
FAN18G2625 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.8e-06 55.1 40 57.5
FAN18G2715 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.8e-06 55.1 40 57.5
FAN27G2375 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.8e-06 55.1 59 45.8
CDE05G3454 Ceratophyllum demersum HOM05D002125 ORTHO05D002105 8.9e-06 54.7 153 25.5
FvH4_3g40700 Fragaria vesca HOM05D002813 ORTHO05D003203 8.9e-06 54.7 43 60.5
FAN08G0212 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.9e-06 54.7 51 52.9
FAN16G0815 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.9e-06 54.7 43 60.5
FAN25G2464 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.9e-06 54.7 42 61.9
SEGI_20328 Sequoiadendron giganteum HOM05D002813 ORTHO05D003203 8.9e-06 54.7 75 45.3


User provided reference genes

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