Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G3171 Fragaria x ananassa HOM05D002260 ORTHO05D000476 2.9e-61 238.4 124 100.0
FAN10G1247 Fragaria x ananassa HOM05D002260 ORTHO05D000476 1.5e-54 216.1 119 95.0
FvH4_7g11720 Fragaria vesca HOM05D002260 ORTHO05D000476 2.0e-54 215.7 118 95.8
FAN06G3140 Fragaria x ananassa HOM05D002260 ORTHO05D000476 2.0e-54 215.7 118 95.8
FAN10G3219 Fragaria x ananassa HOM05D002260 ORTHO05D000476 2.2e-53 212.2 121 92.6
FAN06G5019 Fragaria x ananassa HOM05D002260 ORTHO05D000476 5.0e-53 211.1 119 95.0
RcHm_v2.0_Chr1g0350241 Rosa chinensis HOM05D002260 ORTHO05D000476 1.2e-46 189.9 119 84.0
FAN01G0762 Fragaria x ananassa HOM05D002260 ORTHO05D000476 3.0e-42 175.3 121 79.3
Prupe.2G144400 Prunus persica HOM05D002260 ORTHO05D000476 1.8e-31 139.4 121 64.5
MD02G1205300 Malus domestica HOM05D002260 ORTHO05D000476 1.7e-29 132.9 121 62.0
Cfa001735 Carpinus fangiana HOM05D002260 ORTHO05D000476 1.1e-23 113.6 129 54.3
CiPaw.01G262600 Carya illinoinensis HOM05D002260 ORTHO05D000476 7.0e-23 110.9 123 54.5
QL08p052614 Quercus lobata HOM05D002260 ORTHO05D000476 1.0e-21 107.1 123 52.8
Cpa.g.c44150 Carica papaya HOM05D002260 ORTHO05D000476 3.8e-21 105.1 122 50.0
Haze_16802 Corylus avellana HOM05D002260 ORTHO05D000476 3.8e-21 105.1 129 51.2
Thecc.01G377500 Theobroma cacao HOM05D002260 ORTHO05D000476 1.2e-19 100.1 122 53.3
COL.COLO4_12538 Corchorus olitorius HOM05D000968 ORTHO05D001687 3.6e-19 98.6 124 50.0
Eucgr.E01440 Eucalyptus grandis HOM05D002260 ORTHO05D000476 6.1e-19 97.8 128 47.7
Duzib133G1500 Durio zibethinus HOM05D002260 ORTHO05D000476 8.0e-19 97.4 122 52.5
Cfa001738 Carpinus fangiana HOM05D002260 ORTHO05D000476 1.8e-18 96.3 132 50.0
MD07G1121800 Malus domestica HOM05D002260 ORTHO05D000476 3.0e-18 95.5 121 48.8
Atru.chr4.1110 Acer truncatum HOM05D002260 ORTHO05D000476 5.2e-18 94.7 114 52.6
CANSAT56G1374 Cannabis sativa HOM05D002260 ORTHO05D000476 6.8e-18 94.4 122 50.8
Atru.chr4.1107 Acer truncatum HOM05D002260 ORTHO05D000476 2.6e-17 92.4 114 52.6
Sabra14G0048800 Salix brachista HOM05D002260 ORTHO05D000476 3.4e-17 92.0 123 47.2
TWI23G0991 Tripterygium wilfordii HOM05D002260 ORTHO05D000476 3.4e-17 92.0 132 45.5
TAR629G3130 Trochodendron aralioides HOM05D002260 ORTHO05D000476 5.7e-17 91.3 129 45.7
Glyma.03G025600 Glycine max HOM05D002260 ORTHO05D000476 2.2e-16 89.4 101 52.5
CSS0016239 Camellia sinensis var. sinensis HOM05D002260 ORTHO05D000476 4.8e-16 88.2 126 43.7
Duzib138G0560 Durio zibethinus HOM05D002260 ORTHO05D000476 8.3e-16 87.4 121 47.1
Oeu055492.1 Olea europaea HOM05D002260 ORTHO05D000476 1.8e-15 86.3 127 44.9
Potri.014G069100 Populus trichocarpa HOM05D002260 ORTHO05D000476 2.4e-15 85.9 123 46.3
MELO3C022499.2 Cucumis melo HOM05D002260 ORTHO05D000476 4.1e-15 85.1 115 47.0
Oeu022407.1 Olea europaea HOM05D002260 ORTHO05D000476 7.0e-15 84.3 112 45.5
Oeu022408.1 Olea europaea HOM05D002260 ORTHO05D000476 7.0e-15 84.3 112 45.5
Dinv32371 Davidia involucrata HOM05D000968 ORTHO05D001687 2.7e-14 82.4 98 48.0
Thhalv10001578m.g Eutrema salsugineum HOM05D002260 ORTHO05D000476 2.7e-14 82.4 101 48.5
Aa31LG1G26880 Aethionema arabicum HOM05D002260 ORTHO05D000476 5.9e-14 81.3 109 45.0
ClCG06G000410 Citrullus lanatus HOM05D002260 ORTHO05D000476 5.9e-14 81.3 115 44.3
vmacro14040 Vaccinium macrocarpon HOM05D002260 ORTHO05D000476 1.0e-13 80.5 136 44.1
ECA236G0237 Erigeron canadensis HOM05D002260 ORTHO05D000476 1.3e-13 80.1 124 41.9
Oeu040235.1 Olea europaea HOM05D002260 ORTHO05D000476 1.3e-13 80.1 124 41.1
Nitab4.5_0000457g0220 Nicotiana tabacum HOM05D002260 ORTHO05D000476 2.9e-13 79.0 127 39.4
vmacro13405 Vaccinium macrocarpon HOM05D002260 ORTHO05D000476 2.9e-13 79.0 109 45.9
Glyma.01G141900 Glycine max HOM05D002260 ORTHO05D000476 3.8e-13 78.6 121 42.1
Phvul.010G083700 Phaseolus vulgaris HOM05D002260 ORTHO05D000476 3.8e-13 78.6 101 50.5
Gohir.A11G080500 Gossypium hirsutum HOM05D002260 ORTHO05D000476 6.5e-13 77.8 104 49.0
VMungo1277G0001 Vigna mungo HOM05D002260 ORTHO05D000476 6.5e-13 77.8 101 48.5
Gorai.007G090800 Gossypium raimondii HOM05D002260 ORTHO05D000476 1.1e-12 77.0 126 44.4
Manes.05G046200 Manihot esculenta HOM05D002260 ORTHO05D000476 1.1e-12 77.0 122 43.4
TWI60G0875 Tripterygium wilfordii HOM05D002260 ORTHO05D000476 1.5e-12 76.6 136 41.2
MSTRG.12058 Avicennia marina HOM05D002260 ORTHO05D000476 3.2e-12 75.5 129 41.1
DCAR_031524 Daucus carota HOM05D002260 ORTHO05D000476 4.2e-12 75.1 107 43.0
Haze_09051 Corylus avellana HOM05D002260 ORTHO05D000476 5.5e-12 74.7 132 39.4
Gohir.D11G085101 Gossypium hirsutum HOM05D002260 ORTHO05D000476 5.5e-12 74.7 120 43.3
Lj2A208G49 Lonicera japonica HOM05D002260 ORTHO05D000476 5.5e-12 74.7 132 41.7
Rhsim07G0028000 Rhododendron simsii HOM05D002260 ORTHO05D000476 5.5e-12 74.7 102 47.1
Sed0006073 Sechium edule HOM05D002260 ORTHO05D000476 7.2e-12 74.3 116 39.7
MSTRG.25548 Avicennia marina HOM05D002260 ORTHO05D000476 9.4e-12 73.9 127 37.8
Potri.002G147150 Populus trichocarpa HOM05D002260 ORTHO05D000476 9.4e-12 73.9 119 42.9
Nitab4.5_0007860g0010 Nicotiana tabacum HOM05D002260 ORTHO05D000476 1.2e-11 73.6 127 37.8
TPR.G7019 Trifolium pratense HOM05D002260 ORTHO05D000476 1.2e-11 73.6 95 51.6
TAR636G2587 Trochodendron aralioides HOM05D002260 ORTHO05D000476 1.6e-11 73.2 148 39.9
AL4G44510 Arabidopsis lyrata HOM05D002260 ORTHO05D000476 2.7e-11 72.4 101 48.5
C04p06340 Brassica napus HOM05D002260 ORTHO05D000476 2.7e-11 72.4 98 46.9
BcaB02g08974 Brassica carinata HOM05D002260 ORTHO05D000476 3.6e-11 72.0 98 46.9
BcaC02g12215 Brassica carinata HOM05D002260 ORTHO05D000476 3.6e-11 72.0 98 46.9
Lj4g0010570 Lotus japonicus HOM05D002260 ORTHO05D000476 6.1e-11 71.2 107 43.0
Dinv39075 Davidia involucrata HOM05D002260 ORTHO05D000476 8.0e-11 70.9 134 38.1
TWI81G0464 Tripterygium wilfordii HOM05D002260 ORTHO05D000476 8.0e-11 70.9 105 43.8
Actinidia05172 Actinidia chinensis HOM05D002260 ORTHO05D000476 1.0e-10 70.5 135 37.8
AT2G45380 Arabidopsis thaliana HOM05D002260 ORTHO05D000476 1.0e-10 70.5 97 49.5
BolC4t22256H Brassica oleracea HOM05D002260 ORTHO05D000476 1.0e-10 70.5 98 45.9
Cfa012018 Carpinus fangiana HOM05D002260 ORTHO05D000476 1.0e-10 70.5 132 37.9
Duzib084G1438 Durio zibethinus HOM05D002260 ORTHO05D000476 1.0e-10 70.5 130 38.5
Lj3g0006036 Lotus japonicus HOM05D002260 ORTHO05D000476 1.0e-10 70.5 95 50.5
Carub.0004s2800 Capsella rubella HOM05D002260 ORTHO05D000476 1.8e-10 69.7 100 47.0
arahy.Tifrunner.gnm1.ann1.CAT1L8 Arachis hypogaea HOM05D002260 ORTHO05D000476 2.3e-10 69.3 117 44.4
Duzib205G0587 Durio zibethinus HOM05D002260 ORTHO05D000476 3.0e-10 68.9 101 42.6
BraA05t19510Z Brassica rapa HOM05D002260 ORTHO05D000476 4.0e-10 68.6 98 45.9
CANSAT21G2004 Cannabis sativa HOM05D002260 ORTHO05D000476 4.0e-10 68.6 121 42.1
Cc08_g13260 Coffea canephora HOM05D002260 ORTHO05D000476 5.2e-10 68.2 126 38.9
Dinv37761 Davidia involucrata HOM05D002260 ORTHO05D000476 5.2e-10 68.2 98 44.9
Gorai.007G021600 Gossypium raimondii HOM05D002260 ORTHO05D000476 6.8e-10 67.8 110 41.8
Gohir.D11G020300 Gossypium hirsutum HOM05D002260 ORTHO05D000476 8.8e-10 67.4 110 40.9
SGA_v2.0_scaffold120G32813 Striga asiatica HOM05D002260 ORTHO05D000476 1.2e-09 67.0 110 39.1
Ca_19919_v3 Cicer arietinum L. HOM05D002260 ORTHO05D000476 1.5e-09 66.6 94 48.9
Eucgr.E00477 Eucalyptus grandis HOM05D002260 ORTHO05D000476 1.5e-09 66.6 139 36.0
BcaB02g08979 Brassica carinata HOM05D002260 ORTHO05D000476 2.0e-09 66.2 98 46.9
Lj7A529T42 Lonicera japonica HOM05D002260 ORTHO05D000476 2.0e-09 66.2 137 40.1
Rhsim07G0101300 Rhododendron simsii HOM05D002260 ORTHO05D000476 2.6e-09 65.9 159 36.5
Nn1g01253 Nelumbo nucifera HOM05D002260 ORTHO05D000476 3.4e-09 65.5 133 39.8
Nitab4.5_0010237g0030 Nicotiana tabacum HOM05D002260 ORTHO05D000476 3.4e-09 65.5 120 38.3
Aqoxy7G00642 Aquilegia oxysepala HOM05D002260 ORTHO05D000476 5.7e-09 64.7 119 40.3
CARHR140580 Cardamine hirsuta HOM05D002260 ORTHO05D000476 5.7e-09 64.7 94 45.7
Manes.01G073400 Manihot esculenta HOM05D002260 ORTHO05D000476 5.7e-09 64.7 100 46.0
Medtr4g024000 Medicago truncatula HOM05D002260 ORTHO05D000476 5.7e-09 64.7 104 47.1
Gohir.A11G020600 Gossypium hirsutum HOM05D002260 ORTHO05D000476 9.8e-09 63.9 102 42.2
Nn4g26379 Nelumbo nucifera HOM05D002260 ORTHO05D000476 9.8e-09 63.9 114 37.7
Psat7g231920 Pisum sativum HOM05D002260 ORTHO05D000476 9.8e-09 63.9 92 48.9
Thecc.03G262100 Theobroma cacao HOM05D002260 ORTHO05D000476 9.8e-09 63.9 102 40.2
CSS0026380 Camellia sinensis var. sinensis HOM05D002260 ORTHO05D000476 1.3e-08 63.5 140 35.0
Glyma.05G053000 Glycine max HOM05D002260 ORTHO05D000476 1.3e-08 63.5 121 36.4
Phvul.003G215200 Phaseolus vulgaris HOM05D002260 ORTHO05D000476 1.3e-08 63.5 163 33.1
PGR042G2490 Punica granatum HOM05D002260 ORTHO05D000476 1.3e-08 63.5 143 37.8
SGA_v2.0_scaffold146G36184 Striga asiatica HOM05D002260 ORTHO05D000476 1.3e-08 63.5 110 37.3
Migut.A00836 Erythranthe guttata HOM05D002260 ORTHO05D000476 1.7e-08 63.2 117 34.2
CSS0048208 Camellia sinensis var. sinensis HOM05D002260 ORTHO05D000476 2.2e-08 62.8 140 35.0
CsaV3_3G003220 Cucumis sativus L. HOM05D002260 ORTHO05D000476 2.2e-08 62.8 128 39.1
Gohir.D03G158200 Gossypium hirsutum HOM05D002260 ORTHO05D000476 2.2e-08 62.8 132 36.4
Gorai.003G166700 Gossypium raimondii HOM05D002260 ORTHO05D000476 2.2e-08 62.8 132 36.4
arahy.Tifrunner.gnm1.ann1.Z5Y4KS Arachis hypogaea HOM05D002260 ORTHO05D000476 2.8e-08 62.4 117 42.7
Gohir.A03G011700 Gossypium hirsutum HOM05D002260 ORTHO05D000476 2.8e-08 62.4 132 36.4
Lsat_1_v5_gn_7_7001 Lactuca sativa HOM05D002260 ORTHO05D000476 2.8e-08 62.4 127 40.2
ClCG00G004650 Citrullus lanatus HOM05D002260 ORTHO05D000476 3.7e-08 62.0 128 37.5
ClCG10G003180 Citrullus lanatus HOM05D002260 ORTHO05D000476 3.7e-08 62.0 128 37.5
Ciclev10020784m.g Citrus clementina HOM05D002260 ORTHO05D000476 3.7e-08 62.0 121 38.0
MELO3C013988.2 Cucumis melo HOM05D002260 ORTHO05D000476 3.7e-08 62.0 128 39.1
HanXRQChr07g0188661 Helianthus annuus HOM05D002260 ORTHO05D000476 3.7e-08 62.0 145 37.9
Lalb_Chr16g0389621 Lupinus albus HOM05D002260 ORTHO05D000476 3.7e-08 62.0 158 36.1
Potri.003G115400 Populus trichocarpa HOM05D002260 ORTHO05D000476 3.7e-08 62.0 120 34.2
SalBow6G6842 Salvia bowleyana HOM05D002260 ORTHO05D000476 3.7e-08 62.0 140 36.4
Duzib068G0431 Durio zibethinus HOM05D002260 ORTHO05D000476 4.9e-08 61.6 132 34.1
Sed0001700 Sechium edule HOM05D002260 ORTHO05D000476 6.3e-08 61.2 134 35.1
ECA233G5854 Erigeron canadensis HOM05D002260 ORTHO05D000476 8.3e-08 60.8 143 34.3
THA.LOC104813900 Tarenaya hassleriana HOM05D002260 ORTHO05D000476 8.3e-08 60.8 125 37.6
Lalb_Chr05g0225381 Lupinus albus HOM05D002260 ORTHO05D000476 1.1e-07 60.5 128 36.7
COL.COLO4_23876 Corchorus olitorius HOM05D002260 ORTHO05D000476 1.4e-07 60.1 104 40.4
Hma1.2p1_0301F.1_g118650 Hydrangea macrophylla HOM05D002260 ORTHO05D000476 1.4e-07 60.1 114 38.6
HPP92_014981 Vanilla planifolia HOM05D002260 ORTHO05D000476 1.4e-07 60.1 113 38.1
SalBow5G4610 Salvia bowleyana HOM05D002260 ORTHO05D000476 1.8e-07 59.7 123 35.0
Sc01g0009210 Simmondsia chinensis HOM05D002260 ORTHO05D000476 1.8e-07 59.7 139 35.3
BcaNung07377 Brassica carinata HOM05D002260 ORTHO05D000476 2.4e-07 59.3 98 42.9
Migut.B01626 Erythranthe guttata HOM05D002260 ORTHO05D000476 4.1e-07 58.5 118 37.3
FAN18G1109 Fragaria x ananassa HOM05D002260 ORTHO05D000476 4.1e-07 58.5 163 33.7
PSO478G2724 Papaver somniferum HOM05D002260 ORTHO05D000476 4.1e-07 58.5 130 36.9
Sopen01g037020 Solanum pennellii HOM05D002260 ORTHO05D000476 4.1e-07 58.5 103 35.0
VMungo1215G3180 Vigna mungo HOM05D002260 ORTHO05D000476 4.1e-07 58.5 164 30.5
Hund28688 Selenicereus undatus HOM05D002260 ORTHO05D000476 5.4e-07 58.2 109 37.6
Hund28690 Selenicereus undatus HOM05D002260 ORTHO05D000476 5.4e-07 58.2 109 37.6
Sc02g0002620 Simmondsia chinensis HOM05D002260 ORTHO05D000476 5.4e-07 58.2 89 44.9
PGSC0003DMG400003933 Solanum tuberosum HOM05D002260 ORTHO05D000476 5.4e-07 58.2 126 31.7
Aqoxy5G01065 Aquilegia oxysepala HOM05D002260 ORTHO05D000476 7.0e-07 57.8 115 36.5
HPP92_014948 Vanilla planifolia HOM05D002260 ORTHO05D000476 7.0e-07 57.8 112 37.5
A05p05400 Brassica napus HOM05D002260 ORTHO05D000476 9.2e-07 57.4 100 41.0
Peaxi162Scf00271g00122 Petunia axillaris HOM05D002260 ORTHO05D000476 9.2e-07 57.4 114 36.0
Sp4g27410 Schrenkiella parvula HOM05D002260 ORTHO05D000476 9.2e-07 57.4 98 39.8
Os08g0117900 Oryza sativa ssp. japonica HOM05D002260 ORTHO05D000476 1.2e-06 57.0 148 33.1
Psat4g068560 Pisum sativum HOM05D002260 ORTHO05D000476 1.2e-06 57.0 178 32.0
Solyc01g091270.3 Solanum lycopersicum HOM05D002260 ORTHO05D000476 2.0e-06 56.2 103 35.0
Ca_12281_v3 Cicer arietinum L. HOM05D002260 ORTHO05D007051 2.7e-06 55.8 161 31.7
arahy.Tifrunner.gnm1.ann1.FH7HBW Arachis hypogaea HOM05D002260 ORTHO05D000476 4.5e-06 55.1 129 37.2
GSVIVG01004908001 Vitis vinifera HOM05D002260 ORTHO05D000476 4.5e-06 55.1 136 37.5
EL10Ac1g00884 Beta vulgaris HOM05D002260 ORTHO05D000476 5.9e-06 54.7 83 45.8
Peaxi162Scf00238g00119 Petunia axillaris HOM05D002260 ORTHO05D000476 5.9e-06 54.7 131 38.2
QL08p053405 Quercus lobata HOM05D002260 ORTHO05D000476 5.9e-06 54.7 156 31.4
DCAR_006799 Daucus carota HOM05D002260 ORTHO05D000476 7.7e-06 54.3 107 43.0
MBI12_g34010_MAGBIO Magnolia biondii HOM05D002260 ORTHO05D000476 7.7e-06 54.3 157 26.1
Nitab4.5_0003534g0080 Nicotiana tabacum HOM05D002260 ORTHO05D000476 7.7e-06 54.3 135 32.6


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