Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G3135 Fragaria x ananassa HOM05D000015 ORTHO05D208855 4.1e-178 627.9 300 100.0
FAN03G0484 Fragaria x ananassa HOM05D000015 ORTHO05D205499 1.5e-50 204.1 94 100.0
Prupe.2G287800 Prunus persica HOM05D000015 ORTHO05D000270 5.2e-24 115.9 312 33.3
CiPaw.07G185500 Carya illinoinensis HOM05D000015 ORTHO05D000270 3.3e-18 96.7 248 31.9
SalBow6G5182 Salvia bowleyana HOM05D000015 ORTHO05D000270 4.3e-18 96.3 297 26.9
SalBow6G6244 Salvia bowleyana HOM05D000015 ORTHO05D000270 7.3e-18 95.5 295 26.8
Ciclev10023551m.g Citrus clementina HOM05D000015 ORTHO05D000270 2.8e-17 93.6 299 27.8
Prupe.5G088500 Prunus persica HOM05D000015 ORTHO05D000270 3.6e-17 93.2 248 31.9
TAR374G0334 Trochodendron aralioides HOM05D000015 ORTHO05D000270 3.6e-17 93.2 302 27.5
FAN13G0984 Fragaria x ananassa HOM05D000015 ORTHO05D000270 4.8e-17 92.8 248 29.4
CSS0002702 Camellia sinensis var. sinensis HOM05D000015 ORTHO05D000270 6.2e-17 92.4 295 27.5
FAN18G0923 Fragaria x ananassa HOM05D000015 ORTHO05D000270 1.8e-16 90.9 256 30.5
FAN18G0975 Fragaria x ananassa HOM05D000015 ORTHO05D000270 1.8e-16 90.9 256 30.5
Atru.chr9.1515 Acer truncatum HOM05D000015 ORTHO05D000270 3.1e-16 90.1 296 27.7
Atru.chr9.1516 Acer truncatum HOM05D000015 ORTHO05D000270 3.1e-16 90.1 296 27.7
FvH4_5g01310 Fragaria vesca HOM05D000015 ORTHO05D000270 3.1e-16 90.1 248 29.4
Manes.01G069100 Manihot esculenta HOM05D000015 ORTHO05D000270 5.3e-16 89.4 298 27.5
Potri.003G120101 Populus trichocarpa HOM05D000015 ORTHO05D000270 1.2e-15 88.2 254 30.7
Dinv39025 Davidia involucrata HOM05D000015 ORTHO05D000270 1.5e-15 87.8 299 26.8
Aqoxy7G00485 Aquilegia oxysepala HOM05D000015 ORTHO05D000270 2.0e-15 87.4 247 28.7
GSVIVG01018442001 Vitis vinifera HOM05D000015 ORTHO05D000270 2.0e-15 87.4 247 29.6
FAN04G1865 Fragaria x ananassa HOM05D000015 ORTHO05D000270 2.6e-15 87.0 256 29.3
Manes.02G030800 Manihot esculenta HOM05D000015 ORTHO05D000270 2.6e-15 87.0 301 27.9
GSVIVG01010670001 Vitis vinifera HOM05D000015 ORTHO05D000270 4.5e-15 86.3 203 33.0
GSVIVG01019877001 Vitis vinifera HOM05D000015 ORTHO05D000270 4.5e-15 86.3 295 27.1
Duzib205G1396 Durio zibethinus HOM05D000015 ORTHO05D000270 1.3e-14 84.7 249 29.7
MBI12_g29938_MAGBIO Magnolia biondii HOM05D000015 ORTHO05D000270 1.3e-14 84.7 296 27.4
Cpa.g.sc4.206 Carica papaya HOM05D000015 ORTHO05D000270 2.9e-14 83.6 295 27.5
Thecc.03G269300 Theobroma cacao HOM05D000015 ORTHO05D000270 2.9e-14 83.6 248 29.4
COL.COLO4_24769 Corchorus olitorius HOM05D000015 ORTHO05D000270 3.8e-14 83.2 248 29.4
MBI12_g29936_MAGBIO Magnolia biondii HOM05D000015 ORTHO05D000270 3.8e-14 83.2 303 27.1
Oeu021158.1 Olea europaea HOM05D000015 ORTHO05D000270 3.8e-14 83.2 300 26.3
Gohir.A08G177700 Gossypium hirsutum HOM05D000015 ORTHO05D000270 4.9e-14 82.8 248 29.0
DCAR_000900 Daucus carota HOM05D000015 ORTHO05D000270 6.4e-14 82.4 248 28.2
Cpa.g.c38276 Carica papaya HOM05D000015 ORTHO05D000270 8.4e-14 82.0 296 27.0
Cpa.g.sc4.208 Carica papaya HOM05D000015 ORTHO05D000270 1.1e-13 81.6 203 30.0
Migut.A00911 Erythranthe guttata HOM05D000015 ORTHO05D000270 1.4e-13 81.3 283 25.8
Manes.01G069200 Manihot esculenta HOM05D000015 ORTHO05D000270 1.4e-13 81.3 301 26.6
CiPaw.16G050700 Carya illinoinensis HOM05D000015 ORTHO05D000270 1.9e-13 80.9 248 27.8
Thecc.03G269400 Theobroma cacao HOM05D000015 ORTHO05D000270 1.9e-13 80.9 248 29.4
Migut.A00909 Erythranthe guttata HOM05D000015 ORTHO05D000270 3.2e-13 80.1 311 26.0
COL.COLO4_23784 Corchorus olitorius HOM05D000015 ORTHO05D000270 4.2e-13 79.7 156 36.5
Gohir.D08G196100 Gossypium hirsutum HOM05D000015 ORTHO05D000270 5.4e-13 79.3 248 28.2
Gorai.004G206800 Gossypium raimondii HOM05D000015 ORTHO05D000270 5.4e-13 79.3 248 28.2
Prupe.5G088600 Prunus persica HOM05D000015 ORTHO05D000270 5.4e-13 79.3 252 29.8
SalBow1G7536 Salvia bowleyana HOM05D000015 ORTHO05D000270 5.4e-13 79.3 256 28.1
SalBow6G0387 Salvia bowleyana HOM05D000015 ORTHO05D000270 5.4e-13 79.3 253 26.5
SalBow6G4077 Salvia bowleyana HOM05D000015 ORTHO05D000270 5.4e-13 79.3 253 26.5
Hma1.2p1_0371F.1_g138220 Hydrangea macrophylla HOM05D000015 ORTHO05D000270 9.3e-13 78.6 248 28.6
MBI12_g42332_MAGBIO Magnolia biondii HOM05D000015 ORTHO05D000270 9.3e-13 78.6 203 31.0
SalBow6G3977 Salvia bowleyana HOM05D000015 ORTHO05D000270 9.3e-13 78.6 301 24.9
Migut.A00912 Erythranthe guttata HOM05D000015 ORTHO05D000270 1.2e-12 78.2 282 25.5
Migut.A00910 Erythranthe guttata HOM05D000015 ORTHO05D000270 1.6e-12 77.8 297 28.3
Potri.012G133200 Populus trichocarpa HOM05D000015 ORTHO05D000270 1.6e-12 77.8 250 27.2
Sabra03G0084200 Salix brachista HOM05D000015 ORTHO05D000270 3.5e-12 76.6 251 27.1
COL.COLO4_23783 Corchorus olitorius HOM05D000015 ORTHO05D000270 6.0e-12 75.9 288 27.4
GSVIVG01018437001 Vitis vinifera HOM05D000015 ORTHO05D000270 7.9e-12 75.5 151 35.8
GSVIVG01010668001 Vitis vinifera HOM05D000015 ORTHO05D000270 1.3e-11 74.7 151 35.1
Dinv35142 Davidia involucrata HOM05D000015 ORTHO05D000270 1.8e-11 74.3 157 33.8
Atru.chr1.553 Acer truncatum HOM05D000015 ORTHO05D000270 3.9e-11 73.2 238 30.7
ATR0210G027 Amborella trichopoda HOM05D000015 ORTHO05D000270 3.9e-11 73.2 245 28.6
QL12p016746 Quercus lobata HOM05D000015 ORTHO05D000270 5.1e-11 72.8 149 34.2
ATR0757G166 Amborella trichopoda HOM05D000015 ORTHO05D000270 6.7e-11 72.4 295 26.8
Haze_08968 Corylus avellana HOM05D000015 ORTHO05D000270 8.7e-11 72.0 199 34.7
MBI14_g02872_MAGBIO Magnolia biondii HOM05D000015 ORTHO05D000270 1.1e-10 71.6 251 25.5
MELO3C023918.2 Cucumis melo HOM05D000015 ORTHO05D000270 1.5e-10 71.2 169 27.8
Ciclev10033662m.g Citrus clementina HOM05D000015 ORTHO05D000270 1.9e-10 70.9 304 25.0
FAN08G2384 Fragaria x ananassa HOM05D000015 ORTHO05D000270 1.9e-10 70.9 228 28.5
Potri.010G196700 Populus trichocarpa HOM05D000015 ORTHO05D000270 1.9e-10 70.9 202 27.7
DCAR_018143 Daucus carota HOM05D000015 ORTHO05D000270 2.5e-10 70.5 258 26.0
FAN01G0240 Fragaria x ananassa HOM05D000015 ORTHO05D204318 2.5e-10 70.5 36 83.3
Sed0000169 Sechium edule HOM05D000015 ORTHO05D000270 2.5e-10 70.5 168 27.4
CsaV3_5G008520 Cucumis sativus L. HOM05D000015 ORTHO05D000270 3.3e-10 70.1 169 27.2
Dinv34709 Davidia involucrata HOM05D000015 ORTHO05D000270 4.3e-10 69.7 199 30.2
PGR044G1908 Punica granatum HOM05D000015 ORTHO05D000270 4.3e-10 69.7 295 25.1
Sabra10G0151300 Salix brachista HOM05D000015 ORTHO05D000270 4.3e-10 69.7 247 24.7
SalBow6G1054 Salvia bowleyana HOM05D000001 ORTHO05D009545 4.3e-10 69.7 118 35.6
ClCG07G003730 Citrullus lanatus HOM05D000015 ORTHO05D000270 5.6e-10 69.3 162 29.6
Lalb_Chr19g0139981 Lupinus albus HOM05D000015 ORTHO05D000270 7.4e-10 68.9 117 33.3
MELO3C023899.2 Cucumis melo HOM05D000015 ORTHO05D000270 1.3e-09 68.2 152 30.9
MBI12_g36690_MAGBIO Magnolia biondii HOM05D000015 ORTHO05D000270 1.3e-09 68.2 296 25.3
Potri.010G196800 Populus trichocarpa HOM05D000015 ORTHO05D000270 1.3e-09 68.2 202 27.7
MD06G1070500 Malus domestica HOM05D000015 ORTHO05D029997 1.6e-09 67.8 166 33.1
Thecc.09G332200 Theobroma cacao HOM05D000015 ORTHO05D000270 4.8e-09 66.2 298 24.8
Cc08_g13840 Coffea canephora HOM05D000015 ORTHO05D000270 6.2e-09 65.9 246 24.4
ATR0210G024 Amborella trichopoda HOM05D000015 ORTHO05D000270 8.1e-09 65.5 249 27.7
CsaV3_5G008470 Cucumis sativus L. HOM05D000015 ORTHO05D000270 1.1e-08 65.1 152 30.3
Cfa001405 Carpinus fangiana HOM05D000015 ORTHO05D000270 1.4e-08 64.7 299 24.7
Duzib106G0056 Durio zibethinus HOM05D000015 ORTHO05D000270 1.4e-08 64.7 155 31.6
AUR62017197 Chenopodium quinoa HOM05D000015 ORTHO05D000270 1.8e-08 64.3 159 31.4
Manes.10G021800 Manihot esculenta HOM05D000015 ORTHO05D000270 1.8e-08 64.3 295 25.1
Duzib106G0467 Durio zibethinus HOM05D000015 ORTHO05D000270 2.4e-08 63.9 155 31.6
Duzib106G1264 Durio zibethinus HOM05D000015 ORTHO05D000270 2.4e-08 63.9 155 31.6
Duzib106G1299 Durio zibethinus HOM05D000015 ORTHO05D000270 2.4e-08 63.9 155 31.6
FAN25G3800 Fragaria x ananassa HOM05D000015 ORTHO05D000270 2.4e-08 63.9 203 30.5
Cpa.g.sc29.24 Carica papaya HOM05D000015 ORTHO05D009789 3.1e-08 63.5 116 36.2
SEGI_21688 Sequoiadendron giganteum HOM05D000015 ORTHO05D000270 3.1e-08 63.5 328 23.8
arahy.Tifrunner.gnm1.ann1.495VLN Arachis hypogaea HOM05D000015 ORTHO05D000270 4.0e-08 63.2 199 29.6
HanXRQChr14g0458421 Helianthus annuus HOM05D000015 ORTHO05D000270 4.0e-08 63.2 295 24.1
Manes.10G021450 Manihot esculenta HOM05D000015 ORTHO05D000270 4.0e-08 63.2 155 29.7
Haze_22190 Corylus avellana HOM05D000015 ORTHO05D000270 5.3e-08 62.8 135 32.6
Lj1C944T3 Lonicera japonica HOM05D000015 ORTHO05D000270 5.3e-08 62.8 168 29.2
SGA_v2.0_scaffold286G47117 Striga asiatica HOM05D000015 ORTHO05D000270 9.0e-08 62.0 252 26.2
TWI38G1306 Tripterygium wilfordii HOM05D000015 ORTHO05D000270 9.0e-08 62.0 202 26.2
GSVIVG01016448001 Vitis vinifera HOM05D000015 ORTHO05D000270 9.0e-08 62.0 202 25.2
DCAR_018142 Daucus carota HOM05D000015 ORTHO05D000270 1.2e-07 61.6 270 24.4
Lj8C31T16 Lonicera japonica HOM05D000015 ORTHO05D000270 1.2e-07 61.6 118 32.2
Potri.010G196900 Populus trichocarpa HOM05D000015 ORTHO05D000270 1.2e-07 61.6 247 23.5
GSVIVG01018438001 Vitis vinifera HOM05D000015 ORTHO05D000270 1.2e-07 61.6 214 25.7
ClCG07G003720 Citrullus lanatus HOM05D000015 ORTHO05D000270 1.5e-07 61.2 249 24.5
Thecc.10G032300 Theobroma cacao HOM05D000015 ORTHO05D000270 1.5e-07 61.2 155 29.7
arahy.Tifrunner.gnm1.ann1.AHQ588 Arachis hypogaea HOM05D000015 ORTHO05D000270 2.0e-07 60.8 199 29.1
GSVIVG01016447001 Vitis vinifera HOM05D000015 ORTHO05D000270 2.0e-07 60.8 244 22.5
Duzib114G0476 Durio zibethinus HOM05D000015 ORTHO05D000270 2.6e-07 60.5 299 23.4
Hma1.2p1_0569F.1_g180330 Hydrangea macrophylla HOM05D000015 ORTHO05D000270 2.6e-07 60.5 151 31.8
GSVIVG01016443001 Vitis vinifera HOM05D000015 ORTHO05D000270 2.6e-07 60.5 151 28.5
Cpa.g.sc81.82 Carica papaya HOM05D000015 ORTHO05D000270 3.4e-07 60.1 244 26.6
FvH4_3g37170 Fragaria vesca HOM05D000015 ORTHO05D000270 3.4e-07 60.1 153 32.7
FAN11G1289 Fragaria x ananassa HOM05D000015 ORTHO05D000270 3.4e-07 60.1 153 32.7
Sed0007410 Sechium edule HOM05D000015 ORTHO05D000270 4.5e-07 59.7 159 28.3
Dinv34713 Davidia involucrata HOM05D000015 ORTHO05D000270 5.8e-07 59.3 221 27.1
Thecc.09G332500 Theobroma cacao HOM05D000015 ORTHO05D000270 5.8e-07 59.3 205 27.8
Gorai.011G272500 Gossypium raimondii HOM05D000015 ORTHO05D000270 7.6e-07 58.9 209 26.8
Thecc.10G031500 Theobroma cacao HOM05D000015 ORTHO05D000270 7.6e-07 58.9 305 23.6
Phvul.008G229500 Phaseolus vulgaris HOM05D000015 ORTHO05D000270 9.9e-07 58.5 169 28.4
GSVIVG01016446001 Vitis vinifera HOM05D000015 ORTHO05D000270 9.9e-07 58.5 155 27.7
Gohir.D10G238200 Gossypium hirsutum HOM05D000015 ORTHO05D000270 1.3e-06 58.2 199 28.6
DCAR_009409 Daucus carota HOM05D000015 ORTHO05D000270 1.7e-06 57.8 167 30.5
Gohir.A08G000084 Gossypium hirsutum HOM05D000015 ORTHO05D000270 1.7e-06 57.8 230 27.8
GSVIVG01016445001 Vitis vinifera HOM05D000015 ORTHO05D000270 1.7e-06 57.8 151 28.5
Cc02_g07240 Coffea canephora HOM05D000015 ORTHO05D000270 2.2e-06 57.4 152 30.3
HanXRQChr07g0201581 Helianthus annuus HOM05D000015 ORTHO05D000270 3.8e-06 56.6 249 23.3
Hma1.2p1_0039F.1_g024850 Hydrangea macrophylla HOM05D000015 ORTHO05D000270 3.8e-06 56.6 161 29.8
Lj2A313G79 Lonicera japonica HOM05D000015 ORTHO05D004138 3.8e-06 56.6 258 25.2
Potri.009G037900 Populus trichocarpa HOM05D000015 ORTHO05D000270 3.8e-06 56.6 244 25.4
Gohir.D08G008701 Gossypium hirsutum HOM05D000015 ORTHO05D000270 6.4e-06 55.8 217 27.6
Gorai.004G001900 Gossypium raimondii HOM05D000015 ORTHO05D000270 6.4e-06 55.8 217 27.2


User provided reference genes

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