Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G3044 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.2e-186 656.4 323 100.0
FvH4_7g09990 Fragaria vesca HOM05D002637 ORTHO05D008095 4.3e-181 637.9 323 96.6
FAN06G4488 Fragaria x ananassa HOM05D002637 ORTHO05D008095 3.5e-175 618.2 331 93.7
FAN06G0182 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.3e-174 616.3 331 93.4
FAN10G1960 Fragaria x ananassa HOM05D002637 ORTHO05D008095 5.8e-170 600.9 331 90.9
RcHm_v2.0_Chr1g0347591 Rosa chinensis HOM05D002637 ORTHO05D008095 5.6e-157 557.8 323 86.4
Prupe.2G132600 Prunus persica HOM05D002637 ORTHO05D008095 3.0e-134 482.3 324 74.4
QL04p030554 Quercus lobata HOM05D002637 ORTHO05D008095 2.9e-121 439.1 342 67.0
GSVIVG01018268001 Vitis vinifera HOM05D002637 ORTHO05D008095 2.9e-121 439.1 324 68.5
MD07G1104800 Malus domestica HOM05D002637 ORTHO05D008095 3.0e-118 429.1 297 73.4
CSS0015236 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 1.7e-116 423.3 325 64.3
CSS0036120 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 4.8e-116 421.8 325 63.7
Hma1.2p1_0405F.1_g145580 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 6.3e-116 421.4 326 64.1
Hma1.2p1_3157F.1_g333383 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 6.3e-116 421.4 326 64.1
Atru.chr5.146 Acer truncatum HOM05D002637 ORTHO05D008095 1.1e-115 420.6 330 65.5
Haze_02837 Corylus avellana HOM05D002637 ORTHO05D008095 5.3e-115 418.3 330 65.5
Manes.01G272700 Manihot esculenta HOM05D002637 ORTHO05D008095 6.9e-115 417.9 324 66.0
Duzib133G1175 Durio zibethinus HOM05D002637 ORTHO05D008095 5.0e-113 411.8 329 65.0
Dinv43626 Davidia involucrata HOM05D002637 ORTHO05D008095 6.5e-113 411.4 330 63.6
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 1.9e-112 409.8 327 64.5
Glyma.13G187300 Glycine max HOM05D002637 ORTHO05D008095 2.7e-111 406.0 328 62.5
Thecc.01G393500 Theobroma cacao HOM05D002637 ORTHO05D008095 7.9e-111 404.4 329 63.5
CANSAT64G0516 Cannabis sativa HOM05D002637 ORTHO05D008095 3.0e-110 402.5 326 64.4
Cpa.g.sc166.42 Carica papaya HOM05D002637 ORTHO05D008095 4.4e-109 398.7 330 62.7
Gohir.A08G058900 Gossypium hirsutum HOM05D002637 ORTHO05D008095 5.7e-109 398.3 324 60.8
Lj7A545T102 Lonicera japonica HOM05D002637 ORTHO05D008095 5.7e-109 398.3 324 60.2
TWI59G1212 Tripterygium wilfordii HOM05D002637 ORTHO05D008095 9.7e-109 397.5 330 63.9
Ciclev10021077m.g Citrus clementina HOM05D002637 ORTHO05D008095 1.7e-108 396.7 333 61.0
Lalb_Chr03g0040331 Lupinus albus HOM05D002637 ORTHO05D008095 1.7e-108 396.7 330 60.3
Gorai.004G071300 Gossypium raimondii HOM05D002637 ORTHO05D008095 2.2e-108 396.4 324 60.8
Gohir.D08G068100 Gossypium hirsutum HOM05D002637 ORTHO05D008095 6.3e-108 394.8 324 60.5
Lj1g0002851 Lotus japonicus HOM05D002637 ORTHO05D008095 1.4e-107 393.7 332 63.3
Sed0022781 Sechium edule HOM05D002637 ORTHO05D008095 1.8e-107 393.3 327 61.5
CsaV3_3G007610 Cucumis sativus L. HOM05D002637 ORTHO05D008095 7.0e-107 391.3 327 61.5
ECA240G0640 Erigeron canadensis HOM05D002637 ORTHO05D008095 1.6e-106 390.2 324 59.9
PGR004G1933 Punica granatum HOM05D002637 ORTHO05D008095 2.0e-106 389.8 331 59.5
Phvul.011G190700 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 3.5e-106 389.0 324 62.0
Sc26g0001610 Simmondsia chinensis HOM05D002637 ORTHO05D008095 4.5e-106 388.7 323 59.1
Potri.002G137300 Populus trichocarpa HOM05D002637 ORTHO05D008095 1.0e-105 387.5 324 64.8
HanXRQChr13g0423181 Helianthus annuus HOM05D002637 ORTHO05D008095 1.1e-104 384.0 324 59.6
ClCG05G000440 Citrullus lanatus HOM05D002637 ORTHO05D008095 1.9e-104 383.3 327 59.6
MELO3C005982.2 Cucumis melo HOM05D002637 ORTHO05D008095 1.9e-104 383.3 331 60.4
Lsat_1_v5_gn_3_131600 Lactuca sativa HOM05D002637 ORTHO05D008095 1.2e-103 380.6 327 59.3
VMungo1127G0026 Vigna mungo HOM05D002637 ORTHO05D008095 1.6e-103 380.2 321 60.4
Aqoxy3G02741 Aquilegia oxysepala HOM05D002637 ORTHO05D008095 2.1e-103 379.8 332 59.3
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 2.1e-103 379.8 324 59.0
arahy.Tifrunner.gnm1.ann1.XZZ81X Arachis hypogaea HOM05D002637 ORTHO05D008095 2.1e-103 379.8 324 59.6
Nn1g00861 Nelumbo nucifera HOM05D002637 ORTHO05D008095 2.1e-103 379.8 328 59.8
Sopen01g036170 Solanum pennellii HOM05D002637 ORTHO05D008095 6.1e-103 378.3 329 60.2
Psat0s4320g0040 Pisum sativum HOM05D002637 ORTHO05D008095 1.0e-102 377.5 323 60.4
Solyc01g090380.3 Solanum lycopersicum HOM05D002637 ORTHO05D008095 1.0e-102 377.5 329 59.9
Carub.0004s2744 Capsella rubella HOM05D002637 ORTHO05D008095 1.4e-102 377.1 326 58.0
Rhsim07G0035200 Rhododendron simsii HOM05D002637 ORTHO05D008095 1.8e-102 376.7 321 60.4
THA.LOC104827587 Tarenaya hassleriana HOM05D002637 ORTHO05D008095 3.0e-102 375.9 327 58.7
Medtr7g407140 Medicago truncatula HOM05D002637 ORTHO05D008095 5.2e-102 375.2 320 60.6
Nitab4.5_0003696g0060 Nicotiana tabacum HOM05D002637 ORTHO05D008095 6.7e-102 374.8 330 57.6
Cc02_g25040 Coffea canephora HOM05D002637 ORTHO05D008095 1.5e-101 373.6 329 59.6
Peaxi162Scf00030g00416 Petunia axillaris HOM05D002637 ORTHO05D008095 3.3e-101 372.5 330 57.9
Nitab4.5_0003553g0010 Nicotiana tabacum HOM05D002637 ORTHO05D008095 4.4e-101 372.1 330 57.0
PGSC0003DMG402026045 Solanum tuberosum HOM05D002637 ORTHO05D008095 5.7e-101 371.7 329 59.3
Eucgr.D01520 Eucalyptus grandis HOM05D002637 ORTHO05D008095 9.7e-101 370.9 328 57.0
AUR62008551 Chenopodium quinoa HOM05D002637 ORTHO05D008095 1.7e-100 370.2 324 56.8
AUR62021542 Chenopodium quinoa HOM05D002637 ORTHO05D008095 2.2e-100 369.8 326 57.1
Prupe.2G128900 Prunus persica HOM05D002637 ORTHO05D008095 1.8e-99 366.7 327 60.9
Aa31LG1G26400 Aethionema arabicum HOM05D002637 ORTHO05D008095 4.1e-99 365.5 345 54.8
MSTRG.20697 Avicennia marina HOM05D002637 ORTHO05D008095 9.1e-99 364.4 329 57.4
Oeu063231.1 Olea europaea HOM05D002637 ORTHO05D008095 9.1e-99 364.4 331 57.7
EL10Ac1g00753 Beta vulgaris HOM05D002637 ORTHO05D008095 3.5e-98 362.5 321 57.0
Migut.B01542 Erythranthe guttata HOM05D002637 ORTHO05D008095 4.5e-98 362.1 326 60.4
PSO063G7293 Papaver somniferum HOM05D002637 ORTHO05D008095 7.7e-98 361.3 330 56.4
Actinidia12150 Actinidia chinensis HOM05D002637 ORTHO05D008095 1.7e-97 360.1 301 60.8
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 5.0e-97 358.6 323 57.9
Sp4g26950 Schrenkiella parvula HOM05D002637 ORTHO05D008095 8.5e-97 357.8 334 54.8
CAN.G362.5 Capsicum annuum HOM05D002637 ORTHO05D008095 1.5e-96 357.1 329 55.9
COL.COLO4_12421 Corchorus olitorius HOM05D002637 ORTHO05D008095 1.5e-96 357.1 295 64.7
Thhalv10001543m.g Eutrema salsugineum HOM05D002637 ORTHO05D008095 1.6e-95 353.6 333 54.4
AL4G43950 Arabidopsis lyrata HOM05D002637 ORTHO05D008095 8.0e-95 351.3 330 55.5
CARHR140110 Cardamine hirsuta HOM05D002637 ORTHO05D008095 1.0e-94 350.9 329 55.0
vmacro13491 Vaccinium macrocarpon HOM05D002637 ORTHO05D008095 5.2e-94 348.6 292 61.6
A04p33520 Brassica napus HOM05D002637 ORTHO05D008095 9.8e-93 344.4 323 54.8
BcaC02g07119 Brassica carinata HOM05D002637 ORTHO05D008095 3.7e-92 342.4 323 53.9
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 8.3e-92 341.3 285 60.4
BcaB06g29403 Brassica carinata HOM05D002637 ORTHO05D008095 2.4e-91 339.7 325 55.1
CDE09G0379 Ceratophyllum demersum HOM05D002637 ORTHO05D008095 1.2e-90 337.4 328 53.7
C04p71280 Brassica napus HOM05D002637 ORTHO05D008095 2.0e-90 336.7 325 53.8
BolC4t28632H Brassica oleracea HOM05D002637 ORTHO05D008095 2.0e-90 336.7 325 53.8
BraA04t18814Z Brassica rapa HOM05D002637 ORTHO05D008095 2.3e-89 333.2 324 53.4
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 1.9e-88 330.1 268 63.8
Sabra02G0106200 Salix brachista HOM05D001766 ORTHO05D001875 3.2e-88 329.3 370 52.2
AT2G44850 Arabidopsis thaliana HOM05D002637 ORTHO05D008095 5.5e-88 328.6 310 55.2
SHI13611 Sapria himalayana HOM05D002637 ORTHO05D008095 4.7e-87 325.5 331 50.8
Hund17095 Selenicereus undatus HOM05D002637 ORTHO05D008095 7.8e-82 308.1 262 58.4
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 8.6e-81 304.7 309 53.1
HPP92_014683 Vanilla planifolia HOM05D002637 ORTHO05D008095 4.4e-77 292.4 327 49.2
DCAR_015837 Daucus carota HOM05D002637 ORTHO05D008095 7.5e-77 291.6 333 50.2
PSO782G4032 Papaver somniferum HOM05D002637 ORTHO05D008095 7.5e-77 291.6 326 49.4
ATR0057G061 Amborella trichopoda HOM05D002637 ORTHO05D008095 1.1e-72 277.7 347 46.1
Os02g0655100 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D008095 7.3e-72 275.0 330 44.2
Zm00001eb186370 Zea mays HOM05D002637 ORTHO05D008095 1.8e-70 270.4 339 43.1
Eucgr.D01526 Eucalyptus grandis HOM05D002637 ORTHO05D008095 5.8e-69 265.4 254 53.9
AagrBONN_evm.TU.Sc2ySwM_117.1982 Anthoceros agrestis HOM05D002637 ORTHO05D008095 1.7e-68 263.8 330 42.4
Pp3c12_10320 Physcomitrium patens HOM05D002637 ORTHO05D008095 8.1e-63 245.0 366 38.5
TAR629G1915 Trochodendron aralioides HOM05D002637 ORTHO05D008095 2.6e-61 240.0 211 59.7
Pp3c4_13850 Physcomitrium patens HOM05D002637 ORTHO05D008095 1.1e-59 234.6 383 37.1
SalBow5G4529 Salvia bowleyana HOM05D002637 ORTHO05D008095 1.2e-55 221.1 181 62.4
Ah.05g177920 Amaranthus hybridus HOM05D002637 ORTHO05D008095 1.1e-43 181.4 133 65.4
Hma1.2p1_2406F.1_g321490 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 5.4e-43 179.1 153 58.8
TPR.G28606 Trifolium pratense HOM05D002637 ORTHO05D008095 1.6e-42 177.6 139 63.3
MBI04_g07220_MAGBIO Magnolia biondii HOM05D002637 ORTHO05D008095 2.0e-37 160.6 126 62.7
SEGI_14087 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 4.2e-35 152.9 199 46.2
SEGI_39924 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 1.6e-34 151.0 138 54.3
Medtr7g407110 Medicago truncatula HOM05D002637 ORTHO05D008095 2.7e-34 150.2 118 61.0
CBR_g61261 Chara braunii HOM05D002637 ORTHO05D008095 3.0e-33 146.7 321 31.2
TPR.G7688 Trifolium pratense HOM05D002637 ORTHO05D008095 5.3e-30 136.0 133 55.6
TPR.G36686 Trifolium pratense HOM05D002637 ORTHO05D008095 7.6e-29 132.1 99 67.7
Medtr7g006510 Medicago truncatula HOM05D002637 ORTHO05D008095 1.9e-24 117.5 101 53.5
Atru.chr5.3330 Acer truncatum HOM05D002637 ORTHO05D008095 3.1e-22 110.2 154 44.2
TPR.G32964 Trifolium pratense HOM05D002637 ORTHO05D008095 9.0e-22 108.6 87 60.9
FAN06G2370 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.2e-21 108.2 61 82.0
Phvul.011G167200 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 6.5e-20 102.4 117 50.4
Atru.chr5.3333 Acer truncatum HOM05D000263 ORTHO05D000213 1.9e-16 90.9 113 49.6
Cre03.g181600 Chlamydomonas reinhardtii HOM05D002637 ORTHO05D008095 9.7e-16 88.6 314 23.9
Aa31LG7G11720 Aethionema arabicum HOM05D002637 ORTHO05D008095 1.3e-12 78.2 67 55.2
Atru.chr5.3338 Acer truncatum HOM05D002637 ORTHO05D008095 2.7e-10 70.5 56 62.5
TAR629G2985 Trochodendron aralioides HOM05D002637 ORTHO05D008095 4.6e-10 69.7 50 62.0


User provided reference genes

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