Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G0488 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.3e-88 329.7 171 100.0
FAN03G2818 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.3e-88 329.7 171 100.0
FAN06G4318 Fragaria x ananassa HOM05D007220 ORTHO05D009058 9.8e-84 313.5 171 96.5
FvH4_7g27960 Fragaria vesca HOM05D007220 ORTHO05D009058 2.2e-83 312.4 171 96.5
FAN06G0674 Fragaria x ananassa HOM05D007220 ORTHO05D009058 2.5e-79 298.9 171 91.8
FAN10G3220 Fragaria x ananassa HOM05D007220 ORTHO05D009058 4.7e-78 294.7 171 91.2
FAN01G2832 Fragaria x ananassa HOM05D007220 ORTHO05D009058 6.8e-77 290.8 171 89.5
RcHm_v2.0_Chr1g0374911 Rosa chinensis HOM05D007220 ORTHO05D009058 1.1e-71 273.5 174 87.9
MD01G1184500 Malus domestica HOM05D007220 ORTHO05D009058 1.2e-52 210.3 177 65.5
Manes.14G034000 Manihot esculenta HOM05D007220 ORTHO05D009058 1.0e-48 197.2 185 61.6
Thecc.03G158900 Theobroma cacao HOM05D007220 ORTHO05D009058 4.7e-46 188.3 166 63.9
Duzib205G1715 Durio zibethinus HOM05D007220 ORTHO05D009058 1.7e-43 179.9 167 61.1
Cfa008220 Carpinus fangiana HOM05D007220 ORTHO05D009058 2.2e-43 179.5 182 58.8
Dinv28549 Davidia involucrata HOM05D007220 ORTHO05D009058 1.1e-42 177.2 157 61.8
GSVIVG01018558001 Vitis vinifera HOM05D007220 ORTHO05D009058 1.1e-42 177.2 153 58.8
BcaC01g06128 Brassica carinata HOM05D007220 ORTHO05D009058 1.4e-42 176.8 175 59.4
C03p18980 Brassica napus HOM05D007220 ORTHO05D009058 1.4e-42 176.8 175 59.4
BolC3t14287H Brassica oleracea HOM05D007220 ORTHO05D009058 1.4e-42 176.8 175 59.4
CsaV3_3G016270 Cucumis sativus L. HOM05D007220 ORTHO05D009058 2.4e-42 176.0 175 55.4
Haze_13838 Corylus avellana HOM05D007220 ORTHO05D009058 4.2e-42 175.3 182 57.7
MELO3C006826.2 Cucumis melo HOM05D007220 ORTHO05D009058 4.2e-42 175.3 181 55.2
TWI39G1186 Tripterygium wilfordii HOM05D007220 ORTHO05D009058 5.4e-42 174.9 175 56.6
BraA03t10902Z Brassica rapa HOM05D007220 ORTHO05D009058 7.1e-42 174.5 171 58.5
THA.LOC104811513 Tarenaya hassleriana HOM05D007220 ORTHO05D009058 1.2e-41 173.7 180 55.6
Cpa.g.sc3.292 Carica papaya HOM05D007220 ORTHO05D009058 6.0e-41 171.4 191 54.5
COL.COLO4_14153 Corchorus olitorius HOM05D007220 ORTHO05D009058 6.0e-41 171.4 164 59.1
BcaB01g04168 Brassica carinata HOM05D007220 ORTHO05D009058 1.7e-40 169.9 175 57.1
ClCG05G007450 Citrullus lanatus HOM05D007220 ORTHO05D009058 1.7e-40 169.9 181 53.6
Gohir.D07G043100 Gossypium hirsutum HOM05D007220 ORTHO05D009058 2.3e-40 169.5 104 76.9
Sabra15G0142900 Salix brachista HOM05D007220 ORTHO05D009058 2.3e-40 169.5 175 55.4
Gohir.A07G038900 Gossypium hirsutum HOM05D007220 ORTHO05D009058 3.9e-40 168.7 104 76.0
Gorai.001G046100 Gossypium raimondii HOM05D007220 ORTHO05D009058 3.9e-40 168.7 104 76.0
Actinidia25024 Actinidia chinensis HOM05D007220 ORTHO05D009058 5.1e-40 168.3 174 57.5
Dinv22967 Davidia involucrata HOM05D007220 ORTHO05D009058 2.5e-39 166.0 141 62.4
Potri.015G129600 Populus trichocarpa HOM05D007220 ORTHO05D009058 4.3e-39 165.2 175 56.0
PGR042G1708 Punica granatum HOM05D007220 ORTHO05D009058 5.6e-39 164.9 104 73.1
Eucgr.A02878 Eucalyptus grandis HOM05D007220 ORTHO05D009058 9.6e-39 164.1 184 53.3
Sc19g0001910 Simmondsia chinensis HOM05D007220 ORTHO05D009058 3.6e-38 162.2 182 53.3
Glyma.09G232600 Glycine max HOM05D007220 ORTHO05D009058 6.2e-38 161.4 166 54.2
Medtr4g035825 Medicago truncatula HOM05D007220 ORTHO05D009058 1.1e-37 160.6 162 54.9
Sp6g13740 Schrenkiella parvula HOM05D007220 ORTHO05D009058 1.1e-37 160.6 171 53.2
AT5G51545 Arabidopsis thaliana HOM05D007220 ORTHO05D009058 1.8e-37 159.8 168 54.8
unitig_46.g18768 Utricularia gibba HOM05D007220 ORTHO05D009058 1.8e-37 159.8 161 54.7
Cc02_g04040 Coffea canephora HOM05D007220 ORTHO05D009058 2.4e-37 159.5 134 59.7
CiPaw.04G061800 Carya illinoinensis HOM05D007220 ORTHO05D009058 3.1e-37 159.1 189 50.8
AL8G25850 Arabidopsis lyrata HOM05D007220 ORTHO05D009058 6.9e-37 157.9 175 52.6
QL09p019051 Quercus lobata HOM05D007220 ORTHO05D009058 9.0e-37 157.5 189 51.3
arahy.Tifrunner.gnm1.ann1.0IXC5E Arachis hypogaea HOM05D007220 ORTHO05D009058 1.5e-36 156.8 104 71.2
Carub.0008s1158 Capsella rubella HOM05D007220 ORTHO05D009058 2.0e-36 156.4 171 54.4
Psat7g150000 Pisum sativum HOM05D007220 ORTHO05D009058 5.8e-36 154.8 168 51.8
Ciclev10005924m.g Citrus clementina HOM05D007220 ORTHO05D009058 9.9e-36 154.1 123 64.2
A03p16110 Brassica napus HOM05D007220 ORTHO05D009058 2.2e-35 152.9 173 53.2
Ca_30916_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 3.8e-35 152.1 154 53.2
Atru.chr1.664 Acer truncatum HOM05D007220 ORTHO05D009058 6.4e-35 151.4 104 67.3
Nn4g26358 Nelumbo nucifera HOM05D007220 ORTHO05D009058 8.4e-35 151.0 172 49.4
VMungo1127G0384 Vigna mungo HOM05D007220 ORTHO05D009058 8.4e-35 151.0 158 53.2
vmacro09892 Vaccinium macrocarpon HOM05D007220 ORTHO05D009058 1.1e-34 150.6 182 51.6
Rhsim09G0192800 Rhododendron simsii HOM05D007220 ORTHO05D009058 1.4e-34 150.2 156 53.2
SGA_v2.0_scaffold486G52391 Striga asiatica HOM05D007220 ORTHO05D009058 1.4e-34 150.2 174 54.6
Lj3g0016008 Lotus japonicus HOM05D007220 ORTHO05D009058 1.9e-34 149.8 152 52.0
MSTRG.27183 Avicennia marina HOM05D007220 ORTHO05D009058 3.2e-34 149.1 192 47.4
EL10Ac3g05813 Beta vulgaris HOM05D007220 ORTHO05D009058 3.2e-34 149.1 144 57.6
Solyc03g083570.3 Solanum lycopersicum HOM05D007220 ORTHO05D009058 4.2e-34 148.7 134 59.7
HanXRQChr08g0223851 Helianthus annuus HOM05D007220 ORTHO05D009058 9.3e-34 147.5 166 49.4
Nitab4.5_0001548g0050 Nicotiana tabacum HOM05D007220 ORTHO05D009058 9.3e-34 147.5 129 59.7
CSS0026352 Camellia sinensis var. sinensis HOM05D007220 ORTHO05D009058 2.1e-33 146.4 107 67.3
Lsat_1_v5_gn_8_9340 Lactuca sativa HOM05D007220 ORTHO05D009058 4.6e-33 145.2 163 53.4
Migut.F00451 Erythranthe guttata HOM05D007220 ORTHO05D009058 6.0e-33 144.8 96 71.9
Phvul.011G004500 Phaseolus vulgaris HOM05D007220 ORTHO05D009058 6.0e-33 144.8 156 51.9
SGA_v2.0_scaffold2G01175 Striga asiatica HOM05D007220 ORTHO05D009058 7.8e-33 144.4 175 50.9
CARHR264320 Cardamine hirsuta HOM05D007220 ORTHO05D009058 1.0e-32 144.1 172 48.8
Nitab4.5_0000072g0560 Nicotiana tabacum HOM05D007220 ORTHO05D009058 3.0e-32 142.5 111 61.3
SalBow4G2286 Salvia bowleyana HOM05D007220 ORTHO05D009058 3.9e-32 142.1 161 50.9
AUR62016183 Chenopodium quinoa HOM05D007220 ORTHO05D009058 5.1e-32 141.7 154 53.9
Peaxi162Scf00241g00624 Petunia axillaris HOM05D007220 ORTHO05D009058 5.1e-32 141.7 177 48.6
Sopen03g023380 Solanum pennellii HOM05D007220 ORTHO05D009058 8.7e-32 141.0 105 63.8
CAN.G152.17 Capsicum annuum HOM05D007220 ORTHO05D009058 1.1e-31 140.6 104 64.4
CDE09G0763 Ceratophyllum demersum HOM05D007220 ORTHO05D009058 1.1e-31 140.6 135 54.8
ECA233G2338 Erigeron canadensis HOM05D007220 ORTHO05D009058 1.9e-31 139.8 154 51.9
Aa31LG3G7960 Aethionema arabicum HOM05D007220 ORTHO05D009058 2.5e-31 139.4 163 48.5
Aqoxy7G00673 Aquilegia oxysepala HOM05D007220 ORTHO05D009058 8.1e-30 134.4 127 52.8
Lj8A39T34 Lonicera japonica HOM05D007220 ORTHO05D009058 1.2e-28 130.6 131 55.0
PSO782G3417 Papaver somniferum HOM05D007220 ORTHO05D009058 5.8e-28 128.3 112 54.5
PSO478G4327 Papaver somniferum HOM05D007220 ORTHO05D009058 1.7e-27 126.7 112 53.6
arahy.Tifrunner.gnm1.ann1.83G6QR Arachis hypogaea HOM05D007220 ORTHO05D009058 1.4e-26 123.6 80 71.2
HPP92_002073 Vanilla planifolia HOM05D007220 ORTHO05D009058 9.3e-26 120.9 158 43.0
Prupe.2G280700 Prunus persica HOM05D007220 ORTHO05D009058 1.2e-25 120.6 126 57.9
Zm00001eb230760 Zea mays HOM05D007220 ORTHO05D009058 1.3e-24 117.1 148 44.6
SEGI_29714 Sequoiadendron giganteum HOM05D007220 ORTHO05D009058 1.1e-23 114.0 143 48.3
Potri.012G128000 Populus trichocarpa HOM05D007220 ORTHO05D009058 9.6e-23 110.9 174 43.7
TPR.G15117 Trifolium pratense HOM05D007220 ORTHO05D009058 1.2e-20 104.0 187 40.6
ATR0730G016 Amborella trichopoda HOM05D007220 ORTHO05D009058 1.3e-19 100.5 114 48.2
AUR62035102 Chenopodium quinoa HOM05D007220 ORTHO05D009058 1.9e-18 96.7 180 40.6
FAN17G2597 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.2e-17 94.0 109 57.8
Pp3c26_11240 Physcomitrium patens HOM05D007220 ORTHO05D009058 7.9e-17 91.3 117 46.2
DCAR_009422 Daucus carota HOM05D007220 ORTHO05D009058 8.7e-16 87.8 119 46.2
DCAR_009423 Daucus carota HOM05D007220 ORTHO05D009058 8.7e-16 87.8 119 46.2
MD07G1256600 Malus domestica HOM05D007220 ORTHO05D009058 8.7e-16 87.8 53 73.6
AagrBONN_evm.TU.Sc2ySwM_228.5821 Anthoceros agrestis HOM05D007220 ORTHO05D009058 7.4e-15 84.7 89 49.4
TAR629G2293 Trochodendron aralioides HOM05D007220 ORTHO05D009058 8.2e-14 81.3 94 54.3
MBI12_g20320_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 2.4e-13 79.7 44 75.0
Sed0003033 Sechium edule HOM05D007220 ORTHO05D009058 4.1e-13 79.0 139 44.6
Ca_20051_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 5.3e-13 78.6 106 46.2
Mapoly0002s0242 Marchantia polymorpha HOM05D007220 ORTHO05D009058 1.5e-12 77.0 90 43.3
HanXRQChr04g0107801 Helianthus annuus HOM05D000901 ORTHO05D001160 2.9e-11 72.8 150 35.3
PGSC0003DMG400023001 Solanum tuberosum HOM05D007220 ORTHO05D009058 9.3e-10 67.8 56 62.5
MBI12_g25331_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 6.1e-09 65.1 61 54.1
MBI12_g14970_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 1.9e-07 60.1 117 35.9


User provided reference genes

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