Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G2520 Fragaria x ananassa HOM05D000716 ORTHO05D008300 3.2e-66 255.0 132 100.0
FvH4_7g02490 Fragaria vesca HOM05D000716 ORTHO05D008300 7.8e-65 250.4 131 97.7
FAN03G0513 Fragaria x ananassa HOM05D000716 ORTHO05D008300 1.7e-64 249.2 131 97.7
FAN06G4889 Fragaria x ananassa HOM05D000716 ORTHO05D008300 3.9e-64 248.1 131 96.9
RcHm_v2.0_Chr1g0321131 Rosa chinensis HOM05D000716 ORTHO05D008300 4.5e-60 234.6 131 93.9
Prupe.2G030600 Prunus persica HOM05D000716 ORTHO05D008300 4.8e-54 214.5 131 82.4
MD02G1293000 Malus domestica HOM05D000716 ORTHO05D008300 1.6e-49 199.5 133 78.2
MD07G1034100 Malus domestica HOM05D000716 ORTHO05D008300 1.3e-43 179.9 135 70.4
QL04p014065 Quercus lobata HOM05D000716 ORTHO05D008300 2.3e-32 142.5 132 58.3
Ciclev10030698m.g Citrus clementina HOM05D000716 ORTHO05D008300 1.1e-29 133.7 144 54.9
CANSAT80G0647 Cannabis sativa HOM05D000716 ORTHO05D008300 1.5e-28 129.8 136 52.9
CiPaw.13G011200 Carya illinoinensis HOM05D000716 ORTHO05D008300 2.0e-28 129.4 130 53.8
Atru.chr11.2438 Acer truncatum HOM05D000716 ORTHO05D008300 1.7e-27 126.3 135 53.3
TWI38G2247 Tripterygium wilfordii HOM05D000716 ORTHO05D008300 1.7e-27 126.3 120 55.0
TAR623G0975 Trochodendron aralioides HOM05D000716 ORTHO05D008300 8.5e-27 124.0 130 50.8
DCAR_031825 Daucus carota HOM05D000716 ORTHO05D008300 2.5e-26 122.5 137 49.6
TWI63G0606 Tripterygium wilfordii HOM05D000716 ORTHO05D008300 5.5e-26 121.3 120 53.3
Dinv32042 Davidia involucrata HOM05D000716 ORTHO05D008300 9.4e-26 120.6 97 61.9
vmacro13734 Vaccinium macrocarpon HOM05D000716 ORTHO05D008300 2.1e-25 119.4 104 57.7
Rhsim07G0063200 Rhododendron simsii HOM05D000716 ORTHO05D008300 1.4e-24 116.7 107 56.1
Potri.001G024600 Populus trichocarpa HOM05D000716 ORTHO05D008300 2.3e-24 115.9 148 44.6
Eucgr.G03250 Eucalyptus grandis HOM05D000716 ORTHO05D008300 3.0e-24 115.5 142 45.8
Nn7g36514 Nelumbo nucifera HOM05D000716 ORTHO05D008300 3.0e-24 115.5 131 48.9
Actinidia06267 Actinidia chinensis HOM05D000716 ORTHO05D008300 3.9e-24 115.2 141 47.5
Potri.003G201000 Populus trichocarpa HOM05D000716 ORTHO05D008300 6.7e-24 114.4 121 52.9
HanXRQChr16g0525331 Helianthus annuus HOM05D000716 ORTHO05D008300 1.5e-23 113.2 127 52.0
COL.COLO4_35450 Corchorus olitorius HOM05D000716 ORTHO05D008300 2.6e-23 112.5 149 45.6
Sabra03G0148600 Salix brachista HOM05D000716 ORTHO05D008300 3.3e-23 112.1 120 47.5
Dinv01120 Davidia involucrata HOM05D000716 ORTHO05D008300 7.4e-23 110.9 130 46.2
Duzib114G0335 Durio zibethinus HOM05D000716 ORTHO05D008300 9.7e-23 110.5 138 47.8
Duzib128G1102 Durio zibethinus HOM05D000716 ORTHO05D008300 2.2e-22 109.4 137 47.4
CSS0010368 Camellia sinensis var. sinensis HOM05D000716 ORTHO05D008300 2.8e-22 109.0 97 57.7
AUR62037220 Chenopodium quinoa HOM05D000716 ORTHO05D008300 2.8e-22 109.0 135 47.4
Cc02_g30350 Coffea canephora HOM05D000716 ORTHO05D008300 3.7e-22 108.6 130 45.4
AUR62026832 Chenopodium quinoa HOM05D000716 ORTHO05D008300 6.3e-22 107.8 133 48.1
Manes.11G003600 Manihot esculenta HOM05D000716 ORTHO05D008300 6.3e-22 107.8 110 51.8
GSVIVG01001943001 Vitis vinifera HOM05D000716 ORTHO05D008300 6.3e-22 107.8 147 44.9
Actinidia14086 Actinidia chinensis HOM05D000716 ORTHO05D008300 8.2e-22 107.5 141 46.1
Actinidia19449 Actinidia chinensis HOM05D000716 ORTHO05D008300 8.2e-22 107.5 141 46.1
Aqoxy1G00338 Aquilegia oxysepala HOM05D000716 ORTHO05D008300 1.1e-21 107.1 113 47.8
Gorai.011G212500 Gossypium raimondii HOM05D000716 ORTHO05D008300 1.4e-21 106.7 112 51.8
Lsat_1_v5_gn_4_29860 Lactuca sativa HOM05D000716 ORTHO05D008300 1.4e-21 106.7 107 50.5
PSO384G1427 Papaver somniferum HOM05D000716 ORTHO05D008300 1.8e-21 106.3 130 43.1
ECA234G3719 Erigeron canadensis HOM05D000716 ORTHO05D008300 2.4e-21 105.9 113 50.4
Gohir.A10G182500 Gossypium hirsutum HOM05D000716 ORTHO05D008300 5.3e-21 104.8 112 50.9
PSO339G0025 Papaver somniferum HOM05D000716 ORTHO05D008300 5.3e-21 104.8 134 44.0
PGR031G0769 Punica granatum HOM05D000716 ORTHO05D008300 5.3e-21 104.8 131 45.8
Gohir.D10G189200 Gossypium hirsutum HOM05D000716 ORTHO05D008300 2.6e-20 102.4 112 50.0
Thecc.10G170700 Theobroma cacao HOM05D000716 ORTHO05D008300 5.9e-20 101.3 149 42.3
Sed0026818 Sechium edule HOM05D000716 ORTHO05D008300 1.3e-19 100.1 132 41.7
EL10Ac2g02846 Beta vulgaris HOM05D000716 ORTHO05D008300 3.8e-19 98.6 138 43.5
Psat5g217360 Pisum sativum HOM05D000716 ORTHO05D008300 1.1e-18 97.1 135 44.4
ClCG05G020740 Citrullus lanatus HOM05D000716 ORTHO05D008300 1.9e-18 96.3 132 40.2
Ca_04529_v3 Cicer arietinum L. HOM05D000716 ORTHO05D008300 3.2e-18 95.5 135 45.9
Ca_30978_v3 Cicer arietinum L. HOM05D000716 ORTHO05D008300 3.2e-18 95.5 135 45.9
Ah.10g030790 Amaranthus hybridus HOM05D000716 ORTHO05D008300 9.4e-18 94.0 139 41.7
arahy.Tifrunner.gnm1.ann1.G6Z95W Arachis hypogaea HOM05D000716 ORTHO05D008300 9.4e-18 94.0 124 46.0
Lalb_Chr25g0282321 Lupinus albus HOM05D000716 ORTHO05D008300 9.4e-18 94.0 131 42.7
Hund13334 Selenicereus undatus HOM05D000716 ORTHO05D008300 9.4e-18 94.0 121 43.8
VMungo1080G1793 Vigna mungo HOM05D000716 ORTHO05D008300 9.4e-18 94.0 131 45.0
CsaV3_5G014750 Cucumis sativus L. HOM05D000716 ORTHO05D008300 1.6e-17 93.2 132 40.9
arahy.Tifrunner.gnm1.ann1.FKA8YF Arachis hypogaea HOM05D000716 ORTHO05D008300 2.7e-17 92.4 124 45.2
MELO3C015024.2 Cucumis melo HOM05D000716 ORTHO05D008300 4.7e-17 91.7 132 41.7
Sc10g0004290 Simmondsia chinensis HOM05D000716 ORTHO05D008300 4.7e-17 91.7 109 46.8
Glyma.11G152500 Glycine max HOM05D000716 ORTHO05D008300 6.1e-17 91.3 131 41.2
Medtr3g019360 Medicago truncatula HOM05D000716 ORTHO05D008300 6.1e-17 91.3 131 43.5
Oeu056564.1 Olea europaea HOM05D000716 ORTHO05D008300 1.8e-16 89.7 97 46.4
AUR62007677 Chenopodium quinoa HOM05D000716 ORTHO05D008300 2.3e-16 89.4 86 53.5
Lj3g0026059 Lotus japonicus HOM05D000716 ORTHO05D008300 3.0e-16 89.0 133 39.8
Glyma.04G140132 Glycine max HOM05D000716 ORTHO05D008300 3.9e-16 88.6 130 43.1
Sabra01G0018300 Salix brachista HOM05D000716 ORTHO05D008300 6.7e-16 87.8 179 36.9
Oeu003919.1 Olea europaea HOM05D000716 ORTHO05D008300 2.6e-15 85.9 97 45.4
SalBow6G2938 Salvia bowleyana HOM05D000716 ORTHO05D008300 2.6e-15 85.9 130 36.9
Lj3g0003771 Lotus japonicus HOM05D000716 ORTHO05D008300 4.4e-15 85.1 124 43.5
PGSC0003DMG400000836 Solanum tuberosum HOM05D000716 ORTHO05D008300 4.4e-15 85.1 87 48.3
CAN.G1571.6 Capsicum annuum HOM05D000716 ORTHO05D008300 6.3e-14 81.3 130 36.9
TPR.G3874 Trifolium pratense HOM05D000716 ORTHO05D008300 8.2e-14 80.9 119 43.7
Sopen01g030450 Solanum pennellii HOM05D000716 ORTHO05D008300 2.4e-13 79.3 87 44.8
MSTRG.20529 Avicennia marina HOM05D000716 ORTHO05D008300 3.1e-13 79.0 133 39.8
Solyc01g068490.4 Solanum lycopersicum HOM05D000716 ORTHO05D008300 2.6e-12 75.9 87 43.7
GSVIVG01000832001 Vitis vinifera HOM05D000716 ORTHO05D008300 3.2e-10 68.9 61 59.0
ATR0721G009 Amborella trichopoda HOM05D000716 ORTHO05D008300 4.2e-10 68.6 100 37.0
MSTRG.5059 Avicennia marina HOM05D000716 ORTHO05D008300 2.1e-09 66.2 93 41.9
Nitab4.5_0000316g0100 Nicotiana tabacum HOM05D000716 ORTHO05D008300 4.7e-09 65.1 118 41.5
SEGI_29821 Sequoiadendron giganteum HOM05D000716 ORTHO05D004822 4.7e-09 65.1 110 30.9
Nitab4.5_0001888g0050 Nicotiana tabacum HOM05D000716 ORTHO05D008300 8.0e-09 64.3 118 40.7
unitig_8.g4776 Utricularia gibba HOM05D000716 ORTHO05D008300 2.3e-08 62.8 92 34.8
Mapoly0036s0132 Marchantia polymorpha HOM05D000716 ORTHO05D004822 2.6e-07 59.3 108 29.6
SGA_v2.0_scaffold5G02929 Striga asiatica HOM05D000716 ORTHO05D008300 2.6e-07 59.3 108 39.8
Pp3c12_4020 Physcomitrium patens HOM05D000716 ORTHO05D004822 9.7e-07 57.4 110 29.1
AagrBONN_evm.TU.Sc2ySwM_228.2518 Anthoceros agrestis HOM05D000716 ORTHO05D004822 2.2e-06 56.2 110 29.1
Glyma.06G132100 Glycine max HOM05D000716 ORTHO05D004822 3.7e-06 55.5 109 31.2
Pp3c13_14550 Physcomitrium patens HOM05D000716 ORTHO05D008300 6.3e-06 54.7 110 30.0
SEGI_36693 Sequoiadendron giganteum HOM05D000716 ORTHO05D009512 8.2e-06 54.3 111 26.1


User provided reference genes

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