Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G2438 Fragaria x ananassa HOM05D002637 ORTHO05D009046 1.6e-80 302.8 157 100.0
FAN06G1198 Fragaria x ananassa HOM05D000001 ORTHO05D009896 1.9e-70 269.2 155 88.4
FAN06G2425 Fragaria x ananassa HOM05D000001 ORTHO05D009896 5.6e-70 267.7 157 86.6
FAN01G0925 Fragaria x ananassa HOM05D002637 ORTHO05D009046 3.7e-69 265.0 157 86.0
FvH4_7g09940 Fragaria vesca HOM05D002637 ORTHO05D009046 4.0e-68 261.5 150 88.7
Prupe.2G128200 Prunus persica HOM05D002637 ORTHO05D009046 2.0e-46 189.5 151 60.3
FAN10G0921 Fragaria x ananassa HOM05D002637 ORTHO05D009046 2.6e-46 189.1 150 72.0
Actinidia33504 Actinidia chinensis HOM05D002637 ORTHO05D009046 1.1e-44 183.7 149 56.4
RcHm_v2.0_Chr1g0347501 Rosa chinensis HOM05D002637 ORTHO05D009046 9.1e-44 180.6 151 59.6
vmacro21056 Vaccinium macrocarpon HOM05D002637 ORTHO05D009046 1.2e-43 180.3 151 55.6
Migut.B01543 Erythranthe guttata HOM05D002637 ORTHO05D009046 2.0e-43 179.5 151 55.0
FAN10G1525 Fragaria x ananassa HOM05D002637 ORTHO05D009046 2.6e-43 179.1 180 62.2
Cc02_g25010 Coffea canephora HOM05D002637 ORTHO05D009046 2.9e-42 175.6 151 54.3
Manes.12G109800 Manihot esculenta HOM05D002637 ORTHO05D009046 8.5e-42 174.1 151 55.0
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 3.2e-41 172.2 151 53.6
Carub.0007s0284 Capsella rubella HOM05D002637 ORTHO05D009046 1.6e-40 169.9 149 53.0
CARHR245840 Cardamine hirsuta HOM05D002637 ORTHO05D009046 4.7e-40 168.3 146 52.7
PGR042G3993 Punica granatum HOM05D002637 ORTHO05D009046 4.7e-40 168.3 150 53.3
DCAR_029750 Daucus carota HOM05D002637 ORTHO05D000193 6.1e-40 167.9 151 54.3
AL7G13350 Arabidopsis lyrata HOM05D002637 ORTHO05D009046 7.9e-40 167.5 149 52.3
MSTRG.17133 Avicennia marina HOM05D002637 ORTHO05D009046 1.4e-39 166.8 149 53.0
MD07G1104600 Malus domestica HOM05D002637 ORTHO05D009046 1.8e-39 166.4 151 53.0
MD07G1105300 Malus domestica HOM05D002637 ORTHO05D009046 1.8e-39 166.4 151 51.7
Psat4g225240 Pisum sativum HOM05D002637 ORTHO05D009046 1.8e-39 166.4 149 50.3
HanXRQChr16g0520331 Helianthus annuus HOM05D002637 ORTHO05D009046 3.0e-39 165.6 149 53.0
AT4G37445 Arabidopsis thaliana HOM05D002637 ORTHO05D009046 3.9e-39 165.2 149 51.7
Sc02g0003060 Simmondsia chinensis HOM05D002637 ORTHO05D009046 3.9e-39 165.2 141 53.2
Eucgr.E01572 Eucalyptus grandis HOM05D002637 ORTHO05D009046 5.2e-39 164.9 143 56.6
ECA234G1562 Erigeron canadensis HOM05D002637 ORTHO05D009046 6.7e-39 164.5 151 52.3
Thhalv10026444m.g Eutrema salsugineum HOM05D002637 ORTHO05D009046 1.5e-38 163.3 149 50.3
Sp7g35140 Schrenkiella parvula HOM05D002637 ORTHO05D009046 4.4e-38 161.8 149 49.7
Lj3g0027924 Lotus japonicus HOM05D002637 ORTHO05D009046 7.4e-38 161.0 150 50.7
Dinv43628 Davidia involucrata HOM05D002637 ORTHO05D009046 9.7e-38 160.6 151 48.3
TWI53G0102 Tripterygium wilfordii HOM05D002637 ORTHO05D009046 1.3e-37 160.2 151 49.7
Lsat_1_v5_gn_4_46620 Lactuca sativa HOM05D002637 ORTHO05D009046 1.7e-37 159.8 152 52.6
BcaNung03660 Brassica carinata HOM05D002637 ORTHO05D009046 3.7e-37 158.7 147 51.0
Duzib187G0274 Durio zibethinus HOM05D002637 ORTHO05D009046 3.7e-37 158.7 152 54.6
Potri.007G051200 Populus trichocarpa HOM05D002637 ORTHO05D009046 3.7e-37 158.7 146 48.6
BcaNung05079 Brassica carinata HOM05D002637 ORTHO05D009046 4.8e-37 158.3 149 49.0
Medtr8g006765 Medicago truncatula HOM05D002637 ORTHO05D009046 1.4e-36 156.8 150 48.0
Aqoxy3G02748 Aquilegia oxysepala HOM05D002637 ORTHO05D009046 2.4e-36 156.0 148 51.4
EL10Ac1g00772 Beta vulgaris HOM05D002637 ORTHO05D009046 2.4e-36 156.0 151 49.0
Haze_02819 Corylus avellana HOM05D002637 ORTHO05D009046 3.1e-36 155.6 148 50.7
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 4.1e-36 155.2 147 50.3
Duzib147G1684 Durio zibethinus HOM05D002637 ORTHO05D009046 5.3e-36 154.8 155 52.3
THA.LOC104807614 Tarenaya hassleriana HOM05D002637 ORTHO05D009046 5.3e-36 154.8 150 49.3
TAR629G0766 Trochodendron aralioides HOM05D002637 ORTHO05D009046 5.3e-36 154.8 138 52.2
TPR.G33150 Trifolium pratense HOM05D002637 ORTHO05D009046 9.1e-36 154.1 149 46.3
Ciclev10026646m.g Citrus clementina HOM05D002637 ORTHO05D009046 1.2e-35 153.7 156 50.0
Lalb_Chr13g0290561 Lupinus albus HOM05D002637 ORTHO05D009046 1.2e-35 153.7 152 48.0
Ca_14060_v3 Cicer arietinum L. HOM05D002637 ORTHO05D009046 2.0e-35 152.9 149 46.3
PSO063G5174 Papaver somniferum HOM05D002637 ORTHO05D009046 2.6e-35 152.5 137 51.8
C01p01670 Brassica napus HOM05D002637 ORTHO05D009046 4.5e-35 151.8 161 46.6
BolC1t00161H Brassica oleracea HOM05D002637 ORTHO05D009046 4.5e-35 151.8 161 46.6
Nitab4.5_0003696g0080 Nicotiana tabacum HOM05D002637 ORTHO05D009046 7.7e-35 151.0 144 52.1
Atru.chr3.227 Acer truncatum HOM05D002637 ORTHO05D009046 1.3e-34 150.2 148 50.0
A01p01510 Brassica napus HOM05D002637 ORTHO05D009046 1.3e-34 150.2 159 47.2
BraA01t00144Z Brassica rapa HOM05D002637 ORTHO05D009046 1.3e-34 150.2 159 47.2
Cfa011083 Carpinus fangiana HOM05D002637 ORTHO05D009046 1.3e-34 150.2 153 50.3
QL04p030668 Quercus lobata HOM05D002637 ORTHO05D009046 1.3e-34 150.2 147 49.7
Thecc.01G067000 Theobroma cacao HOM05D002637 ORTHO05D009046 1.7e-34 149.8 153 51.0
CiPaw.14G021200 Carya illinoinensis HOM05D002637 ORTHO05D009046 2.2e-34 149.4 148 48.6
Nn1g00869 Nelumbo nucifera HOM05D002637 ORTHO05D009046 2.9e-34 149.1 141 47.5
Lj1g0023703 Lotus japonicus HOM05D002637 ORTHO05D009046 6.5e-34 147.9 147 47.6
TAR629G0936 Trochodendron aralioides HOM05D002637 ORTHO05D009046 1.9e-33 146.4 147 49.7
Medtr4g094628 Medicago truncatula HOM05D002637 ORTHO05D009046 2.5e-33 146.0 155 45.8
CANSAT21G1080 Cannabis sativa HOM05D002637 ORTHO05D009046 3.2e-33 145.6 148 48.0
COL.COLO4_11517 Corchorus olitorius HOM05D002637 ORTHO05D009046 3.2e-33 145.6 146 52.1
Manes.13G115300 Manihot esculenta HOM05D002637 ORTHO05D009046 3.2e-33 145.6 151 46.4
TPR.G12142 Trifolium pratense HOM05D002637 ORTHO05D009046 3.2e-33 145.6 154 46.8
Oeu063229.1 Olea europaea HOM05D002637 ORTHO05D009046 5.5e-33 144.8 151 45.7
Psat3g194760 Pisum sativum HOM05D002637 ORTHO05D009046 5.5e-33 144.8 146 47.9
Sabra07G0045200 Salix brachista HOM05D002328 ORTHO05D002433 5.5e-33 144.8 168 42.9
BcaNung02947 Brassica carinata HOM05D002637 ORTHO05D009046 9.4e-33 144.1 159 44.7
Hund17084 Selenicereus undatus HOM05D002637 ORTHO05D009046 9.4e-33 144.1 142 50.0
Gorai.011G107300 Gossypium raimondii HOM05D002637 ORTHO05D009046 1.2e-32 143.7 145 48.3
arahy.Tifrunner.gnm1.ann1.TJ44DN Arachis hypogaea HOM05D002637 ORTHO05D009046 1.8e-31 139.8 151 46.4
arahy.Tifrunner.gnm1.ann1.P225XX Arachis hypogaea HOM05D002637 ORTHO05D009046 3.0e-31 139.0 151 45.7
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 1.5e-30 136.7 134 47.8
Sopen01g036190 Solanum pennellii HOM05D002637 ORTHO05D009046 1.5e-30 136.7 158 44.9
Rhsim01G0139600 Rhododendron simsii HOM05D002637 ORTHO05D009046 2.0e-30 136.3 121 55.4
AUR62023418 Chenopodium quinoa HOM05D000001 ORTHO05D009896 2.2e-29 132.9 151 44.4
VMungo0331G2001 Vigna mungo HOM05D002637 ORTHO05D009046 2.8e-29 132.5 145 44.8
TAR629G3341 Trochodendron aralioides HOM05D002637 ORTHO05D009046 1.8e-28 129.8 137 47.4
Glyma.03G113700 Glycine max HOM05D002637 ORTHO05D009046 2.4e-28 129.4 146 42.5
Cpa.g.sc6.62 Carica papaya HOM05D003561 ORTHO05D004351 7.0e-28 127.9 151 44.4
Lj7A545G96 Lonicera japonica HOM05D002637 ORTHO05D009046 7.0e-28 127.9 129 50.4
A01p01520 Brassica napus HOM05D002637 ORTHO05D009046 9.1e-28 127.5 147 44.2
BraA01t00145Z Brassica rapa HOM05D002637 ORTHO05D009046 9.1e-28 127.5 147 44.2
Phvul.010G051600 Phaseolus vulgaris HOM05D002637 ORTHO05D009046 1.6e-27 126.7 147 41.5
Ca_24158_v3 Cicer arietinum L. HOM05D002637 ORTHO05D009046 1.5e-25 120.2 114 47.4
Manes.13G115400 Manihot esculenta HOM05D002637 ORTHO05D009046 1.9e-25 119.8 141 41.1
Aa31LG6G14300 Aethionema arabicum HOM05D002637 ORTHO05D009046 3.2e-25 119.0 148 41.9
Ca_14062_v3 Cicer arietinum L. HOM05D000534 ORTHO05D009046 7.2e-25 117.9 113 46.9
Glyma.07G113000 Glycine max HOM05D002637 ORTHO05D009046 7.2e-25 117.9 139 42.4
Peaxi162Scf00030g00043 Petunia axillaris HOM05D002637 ORTHO05D009046 1.6e-24 116.7 111 50.5
GSVIVG01018261001 Vitis vinifera HOM05D002637 ORTHO05D009046 1.4e-23 113.6 121 45.5
AUR62013735 Chenopodium quinoa HOM05D002637 ORTHO05D009046 5.2e-23 111.7 119 47.1
RcHm_v2.0_Chr1g0347531 Rosa chinensis HOM05D002637 ORTHO05D009046 4.4e-22 108.6 90 65.6
Phvul.008G046000 Phaseolus vulgaris HOM05D002637 ORTHO05D009046 7.5e-22 107.8 108 47.2
TPR.G39072 Trifolium pratense HOM05D002637 ORTHO05D009046 7.0e-20 101.3 139 42.4
A01p01540 Brassica napus HOM05D002637 ORTHO05D009046 9.1e-20 100.9 96 52.1
BraA01t00146Z Brassica rapa HOM05D002637 ORTHO05D016052 4.5e-19 98.6 89 55.1
BcaNung03659 Brassica carinata HOM05D002637 ORTHO05D009046 5.9e-19 98.2 98 51.0
GSVIVG01018259001 Vitis vinifera HOM05D002637 ORTHO05D009046 1.7e-18 96.7 108 46.3
CSS0047370 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D009046 2.9e-18 95.9 87 54.0
VMungo1383G0183 Vigna mungo HOM05D002637 ORTHO05D009046 1.5e-17 93.6 94 47.9
Os02g0126600 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D009046 5.5e-17 91.7 135 34.8
SalBow5G5579 Salvia bowleyana HOM05D002637 ORTHO05D009046 2.8e-16 89.4 145 36.6
ATR0057G030 Amborella trichopoda HOM05D002637 ORTHO05D009046 8.0e-16 87.8 132 35.6
Prupe.2G128500 Prunus persica HOM05D000001 ORTHO05D009896 1.4e-15 87.0 138 39.9
Zm00001eb230930 Zea mays HOM05D002637 ORTHO05D009046 2.6e-14 82.8 131 38.2
Nitab4.5_0003553g0040 Nicotiana tabacum HOM05D002637 ORTHO05D009046 7.5e-14 81.3 150 33.3
Atru.chr3.216 Acer truncatum HOM05D002637 ORTHO05D009046 4.9e-13 78.6 67 56.7
CDE06G1866 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 2.4e-12 76.3 139 29.5
Glyma.18G252700 Glycine max HOM05D002637 ORTHO05D009046 1.6e-11 73.6 73 47.9
A03p65120 Brassica napus HOM05D002637 ORTHO05D009046 5.9e-11 71.6 113 38.1
BolC7t46653H Brassica oleracea HOM05D002637 ORTHO05D009046 5.9e-11 71.6 127 35.4
BraA03t15571Z Brassica rapa HOM05D002637 ORTHO05D009046 2.3e-10 69.7 108 38.9
HPP92_005363 Vanilla planifolia HOM05D002637 ORTHO05D009046 6.6e-10 68.2 125 32.0
EL10Ac1g02043 Beta vulgaris HOM05D002637 ORTHO05D009046 5.8e-06 55.1 78 30.8


User provided reference genes

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