Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G2434 Fragaria x ananassa HOM05D005841 ORTHO05D007132 2.8e-94 348.6 174 100.0
FAN06G1077 Fragaria x ananassa HOM05D005841 ORTHO05D007132 1.1e-55 220.3 153 75.2
FAN06G4202 Fragaria x ananassa HOM05D005841 ORTHO05D007132 1.1e-55 220.3 153 75.2
FAN10G3225 Fragaria x ananassa HOM05D005841 ORTHO05D007132 1.5e-55 219.9 153 75.2
FAN01G0675 Fragaria x ananassa HOM05D005841 ORTHO05D007132 5.7e-55 218.0 153 74.5
FAN03G2595 Fragaria x ananassa HOM05D005841 ORTHO05D007132 5.7e-55 218.0 153 74.5
Cpa.g.sc33.143 Carica papaya HOM05D005841 ORTHO05D007132 4.1e-53 211.8 129 79.8
CiPaw.14G011500 Carya illinoinensis HOM05D005841 ORTHO05D007132 5.3e-53 211.5 149 71.8
QL04p022932 Quercus lobata HOM05D005841 ORTHO05D007132 3.4e-52 208.8 128 81.2
Glyma.04G125600 Glycine max HOM05D005841 ORTHO05D007132 6.5e-51 204.5 128 79.7
CANSAT56G0667 Cannabis sativa HOM05D005841 ORTHO05D007132 4.2e-50 201.8 129 76.0
CSS0015441 Camellia sinensis var. sinensis HOM05D005841 ORTHO05D007132 5.5e-50 201.4 128 77.3
Gohir.A06G171000 Gossypium hirsutum HOM05D005841 ORTHO05D007132 9.4e-50 200.7 128 75.8
Gohir.D06G178900 Gossypium hirsutum HOM05D005841 ORTHO05D007132 9.4e-50 200.7 128 75.8
Gorai.010G208800 Gossypium raimondii HOM05D005841 ORTHO05D007132 9.4e-50 200.7 128 75.8
Phvul.005G012800 Phaseolus vulgaris HOM05D005841 ORTHO05D007132 1.2e-49 200.3 128 78.1
Glyma.06G313000 Glycine max HOM05D005841 ORTHO05D007132 1.6e-49 199.9 128 78.1
COL.COLO4_09288 Corchorus olitorius HOM05D005841 ORTHO05D007132 2.7e-49 199.1 151 66.2
Atru.chr12.1096 Acer truncatum HOM05D005841 ORTHO05D007132 4.7e-49 198.4 128 75.8
Thecc.10G128400 Theobroma cacao HOM05D005841 ORTHO05D007132 4.7e-49 198.4 128 74.2
VMungo1080G1721 Vigna mungo HOM05D005841 ORTHO05D007132 4.7e-49 198.4 128 77.3
Duzib128G0994 Durio zibethinus HOM05D005841 ORTHO05D007132 6.1e-49 198.0 128 75.8
Potri.003G189400 Populus trichocarpa HOM05D005841 ORTHO05D007132 1.0e-48 197.2 128 76.6
Lj3g0005753 Lotus japonicus HOM05D005841 ORTHO05D007132 1.4e-48 196.8 128 76.6
TAR629G2175 Trochodendron aralioides HOM05D005841 ORTHO05D007132 1.8e-48 196.4 127 74.8
Medtr3g011510 Medicago truncatula HOM05D005841 ORTHO05D007132 2.3e-48 196.1 128 77.3
TPR.G5121 Trifolium pratense HOM05D005841 ORTHO05D007132 3.0e-48 195.7 128 76.6
Rhsim03G0005600 Rhododendron simsii HOM05D005841 ORTHO05D007132 3.9e-48 195.3 128 74.2
Sabra03G0139600 Salix brachista HOM05D005841 ORTHO05D007132 3.9e-48 195.3 128 75.0
BcaB02g07739 Brassica carinata HOM05D005841 ORTHO05D007132 8.8e-48 194.1 129 73.6
Potri.001G036400 Populus trichocarpa HOM05D005841 ORTHO05D007132 8.8e-48 194.1 128 74.2
Sed0002293 Sechium edule HOM05D005841 ORTHO05D007132 8.8e-48 194.1 128 73.4
Sabra01G0025200 Salix brachista HOM05D005841 ORTHO05D007132 1.1e-47 193.7 128 74.2
Aa31sc488G20 Aethionema arabicum HOM05D005841 ORTHO05D007132 1.5e-47 193.4 129 72.9
Sed0011967 Sechium edule HOM05D005841 ORTHO05D007132 1.5e-47 193.4 128 72.7
Actinidia22040 Actinidia chinensis HOM05D005841 ORTHO05D007132 2.0e-47 193.0 128 75.0
Ciclev10001427m.g Citrus clementina HOM05D005841 ORTHO05D007132 2.0e-47 193.0 128 75.8
Thhalv10010421m.g Eutrema salsugineum HOM05D005841 ORTHO05D007132 2.0e-47 193.0 129 73.6
MSTRG.19910 Avicennia marina HOM05D005841 ORTHO05D007132 3.3e-47 192.2 128 71.1
Cc06_g15810 Coffea canephora HOM05D005841 ORTHO05D007132 3.3e-47 192.2 128 71.9
MSTRG.26082 Avicennia marina HOM05D005841 ORTHO05D007132 4.4e-47 191.8 128 71.1
Manes.04G153300 Manihot esculenta HOM05D005841 ORTHO05D007132 5.7e-47 191.4 130 71.5
Lalb_Chr18g0048171 Lupinus albus HOM05D005841 ORTHO05D007132 7.4e-47 191.0 128 73.4
vmacro07900 Vaccinium macrocarpon HOM05D005841 ORTHO05D007132 7.4e-47 191.0 128 71.9
arahy.Tifrunner.gnm1.ann1.87YK44 Arachis hypogaea HOM05D005841 ORTHO05D007132 9.7e-47 190.7 129 72.1
CARHR164270 Cardamine hirsuta HOM05D005841 ORTHO05D007132 1.3e-46 190.3 129 72.9
arahy.Tifrunner.gnm1.ann1.AX9XXP Arachis hypogaea HOM05D005841 ORTHO05D007132 1.7e-46 189.9 128 71.9
Oeu007758.1 Olea europaea HOM05D005841 ORTHO05D007132 1.7e-46 189.9 128 70.3
Sc20g0000960 Simmondsia chinensis HOM05D005841 ORTHO05D007132 1.7e-46 189.9 128 71.9
AL5G35420 Arabidopsis lyrata HOM05D005841 ORTHO05D007132 2.2e-46 189.5 129 73.6
Lju124A25T34 Lonicera japonica HOM05D005841 ORTHO05D007132 2.8e-46 189.1 128 75.0
AT3G54360 Arabidopsis thaliana HOM05D005841 ORTHO05D007132 4.8e-46 188.3 129 72.9
PSO384G2928 Papaver somniferum HOM05D005841 ORTHO05D007132 4.8e-46 188.3 128 71.1
Dinv24065 Davidia involucrata HOM05D005841 ORTHO05D007132 6.3e-46 188.0 128 71.9
Sp5g08040 Schrenkiella parvula HOM05D005841 ORTHO05D007132 6.3e-46 188.0 129 71.3
TWI38G1535 Tripterygium wilfordii HOM05D005841 ORTHO05D007132 8.2e-46 187.6 128 68.8
Carub.0005s2096 Capsella rubella HOM05D005841 ORTHO05D007132 1.1e-45 187.2 129 72.1
MELO3C011778.2 Cucumis melo HOM05D005841 ORTHO05D007132 1.1e-45 187.2 128 70.3
CsaV3_5G029280 Cucumis sativus L. HOM05D005841 ORTHO05D007132 1.1e-45 187.2 128 70.3
Eucgr.G03178 Eucalyptus grandis HOM05D005841 ORTHO05D007132 1.4e-45 186.8 158 64.6
PGSC0003DMG400023670 Solanum tuberosum HOM05D005841 ORTHO05D007132 1.8e-45 186.4 129 71.3
TWI15G0221 Tripterygium wilfordii HOM05D005841 ORTHO05D007132 3.1e-45 185.7 128 71.1
DCAR_019783 Daucus carota HOM05D005841 ORTHO05D007132 4.1e-45 185.3 128 71.1
Sopen10g031070 Solanum pennellii HOM05D005841 ORTHO05D007132 4.1e-45 185.3 129 71.3
THA.LOC104824200 Tarenaya hassleriana HOM05D005841 ORTHO05D007132 4.1e-45 185.3 129 74.4
Hma1.2p1_3953F.1_g338070 Hydrangea macrophylla HOM05D005841 ORTHO05D007132 5.3e-45 184.9 128 71.9
Peaxi162Scf00258g00731 Petunia axillaris HOM05D005841 ORTHO05D007132 5.3e-45 184.9 128 70.3
Ca_26913_v3 Cicer arietinum L. HOM05D005841 ORTHO05D007132 7.0e-45 184.5 128 71.9
PSO339G0077 Papaver somniferum HOM05D005841 ORTHO05D007132 7.0e-45 184.5 128 70.3
A07p22080 Brassica napus HOM05D005841 ORTHO05D007132 9.1e-45 184.1 130 71.5
BraA07t29891Z Brassica rapa HOM05D005841 ORTHO05D007132 9.1e-45 184.1 130 71.5
C08p29570 Brassica napus HOM05D005841 ORTHO05D007132 1.2e-44 183.7 130 70.8
BolC8t50563H Brassica oleracea HOM05D005841 ORTHO05D007132 1.2e-44 183.7 130 70.8
A09p47340 Brassica napus HOM05D005841 ORTHO05D007132 1.6e-44 183.3 130 70.8
Solyc10g080520.3 Solanum lycopersicum HOM05D005841 ORTHO05D007132 1.6e-44 183.3 129 69.8
THA.LOC104809184 Tarenaya hassleriana HOM05D005841 ORTHO05D007132 1.6e-44 183.3 129 69.8
BcaC08g44679 Brassica carinata HOM05D005841 ORTHO05D007132 4.5e-44 181.8 149 63.1
Nitab4.5_0000324g0020 Nicotiana tabacum HOM05D005841 ORTHO05D007132 4.5e-44 181.8 128 70.3
BraA09t40195Z Brassica rapa HOM05D005841 ORTHO05D007132 5.9e-44 181.4 130 70.0
Nitab4.5_0004458g0010 Nicotiana tabacum HOM05D005841 ORTHO05D007132 1.1e-42 177.2 128 68.8
MBI19_g24060_MAGBIO Magnolia biondii HOM05D005841 ORTHO05D007132 1.5e-42 176.8 128 69.5
BcaB01g00199 Brassica carinata HOM05D005841 ORTHO05D007132 1.9e-42 176.4 130 68.5
Lsat_1_v5_gn_5_163601 Lactuca sativa HOM05D005841 ORTHO05D007132 1.9e-42 176.4 128 67.2
Aqoxy3G04362 Aquilegia oxysepala HOM05D005841 ORTHO05D007132 2.5e-42 176.0 128 68.0
Nn2g15922 Nelumbo nucifera HOM05D005841 ORTHO05D007132 5.5e-42 174.9 128 64.1
C06p22120 Brassica napus HOM05D005841 ORTHO05D007132 1.6e-41 173.3 122 72.1
BolC6t37399H Brassica oleracea HOM05D005841 ORTHO05D007132 1.6e-41 173.3 122 72.1
Haze_02951 Corylus avellana HOM05D005841 ORTHO05D007132 6.1e-41 171.4 229 46.3
Dinv14310 Davidia involucrata HOM05D005841 ORTHO05D007132 6.1e-41 171.4 128 68.8
ECA248G0891 Erigeron canadensis HOM05D005841 ORTHO05D007132 1.0e-40 170.6 128 64.8
Zm00001eb126920 Zea mays HOM05D005841 ORTHO05D007132 1.8e-40 169.9 128 64.1
AUR62041651 Chenopodium quinoa HOM05D005841 ORTHO05D007132 2.3e-40 169.5 129 63.6
unitig_699.g19444 Utricularia gibba HOM05D005841 ORTHO05D007132 3.0e-40 169.1 129 58.9
AUR62035532 Chenopodium quinoa HOM05D005841 ORTHO05D007132 4.0e-40 168.7 129 64.3
EL10Ac9g20941 Beta vulgaris HOM05D005841 ORTHO05D007132 5.2e-40 168.3 128 65.6
HanXRQChr13g0390471 Helianthus annuus HOM05D005841 ORTHO05D007132 5.2e-40 168.3 128 64.1
Gohir.D10G200050 Gossypium hirsutum HOM05D005841 ORTHO05D007132 8.8e-40 167.5 116 69.0
FvH4_7g04620 Fragaria vesca HOM05D005841 ORTHO05D007132 1.2e-39 167.2 128 71.1
RcHm_v2.0_Chr1g0330051 Rosa chinensis HOM05D005841 ORTHO05D007132 2.6e-39 166.0 128 70.3
Ah.07g203740 Amaranthus hybridus HOM05D005841 ORTHO05D007132 4.4e-39 165.2 128 64.8
Hund07799 Selenicereus undatus HOM05D005841 ORTHO05D007132 4.4e-39 165.2 128 65.6
Gorai.011G224300 Gossypium raimondii HOM05D005841 ORTHO05D007132 5.7e-39 164.9 113 69.9
CDE02G3427 Ceratophyllum demersum HOM05D005841 ORTHO05D007132 7.5e-39 164.5 129 62.0
Prupe.2G051700 Prunus persica HOM05D005841 ORTHO05D007132 5.3e-37 158.3 129 66.7
MD07G1085200 Malus domestica HOM05D005841 ORTHO05D007132 7.0e-37 157.9 128 64.8
SEGI_15550 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 7.7e-36 154.5 131 59.5
Os01g0104100 Oryza sativa ssp. japonica HOM05D005841 ORTHO05D007132 6.5e-35 151.4 128 57.8
ClCG11G012870 Citrullus lanatus HOM05D005841 ORTHO05D007132 2.5e-34 149.4 112 67.9
GSVIVG01027370001 Vitis vinifera HOM05D005841 ORTHO05D007132 4.7e-33 145.2 128 60.2
Psat5g225080 Pisum sativum HOM05D005841 ORTHO05D007132 3.0e-32 142.5 94 75.5
AagrBONN_evm.TU.Sc2ySwM_344.2135 Anthoceros agrestis HOM05D005841 ORTHO05D007132 1.5e-26 123.6 171 42.1
Pp3c4_17260 Physcomitrium patens HOM05D005841 ORTHO05D007132 1.2e-25 120.6 115 50.4
Mapoly0042s0033 Marchantia polymorpha HOM05D005841 ORTHO05D007132 6.1e-25 118.2 117 49.6
SGA_v2.0_scaffold69G23059 Striga asiatica HOM05D005841 ORTHO05D007132 5.7e-23 111.7 128 46.1
Migut.J01841 Erythranthe guttata HOM05D005841 ORTHO05D007132 1.1e-21 107.5 128 45.3
Os02g0795300 Oryza sativa ssp. japonica HOM05D005841 ORTHO05D007132 3.1e-21 105.9 128 45.3
Lsat_1_v5_gn_1_17940 Lactuca sativa HOM05D005841 ORTHO05D007132 5.4e-21 105.1 72 65.3
FAN06G2188 Fragaria x ananassa HOM05D005841 ORTHO05D007132 2.0e-20 103.2 77 70.1
SEGI_26376 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 2.1e-17 93.2 130 42.3
SMO194G0025 Selaginella moellendorffii HOM05D005841 ORTHO05D007132 8.0e-17 91.3 119 43.7
AUR62039567 Chenopodium quinoa HOM05D005841 ORTHO05D007132 1.0e-16 90.9 156 37.8
HPP92_001714 Vanilla planifolia HOM05D005841 ORTHO05D007132 1.8e-13 80.1 64 64.1
CBR_g19049 Chara braunii HOM05D005841 ORTHO05D007132 3.0e-11 72.8 173 30.6
TPR.G5122 Trifolium pratense HOM05D003377 ORTHO05D004080 3.6e-09 65.9 51 66.7
ATR0068G030 Amborella trichopoda HOM05D005841 ORTHO05D007132 8.0e-09 64.7 50 64.0


User provided reference genes

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