Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G2381 Fragaria x ananassa HOM05D001952 ORTHO05D004913 1.2e-49 199.5 99 100.0
FvH4_7g12770 Fragaria vesca HOM05D001952 ORTHO05D004913 2.7e-46 188.3 98 94.9
FAN06G0845 Fragaria x ananassa HOM05D001952 ORTHO05D004913 2.7e-46 188.3 98 94.9
FAN06G0866 Fragaria x ananassa HOM05D001952 ORTHO05D004913 2.7e-46 188.3 98 94.9
FAN01G0405 Fragaria x ananassa HOM05D001952 ORTHO05D004913 1.4e-45 186.0 97 94.8
FAN06G4730 Fragaria x ananassa HOM05D001952 ORTHO05D004913 2.6e-44 181.8 98 89.8
RcHm_v2.0_Chr1g0351801 Rosa chinensis HOM05D001952 ORTHO05D004913 3.4e-44 181.4 98 88.8
FvH4_7g08540 Fragaria vesca HOM05D001952 ORTHO05D004913 7.5e-44 180.3 98 88.8
FAN03G2676 Fragaria x ananassa HOM05D001952 ORTHO05D004913 7.5e-44 180.3 98 88.8
FAN10G1564 Fragaria x ananassa HOM05D001952 ORTHO05D004913 1.4e-42 176.0 98 86.7
FAN10G0713 Fragaria x ananassa HOM05D001952 ORTHO05D004913 7.0e-42 173.7 98 86.7
MD15G1435200 Malus domestica HOM05D001952 ORTHO05D004913 8.3e-35 150.2 97 71.1
CANSAT56G1737 Cannabis sativa HOM05D001952 ORTHO05D004913 1.8e-34 149.1 99 69.7
MD07G1124700 Malus domestica HOM05D001952 ORTHO05D004913 4.1e-34 147.9 97 68.0
Lj5g0018602 Lotus japonicus HOM05D001952 ORTHO05D004913 9.2e-34 146.7 97 71.1
Prupe.2G152200 Prunus persica HOM05D001952 ORTHO05D004913 1.6e-33 146.0 97 69.1
TPR.G34261 Trifolium pratense HOM05D001952 ORTHO05D004913 5.9e-33 144.1 97 69.1
Lalb_Chr19g0127181 Lupinus albus HOM05D001952 ORTHO05D004913 1.0e-32 143.3 97 72.2
QL08p050945 Quercus lobata HOM05D001952 ORTHO05D004913 1.0e-32 143.3 98 66.3
Ciclev10004825m.g Citrus clementina HOM05D001952 ORTHO05D004913 1.7e-32 142.5 97 67.0
Glyma.18G215400 Glycine max HOM05D001952 ORTHO05D004913 2.3e-32 142.1 97 70.1
TPR.G6584 Trifolium pratense HOM05D001952 ORTHO05D004913 2.9e-32 141.7 97 69.1
CSS0007104 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D004913 5.0e-32 141.0 98 65.3
CSS0039830 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D004913 5.0e-32 141.0 98 65.3
Hma1.2p1_0132F.1_g060740 Hydrangea macrophylla HOM05D001952 ORTHO05D004913 6.6e-32 140.6 98 67.3
TAR375G0220 Trochodendron aralioides HOM05D001952 ORTHO05D004913 6.6e-32 140.6 98 66.3
Psat3g112920 Pisum sativum HOM05D001952 ORTHO05D004913 8.6e-32 140.2 97 69.1
TAR624G0159 Trochodendron aralioides HOM05D001952 ORTHO05D004913 8.6e-32 140.2 98 65.3
Oeu024552.2 Olea europaea HOM05D001952 ORTHO05D004913 2.5e-31 138.7 97 66.0
Psat4g209120 Pisum sativum HOM05D001952 ORTHO05D004913 2.5e-31 138.7 97 68.0
Ca_07850_v3 Cicer arietinum L. HOM05D001952 ORTHO05D004913 3.3e-31 138.3 97 69.1
arahy.Tifrunner.gnm1.ann1.7790ZZ Arachis hypogaea HOM05D001952 ORTHO05D004913 4.3e-31 137.9 98 68.4
arahy.Tifrunner.gnm1.ann1.U9VUHP Arachis hypogaea HOM05D001952 ORTHO05D004913 4.3e-31 137.9 98 68.4
arahy.Tifrunner.gnm1.ann1.Z6RYGL Arachis hypogaea HOM05D001952 ORTHO05D004913 4.3e-31 137.9 98 68.4
Haze_00291 Corylus avellana HOM05D001952 ORTHO05D004913 5.6e-31 137.5 98 65.3
Haze_16907 Corylus avellana HOM05D001952 ORTHO05D004913 5.6e-31 137.5 98 65.3
Nitab4.5_0000603g0070 Nicotiana tabacum HOM05D001952 ORTHO05D004913 5.6e-31 137.5 97 66.0
TPR.G18232 Trifolium pratense HOM05D001952 ORTHO05D004913 5.6e-31 137.5 97 66.0
VMungo1383G2849 Vigna mungo HOM05D001952 ORTHO05D004913 7.3e-31 137.1 97 69.1
CARHR248310 Cardamine hirsuta HOM05D001952 ORTHO05D004913 9.5e-31 136.7 96 68.8
Medtr7g075940 Medicago truncatula HOM05D001952 ORTHO05D004913 9.5e-31 136.7 97 66.0
Potri.014G074900 Populus trichocarpa HOM05D001952 ORTHO05D004913 9.5e-31 136.7 98 64.3
Phvul.005G009900 Phaseolus vulgaris HOM05D001952 ORTHO05D004913 2.1e-30 135.6 97 67.0
TPR.G13243 Trifolium pratense HOM05D001952 ORTHO05D004913 2.1e-30 135.6 97 63.9
Dinv32411 Davidia involucrata HOM05D001952 ORTHO05D004913 2.8e-30 135.2 98 65.3
Phvul.005G010100 Phaseolus vulgaris HOM05D001952 ORTHO05D005568 2.8e-30 135.2 97 67.0
Lj6A55T16 Lonicera japonica HOM05D001952 ORTHO05D004913 3.6e-30 134.8 98 60.2
Nitab4.5_0003477g0020 Nicotiana tabacum HOM05D001952 ORTHO05D004913 4.7e-30 134.4 97 63.9
Aqoxy5G00703 Aquilegia oxysepala HOM05D001952 ORTHO05D004913 6.1e-30 134.0 99 62.6
Lj4g0006210 Lotus japonicus HOM05D001952 ORTHO05D004913 6.1e-30 134.0 96 68.8
Thecc.07G183300 Theobroma cacao HOM05D001952 ORTHO05D004913 1.0e-29 133.3 98 64.3
THA.LOC104801468 Tarenaya hassleriana HOM05D001952 ORTHO05D004913 1.4e-29 132.9 97 64.9
Rhsim05G0144200 Rhododendron simsii HOM05D001952 ORTHO05D004913 1.8e-29 132.5 95 66.3
Duzib213G0290 Durio zibethinus HOM05D001952 ORTHO05D004913 2.3e-29 132.1 98 66.3
Eucgr.H05060 Eucalyptus grandis HOM05D001952 ORTHO05D004913 2.3e-29 132.1 97 61.9
Atru.chr1.534 Acer truncatum HOM05D001952 ORTHO05D004913 3.0e-29 131.7 98 64.3
Carub.0005s0957 Capsella rubella HOM05D001952 ORTHO05D004913 3.0e-29 131.7 98 64.3
Cc02_g37060 Coffea canephora HOM05D001952 ORTHO05D004913 3.0e-29 131.7 96 64.6
AT4G00231 Arabidopsis thaliana HOM05D001952 ORTHO05D004913 4.0e-29 131.3 97 64.9
HanXRQChr04g0122171 Helianthus annuus HOM05D001952 ORTHO05D004913 4.0e-29 131.3 98 62.2
PGSC0003DMG400016476 Solanum tuberosum HOM05D001952 ORTHO05D004913 4.0e-29 131.3 97 61.9
AL6G53250 Arabidopsis lyrata HOM05D001952 ORTHO05D004913 5.2e-29 131.0 97 63.9
Cfa001612 Carpinus fangiana HOM05D001952 ORTHO05D004913 5.2e-29 131.0 98 62.2
COL.COLO4_19760 Corchorus olitorius HOM05D001952 ORTHO05D004913 5.2e-29 131.0 99 65.7
CsaV3_3G049900 Cucumis sativus L. HOM05D001952 ORTHO05D004913 5.2e-29 131.0 99 60.6
PGSC0003DMG402027917 Solanum tuberosum HOM05D001952 ORTHO05D004913 5.2e-29 131.0 97 62.9
Cpa.g.sc753.2 Carica papaya HOM05D001952 ORTHO05D004913 6.8e-29 130.6 97 61.9
ClCG09G012850 Citrullus lanatus HOM05D001952 ORTHO05D004913 6.8e-29 130.6 98 61.2
Carub.0006s2681 Capsella rubella HOM05D001952 ORTHO05D004913 1.2e-28 129.8 98 63.3
Sabra14G0053600 Salix brachista HOM05D001952 ORTHO05D004913 1.2e-28 129.8 98 60.2
MELO3C003326.2 Cucumis melo HOM05D001952 ORTHO05D004913 1.5e-28 129.4 99 60.6
ECA236G1094 Erigeron canadensis HOM05D001952 ORTHO05D004913 1.5e-28 129.4 97 57.7
MD02G1196600 Malus domestica HOM05D001952 ORTHO05D004913 1.5e-28 129.4 87 67.8
Sopen02g025360 Solanum pennellii HOM05D001952 ORTHO05D004913 1.5e-28 129.4 97 60.8
Gohir.A01G099700 Gossypium hirsutum HOM05D001952 ORTHO05D004913 2.0e-28 129.0 98 63.3
Aqoxy2G02797 Aquilegia oxysepala HOM05D001952 ORTHO05D004913 2.6e-28 128.6 99 60.6
EL10Ac1g00960 Beta vulgaris HOM05D001952 ORTHO05D004913 2.6e-28 128.6 97 63.9
Gorai.002G109800 Gossypium raimondii HOM05D001952 ORTHO05D004913 2.6e-28 128.6 98 63.3
CAN.G1014.4 Capsicum annuum HOM05D001952 ORTHO05D004913 4.4e-28 127.9 97 60.8
Gohir.D01G084100 Gossypium hirsutum HOM05D001952 ORTHO05D004913 7.5e-28 127.1 98 62.2
TWI34G0947 Tripterygium wilfordii HOM05D001952 ORTHO05D004913 7.5e-28 127.1 98 63.3
Peaxi162Scf00231g00244 Petunia axillaris HOM05D001952 ORTHO05D004913 9.8e-28 126.7 97 59.8
CiPaw.02G175900 Carya illinoinensis HOM05D001952 ORTHO05D004913 2.2e-27 125.6 98 60.2
BolC9t52959H Brassica oleracea HOM05D001952 ORTHO05D004913 2.9e-27 125.2 95 64.2
Solyc02g080650.3 Solanum lycopersicum HOM05D001952 ORTHO05D004913 2.9e-27 125.2 97 58.8
C09p00240 Brassica napus HOM05D001952 ORTHO05D004913 3.7e-27 124.8 95 64.2
AUR62004280 Chenopodium quinoa HOM05D001952 ORTHO05D004913 3.7e-27 124.8 97 61.9
DCAR_006897 Daucus carota HOM05D001952 ORTHO05D004913 3.7e-27 124.8 98 62.2
Thhalv10025092m.g Eutrema salsugineum HOM05D001952 ORTHO05D004913 3.7e-27 124.8 97 62.9
BcaC04g24187 Brassica carinata HOM05D001952 ORTHO05D004913 8.3e-27 123.6 95 63.2
BraA09t35698Z Brassica rapa HOM05D001952 ORTHO05D004913 8.3e-27 123.6 95 64.2
A09p00620 Brassica napus HOM05D001952 ORTHO05D004913 1.1e-26 123.2 95 64.2
TPR.G37851 Trifolium pratense HOM05D001952 ORTHO05D004913 2.4e-26 122.1 80 70.0
AUR62033377 Chenopodium quinoa HOM05D001952 ORTHO05D004913 4.1e-26 121.3 97 60.8
Gohir.D01G083600 Gossypium hirsutum HOM05D001952 ORTHO05D004913 5.4e-26 120.9 98 61.2
Gorai.002G109400 Gossypium raimondii HOM05D001952 ORTHO05D004913 5.4e-26 120.9 97 61.9
Hund16968 Selenicereus undatus HOM05D001952 ORTHO05D004913 5.4e-26 120.9 97 58.8
BcaB01g02233 Brassica carinata HOM05D001952 ORTHO05D004913 9.2e-26 120.2 95 61.1
Manes.05G041100 Manihot esculenta HOM05D001952 ORTHO05D004913 9.2e-26 120.2 98 58.2
SalBow7G2566 Salvia bowleyana HOM05D001952 ORTHO05D004913 9.2e-26 120.2 98 58.2
Potri.008G158901 Populus trichocarpa HOM05D001952 ORTHO05D004913 1.2e-25 119.8 98 56.1
PGR004G1086 Punica granatum HOM05D001952 ORTHO05D004913 1.2e-25 119.8 93 59.1
Lj1g0014823 Lotus japonicus HOM05D001952 ORTHO05D004913 2.0e-25 119.0 97 63.9
PSO478G1189 Papaver somniferum HOM05D001952 ORTHO05D004913 2.0e-25 119.0 96 61.5
PSO782G4203 Papaver somniferum HOM05D001952 ORTHO05D004913 2.0e-25 119.0 96 61.5
Sed0000408 Sechium edule HOM05D001952 ORTHO05D004913 2.0e-25 119.0 98 54.1
Migut.D01755 Erythranthe guttata HOM05D001952 ORTHO05D004913 2.7e-25 118.6 96 58.3
PSO782G1679 Papaver somniferum HOM05D001952 ORTHO05D004913 3.5e-25 118.2 96 61.5
Ah.05g175860 Amaranthus hybridus HOM05D001952 ORTHO05D004913 4.6e-25 117.9 97 59.8
Lsat_1_v5_gn_7_6921 Lactuca sativa HOM05D001952 ORTHO05D004913 4.6e-25 117.9 96 58.3
Sc02g0002270 Simmondsia chinensis HOM05D001952 ORTHO05D004913 5.9e-25 117.5 96 57.3
Aa31LG4G9800 Aethionema arabicum HOM05D001952 ORTHO05D004913 3.0e-24 115.2 97 58.8
ATR0820G267 Amborella trichopoda HOM05D001952 ORTHO05D004913 3.0e-24 115.2 118 49.2
Migut.L00878 Erythranthe guttata HOM05D001952 ORTHO05D004913 5.0e-24 114.4 96 56.2
Migut.L00973 Erythranthe guttata HOM05D001952 ORTHO05D004913 6.6e-24 114.0 96 56.2
unitig_0.g170 Utricularia gibba HOM05D001952 ORTHO05D004913 1.5e-23 112.8 96 54.2
vmacro08923 Vaccinium macrocarpon HOM05D001952 ORTHO05D004913 5.6e-23 110.9 95 54.7
Aa31LG11G5430 Aethionema arabicum HOM05D001952 ORTHO05D004913 9.5e-23 110.2 97 59.8
SGA_v2.0_scaffold7G04047 Striga asiatica HOM05D001952 ORTHO05D004913 1.6e-22 109.4 99 51.5
Os03g0118900 Oryza sativa ssp. japonica HOM05D001952 ORTHO05D004913 4.7e-22 107.8 95 51.6
MBI05_g28393_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D004913 6.2e-22 107.5 98 55.1
PSO781G0092 Papaver somniferum HOM05D001952 ORTHO05D004913 2.3e-21 105.5 95 60.0
Peaxi162Scf00207g01356 Petunia axillaris HOM05D001952 ORTHO05D004913 6.8e-21 104.0 146 39.7
CDE01G0692 Ceratophyllum demersum HOM05D001952 ORTHO05D004913 1.2e-20 103.2 98 48.0
Zm00001eb001350 Zea mays HOM05D001952 ORTHO05D004913 4.4e-20 101.3 97 51.5
MBI17_g11655_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D004913 7.5e-20 100.5 87 57.5
RcHm_v2.0_Chr1g0313121 Rosa chinensis HOM05D001952 ORTHO05D004913 7.5e-20 100.5 98 57.1
Gohir.A01G099100 Gossypium hirsutum HOM05D001952 ORTHO05D004913 9.8e-20 100.1 89 57.3
arahy.Tifrunner.gnm1.ann1.LMZ4B6 Arachis hypogaea HOM05D001952 ORTHO05D004913 6.4e-19 97.4 68 64.7
MBI17_g11657_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D004913 7.0e-18 94.0 84 53.6
Lj6A55T17 Lonicera japonica HOM05D001952 ORTHO05D004913 7.8e-17 90.5 66 57.6
Nitab4.5_0001040g0030 Nicotiana tabacum HOM05D001952 ORTHO05D004913 1.0e-16 90.1 79 57.0
Peaxi162Scf00153g01322 Petunia axillaris HOM05D001952 ORTHO05D004913 3.9e-16 88.2 82 57.3
Aa31LG10G10140 Aethionema arabicum HOM05D001952 ORTHO05D004913 1.5e-15 86.3 80 55.0
Eucgr.I00845 Eucalyptus grandis HOM05D001952 ORTHO05D004913 4.3e-15 84.7 97 45.4
Eucgr.I00835 Eucalyptus grandis HOM05D001952 ORTHO05D004913 1.2e-14 83.2 65 56.9
SMO351G0039 Selaginella moellendorffii HOM05D001952 ORTHO05D004913 1.8e-13 79.3 95 45.3
AagrBONN_evm.TU.Sc2ySwM_117.782 Anthoceros agrestis HOM05D001952 ORTHO05D004913 6.8e-13 77.4 98 42.9
CBR_g31682 Chara braunii HOM05D001952 ORTHO05D004913 3.4e-12 75.1 116 34.5
Sp6g00320 Schrenkiella parvula HOM05D001952 ORTHO05D004913 4.4e-12 74.7 97 43.3
SEGI_14537 Sequoiadendron giganteum HOM05D001952 ORTHO05D004913 5.8e-12 74.3 141 34.0
PSO781G0254 Papaver somniferum HOM05D001952 ORTHO05D004913 3.7e-11 71.6 95 42.1
Mapoly0062s0112 Marchantia polymorpha HOM05D001952 ORTHO05D004913 5.4e-10 67.8 96 40.6
SEGI_08371 Sequoiadendron giganteum HOM05D001952 ORTHO05D004913 4.6e-09 64.7 62 45.2
SEGI_36330 Sequoiadendron giganteum HOM05D001952 ORTHO05D004913 7.8e-09 63.9 141 29.8
Pp3c21_1420 Physcomitrium patens HOM05D001952 ORTHO05D004913 1.3e-08 63.2 115 35.7
PSO781G0068 Papaver somniferum HOM05D001952 ORTHO05D004913 5.1e-08 61.2 95 42.1
Hund09554 Selenicereus undatus HOM05D001952 ORTHO05D004913 4.3e-07 58.2 97 36.1
PSO541G1892 Papaver somniferum HOM05D001952 ORTHO05D004913 1.6e-06 56.2 91 36.3


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