Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G2022 Fragaria x ananassa HOM05D007580 ORTHO05D009620 4.5e-89 331.3 169 100.0
FAN01G0874 Fragaria x ananassa HOM05D007580 ORTHO05D009620 9.7e-84 313.5 169 94.7
FAN10G2444 Fragaria x ananassa HOM05D007580 ORTHO05D009620 1.6e-83 312.8 169 96.4
FAN06G5062 Fragaria x ananassa HOM05D007580 ORTHO05D009620 3.1e-82 308.5 171 95.3
FAN06G3292 Fragaria x ananassa HOM05D007580 ORTHO05D009620 2.0e-81 305.8 171 94.7
RcHm_v2.0_Chr1g0352211 Rosa chinensis HOM05D007580 ORTHO05D009620 1.1e-74 283.5 171 87.1
Potri.002G153000 Populus trichocarpa HOM05D007580 ORTHO05D009620 3.7e-43 178.7 163 65.0
MD07G1128600 Malus domestica HOM05D007580 ORTHO05D009620 8.3e-43 177.6 159 67.3
Prupe.2G154500 Prunus persica HOM05D007580 ORTHO05D009620 8.3e-43 177.6 174 63.8
Haze_15227 Corylus avellana HOM05D007580 ORTHO05D009620 4.1e-42 175.3 166 63.3
Sabra02G0121300 Salix brachista HOM05D007580 ORTHO05D009620 1.2e-41 173.7 163 64.4
QL08p050656 Quercus lobata HOM05D007580 ORTHO05D009620 1.7e-40 169.9 189 58.7
Sabra14G0055200 Salix brachista HOM05D007580 ORTHO05D009620 1.7e-40 169.9 171 61.4
Manes.01G262404 Manihot esculenta HOM05D007580 ORTHO05D009620 2.9e-40 169.1 175 61.1
Cfa004181 Carpinus fangiana HOM05D007580 ORTHO05D009620 1.1e-39 167.2 166 61.4
Lalb_Chr01g0021151 Lupinus albus HOM05D007580 ORTHO05D009620 6.1e-38 161.4 181 58.6
Manes.05G040200 Manihot esculenta HOM05D007580 ORTHO05D009620 1.4e-37 160.2 165 58.8
COL.COLO4_12626 Corchorus olitorius HOM05D007580 ORTHO05D009620 4.0e-37 158.7 191 56.0
TWI14G1086 Tripterygium wilfordii HOM05D007580 ORTHO05D009620 3.4e-36 155.6 160 61.2
Gorai.004G156400 Gossypium raimondii HOM05D007580 ORTHO05D009620 5.7e-36 154.8 183 57.4
Ciclev10023708m.g Citrus clementina HOM05D007580 ORTHO05D009620 7.5e-36 154.5 164 57.3
Gohir.A08G129400 Gossypium hirsutum HOM05D007580 ORTHO05D009620 7.5e-36 154.5 190 55.8
Gohir.D08G150700 Gossypium hirsutum HOM05D007580 ORTHO05D009620 1.7e-35 153.3 183 57.4
Potri.014G077000 Populus trichocarpa HOM05D007580 ORTHO05D009620 4.9e-35 151.8 170 57.1
Duzib138G0841 Durio zibethinus HOM05D007580 ORTHO05D009620 6.3e-35 151.4 186 55.4
TPR.G37829 Trifolium pratense HOM05D007580 ORTHO05D009620 1.4e-34 150.2 155 58.7
Medtr7g076270 Medicago truncatula HOM05D007580 ORTHO05D009620 1.8e-34 149.8 162 57.4
Duzib133G0099 Durio zibethinus HOM05D007580 ORTHO05D009620 3.1e-34 149.1 193 52.8
MELO3C022528.2 Cucumis melo HOM05D007580 ORTHO05D009620 2.7e-33 146.0 172 57.6
CANSAT56G4452 Cannabis sativa HOM05D007580 ORTHO05D009620 4.5e-33 145.2 158 56.3
CsaV3_6G005830 Cucumis sativus L. HOM05D007580 ORTHO05D009620 4.5e-33 145.2 167 58.1
Thecc.01G368700 Theobroma cacao HOM05D007580 ORTHO05D009620 7.8e-33 144.4 196 52.6
Sed0005443 Sechium edule HOM05D007580 ORTHO05D009620 1.3e-32 143.7 151 57.6
Solyc01g091790.2 Solanum lycopersicum HOM05D007580 ORTHO05D009620 1.3e-32 143.7 157 52.9
ClCG06G000100 Citrullus lanatus HOM05D007580 ORTHO05D009620 2.3e-32 142.9 172 55.2
Sopen01g037570 Solanum pennellii HOM05D007580 ORTHO05D009620 4.3e-31 138.7 154 53.2
CiPaw.01G053500 Carya illinoinensis HOM05D007580 ORTHO05D009620 2.1e-30 136.3 142 59.9
Hma1.2p1_0398F.1_g143830 Hydrangea macrophylla HOM05D007580 ORTHO05D009620 4.7e-30 135.2 180 50.0
Psat0s1132g0080 Pisum sativum HOM05D007580 ORTHO05D009620 3.1e-29 132.5 169 52.7
Glyma.18G227800 Glycine max HOM05D007580 ORTHO05D009620 4.0e-29 132.1 160 55.6
Aqoxy7G00453 Aquilegia oxysepala HOM05D007580 ORTHO05D009620 3.4e-28 129.0 165 47.9
VMungo1383G0280 Vigna mungo HOM05D007580 ORTHO05D009620 7.5e-28 127.9 156 51.3
PGSC0003DMG400017056 Solanum tuberosum HOM05D007580 ORTHO05D009620 9.8e-28 127.5 161 49.1
FAN10G0406 Fragaria x ananassa HOM05D007580 ORTHO05D009620 1.3e-27 127.1 73 94.5
TAR656G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 1.7e-27 126.7 155 51.6
TAR003G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 2.9e-27 125.9 155 51.0
Migut.B01687 Erythranthe guttata HOM05D007580 ORTHO05D009620 1.9e-26 123.2 163 50.3
GSVIVG01027528001 Vitis vinifera HOM05D007580 ORTHO05D009620 1.9e-26 123.2 148 51.4
Oeu024417.1 Olea europaea HOM05D007580 ORTHO05D009620 3.2e-26 122.5 185 47.0
CARHR000490 Cardamine hirsuta HOM05D007580 ORTHO05D009620 5.4e-26 121.7 153 52.3
Actinidia33444 Actinidia chinensis HOM05D007580 ORTHO05D009620 7.0e-26 121.3 151 49.0
CiPaw.01G052900 Carya illinoinensis HOM05D007580 ORTHO05D009620 7.0e-26 121.3 156 54.5
Nn1g01349 Nelumbo nucifera HOM05D007580 ORTHO05D009620 2.7e-25 119.4 159 45.3
TAR375G0300 Trochodendron aralioides HOM05D007580 ORTHO05D009620 1.0e-24 117.5 158 49.4
Cpa.g.sc18.198 Carica papaya HOM05D007580 ORTHO05D009620 1.7e-24 116.7 145 55.2
CSS0034624 Camellia sinensis var. sinensis HOM05D007580 ORTHO05D009620 1.1e-23 114.0 158 48.1
Thhalv10009990m.g Eutrema salsugineum HOM05D007580 ORTHO05D009620 2.5e-23 112.8 152 50.7
Ca_07865_v3 Cicer arietinum L. HOM05D007580 ORTHO05D009620 3.3e-23 112.5 157 48.4
DCAR_006906 Daucus carota HOM05D007580 ORTHO05D009620 3.3e-23 112.5 155 48.4
Aa31LG1G11200 Aethionema arabicum HOM05D007580 ORTHO05D009620 2.1e-22 109.8 153 51.0
BraA10t42299Z Brassica rapa HOM05D007580 ORTHO05D009620 8.0e-22 107.8 157 46.5
BolC5t28812H Brassica oleracea HOM05D007580 ORTHO05D009620 1.1e-21 107.5 158 46.2
A10p00190 Brassica napus HOM05D007580 ORTHO05D009620 3.1e-21 105.9 157 45.9
BcaB03g13622 Brassica carinata HOM05D007580 ORTHO05D009620 5.2e-21 105.1 157 45.9
PSO782G0900 Papaver somniferum HOM05D007580 ORTHO05D009620 8.9e-21 104.4 180 40.6
Phvul.008G070400 Phaseolus vulgaris HOM05D007580 ORTHO05D009620 8.9e-21 104.4 144 50.7
PSO478G4117 Papaver somniferum HOM05D007580 ORTHO05D009620 1.2e-20 104.0 195 39.5
PSO782G1514 Papaver somniferum HOM05D007580 ORTHO05D009620 1.2e-20 104.0 181 40.3
Carub.0001s0037 Capsella rubella HOM05D007580 ORTHO05D009620 2.6e-20 102.8 158 46.8
Nitab4.5_0004550g0100 Nicotiana tabacum HOM05D007580 ORTHO05D009620 2.6e-20 102.8 176 42.0
Sp1g00440 Schrenkiella parvula HOM05D007580 ORTHO05D009620 5.8e-20 101.7 156 45.5
Sc23g0003300 Simmondsia chinensis HOM05D007580 ORTHO05D009620 7.5e-20 101.3 165 46.1
AT1G01840 Arabidopsis thaliana HOM05D007580 ORTHO05D009620 1.7e-19 100.1 162 48.1
Rhsim01G0155700 Rhododendron simsii HOM05D007580 ORTHO05D009620 2.9e-19 99.4 167 43.7
AL1G10480 Arabidopsis lyrata HOM05D007580 ORTHO05D009620 3.7e-19 99.0 159 49.1
THA.LOC104814091 Tarenaya hassleriana HOM05D007580 ORTHO05D009620 8.3e-19 97.8 147 42.9
PGR031G3829 Punica granatum HOM05D007580 ORTHO05D009620 2.4e-18 96.3 176 40.3
MBI12_g45243_MAGBIO Magnolia biondii HOM05D007580 ORTHO05D009620 3.2e-18 95.9 163 44.2
Lsat_1_v5_gn_7_8361 Lactuca sativa HOM05D007580 ORTHO05D009620 9.2e-18 94.4 163 42.9
C05p00230 Brassica napus HOM05D007580 ORTHO05D009620 4.6e-17 92.0 159 42.1
MBI12_g06406_MAGBIO Magnolia biondii HOM05D007580 ORTHO05D009620 4.6e-17 92.0 163 43.6
ECA236G4638 Erigeron canadensis HOM05D007580 ORTHO05D009620 2.3e-16 89.7 153 39.9
HanXRQChr04g0121781 Helianthus annuus HOM05D007580 ORTHO05D009620 3.9e-16 89.0 147 38.1
Nitab4.5_0010430g0050 Nicotiana tabacum HOM05D007580 ORTHO05D009620 3.9e-16 89.0 178 39.3
Lj1g0023268 Lotus japonicus HOM05D007580 ORTHO05D009620 3.3e-15 85.9 155 45.2
Glyma.09G264200 Glycine max HOM05D007580 ORTHO05D009620 1.2e-14 84.0 102 53.9
Lsat_1_v5_gn_7_8421 Lactuca sativa HOM05D007580 ORTHO05D009620 1.2e-14 84.0 153 40.5
Peaxi162Scf00021g00055 Petunia axillaris HOM05D007580 ORTHO05D009620 2.1e-14 83.2 169 36.1
SGA_v2.0_scaffold95G28871 Striga asiatica HOM05D007580 ORTHO05D009620 6.2e-14 81.6 175 37.7
Ah.05g176020 Amaranthus hybridus HOM05D007580 ORTHO05D009620 1.2e-12 77.4 155 41.9
SalBow3G0911 Salvia bowleyana HOM05D007580 ORTHO05D009620 5.8e-12 75.1 178 35.4
Dinv32421 Davidia involucrata HOM05D007580 ORTHO05D009620 6.0e-09 65.1 56 60.7
vmacro20972 Vaccinium macrocarpon HOM05D007580 ORTHO05D009620 3.9e-08 62.4 103 44.7


User provided reference genes

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