Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G1543 Fragaria x ananassa HOM05D007974 ORTHO05D010062 3.8e-99 364.8 176 100.0
FAN03G0127 Fragaria x ananassa HOM05D007974 ORTHO05D010062 9.4e-98 360.1 176 98.9
FAN06G2079 Fragaria x ananassa HOM05D007974 ORTHO05D010062 2.7e-68 262.3 136 91.2
FAN10G0057 Fragaria x ananassa HOM05D007974 ORTHO05D010062 1.3e-67 260.0 136 91.2
FvH4_7g29100 Fragaria vesca HOM05D007974 ORTHO05D010062 2.9e-59 232.3 119 92.4
RcHm_v2.0_Chr1g0376841 Rosa chinensis HOM05D007974 ORTHO05D010062 1.2e-44 183.7 119 75.6
Prupe.2G291200 Prunus persica HOM05D007974 ORTHO05D010062 7.1e-37 157.9 119 64.7
MD01G1197800 Malus domestica HOM05D007974 ORTHO05D010062 3.5e-36 155.6 120 65.0
Dinv28469 Davidia involucrata HOM05D007974 ORTHO05D010062 4.6e-28 128.6 110 54.5
QL09p014742 Quercus lobata HOM05D007974 ORTHO05D010062 7.8e-28 127.9 108 55.6
Atru.chr1.506 Acer truncatum HOM05D007974 ORTHO05D010062 3.9e-27 125.6 111 54.1
CSS0036952 Camellia sinensis var. sinensis HOM05D007974 ORTHO05D010062 8.7e-27 124.4 108 52.8
Duzib068G0871 Durio zibethinus HOM05D007974 ORTHO05D010062 1.5e-26 123.6 122 49.2
Thecc.03G172000 Theobroma cacao HOM05D007974 ORTHO05D010062 3.3e-26 122.5 118 50.0
GSVIVG01010603001 Vitis vinifera HOM05D007974 ORTHO05D010062 5.6e-26 121.7 92 57.6
Potri.012G139700 Populus trichocarpa HOM05D007974 ORTHO05D010062 2.8e-25 119.4 119 51.3
Hma1.2p1_0270F.1_g108330 Hydrangea macrophylla HOM05D007974 ORTHO05D010062 4.7e-25 118.6 119 50.4
DCAR_018180 Daucus carota HOM05D007974 ORTHO05D010062 6.2e-25 118.2 112 47.3
Rhsim03G0178300 Rhododendron simsii HOM05D007974 ORTHO05D010062 6.2e-25 118.2 119 47.1
Migut.F01135 Erythranthe guttata HOM05D007974 ORTHO05D010062 8.1e-25 117.9 111 49.5
Aqoxy5G03970 Aquilegia oxysepala HOM05D007974 ORTHO05D010062 1.8e-24 116.7 113 50.4
CiPaw.04G066500 Carya illinoinensis HOM05D007974 ORTHO05D010062 2.4e-24 116.3 108 51.9
Lsat_1_v5_gn_8_6981 Lactuca sativa HOM05D007974 ORTHO05D010062 9.0e-24 114.4 120 50.8
Manes.06G145100 Manihot esculenta HOM05D007974 ORTHO05D010062 9.0e-24 114.4 117 47.9
Oeu022576.1 Olea europaea HOM05D007974 ORTHO05D010062 1.5e-23 113.6 88 59.1
Cfa008290 Carpinus fangiana HOM05D007974 ORTHO05D010062 2.0e-23 113.2 119 48.7
LjContig00238g0026064 Lotus japonicus HOM05D007974 ORTHO05D010062 2.0e-23 113.2 111 45.9
MBI12_g15161_MAGBIO Magnolia biondii HOM05D007974 ORTHO05D010062 2.0e-23 113.2 120 49.2
Nn6g34222 Nelumbo nucifera HOM05D007974 ORTHO05D010062 2.0e-23 113.2 105 48.6
PGSC0003DMG400014320 Solanum tuberosum HOM05D007974 ORTHO05D010062 2.6e-23 112.8 93 55.9
Glyma.20G156300 Glycine max HOM05D007974 ORTHO05D010062 3.4e-23 112.5 119 50.4
EL10Ac3g05720 Beta vulgaris HOM05D007974 ORTHO05D010062 4.4e-23 112.1 109 49.5
HanXRQChr13g0393691 Helianthus annuus HOM05D007974 ORTHO05D010062 4.4e-23 112.1 108 48.1
Actinidia34090 Actinidia chinensis HOM05D007974 ORTHO05D010062 5.8e-23 111.7 113 50.4
Sopen03g004930 Solanum pennellii HOM05D007974 ORTHO05D010062 9.9e-23 110.9 108 50.0
CiPaw.03G103600 Carya illinoinensis HOM05D007974 ORTHO05D010062 2.2e-22 109.8 104 49.0
Phvul.007G067200 Phaseolus vulgaris HOM05D007974 ORTHO05D010062 2.2e-22 109.8 108 49.1
ECA233G5549 Erigeron canadensis HOM05D007974 ORTHO05D010062 2.9e-22 109.4 116 50.0
Solyc03g026090.4 Solanum lycopersicum HOM05D007974 ORTHO05D010062 2.9e-22 109.4 108 49.1
CAN.G769.6 Capsicum annuum HOM05D007974 ORTHO05D010062 3.8e-22 109.0 108 50.0
Nitab4.5_0004843g0030 Nicotiana tabacum HOM05D007974 ORTHO05D010062 3.8e-22 109.0 89 55.1
COL.COLO4_14276 Corchorus olitorius HOM05D000659 ORTHO05D000505 4.9e-22 108.6 115 47.8
Ciclev10006787m.g Citrus clementina HOM05D007974 ORTHO05D010062 6.4e-22 108.2 89 53.9
Actinidia32884 Actinidia chinensis HOM05D007974 ORTHO05D010062 8.4e-22 107.8 109 49.5
Nitab4.5_0002107g0020 Nicotiana tabacum HOM05D007974 ORTHO05D010062 1.1e-21 107.5 107 47.7
Eucgr.K00232 Eucalyptus grandis HOM05D007974 ORTHO05D010062 1.9e-21 106.7 108 47.2
Eucgr.L02686 Eucalyptus grandis HOM05D007974 ORTHO05D010062 1.9e-21 106.7 108 47.2
Sabra12G0104700 Salix brachista HOM05D000659 ORTHO05D000505 1.9e-21 106.7 95 50.5
Glyma.10G238250 Glycine max HOM05D007974 ORTHO05D010062 3.2e-21 105.9 90 53.3
arahy.Tifrunner.gnm1.ann1.G5CYYB Arachis hypogaea HOM05D007974 ORTHO05D010062 5.4e-21 105.1 118 47.5
VMungo0720G1552 Vigna mungo HOM05D007974 ORTHO05D010062 5.4e-21 105.1 108 48.1
Cpa.g.sc107.23 Carica papaya HOM05D007974 ORTHO05D010062 7.1e-21 104.8 121 45.5
ATR0757G011 Amborella trichopoda HOM05D007974 ORTHO05D010062 1.2e-20 104.0 108 47.2
MSTRG.8445 Avicennia marina HOM05D007974 ORTHO05D010062 1.2e-20 104.0 89 53.9
Sc19g0000020 Simmondsia chinensis HOM05D007974 ORTHO05D010062 4.6e-20 102.1 97 50.5
Aa31LG11G1470 Aethionema arabicum HOM05D007974 ORTHO05D010062 1.3e-19 100.5 113 45.1
Sc19g0001640 Simmondsia chinensis HOM05D007974 ORTHO05D010062 2.3e-19 99.8 110 46.4
TPR.G17393 Trifolium pratense HOM05D007974 ORTHO05D010062 3.0e-19 99.4 116 44.8
AL8G38840 Arabidopsis lyrata HOM05D007974 ORTHO05D010062 2.5e-18 96.3 106 41.5
Thhalv10005335m.g Eutrema salsugineum HOM05D007974 ORTHO05D010062 2.5e-18 96.3 107 41.1
AT5G62065 Arabidopsis thaliana HOM05D007974 ORTHO05D010062 5.6e-18 95.1 109 40.4
BcaB02g09619 Brassica carinata HOM05D007974 ORTHO05D010062 7.3e-18 94.7 113 42.5
Gorai.008G279400 Gossypium raimondii HOM05D007974 ORTHO05D010062 7.3e-18 94.7 120 43.3
THA.LOC104820164 Tarenaya hassleriana HOM05D007974 ORTHO05D010062 9.6e-18 94.4 112 36.6
PGR142G2606 Punica granatum HOM05D007974 ORTHO05D010062 1.3e-17 94.0 93 48.4
Gohir.D12G260800 Gossypium hirsutum HOM05D007974 ORTHO05D010062 2.1e-17 93.2 118 43.2
CARHR275850 Cardamine hirsuta HOM05D007974 ORTHO05D010062 3.6e-17 92.4 108 43.5
Medtr1g101320 Medicago truncatula HOM05D007974 ORTHO05D010062 3.6e-17 92.4 109 41.3
Carub.0008s2274 Capsella rubella HOM05D007974 ORTHO05D010062 4.8e-17 92.0 109 41.3
Gohir.A12G260000 Gossypium hirsutum HOM05D007974 ORTHO05D010062 1.4e-16 90.5 118 42.4
Sp2g25230 Schrenkiella parvula HOM05D007974 ORTHO05D010062 1.8e-16 90.1 91 45.1
BraA06t25817Z Brassica rapa HOM05D007974 ORTHO05D010062 3.1e-16 89.4 107 39.3
A06p28760 Brassica napus HOM05D007974 ORTHO05D010062 4.0e-16 89.0 116 40.5
C03p64890 Brassica napus HOM05D007974 ORTHO05D010062 5.3e-16 88.6 117 37.6
BolC3t18751H Brassica oleracea HOM05D007974 ORTHO05D010062 5.3e-16 88.6 117 37.6
Potri.015G142100 Populus trichocarpa HOM05D007974 ORTHO05D010062 6.7e-11 71.6 86 45.3
Gohir.D11G325151 Gossypium hirsutum HOM05D007974 ORTHO05D010062 1.9e-10 70.1 77 45.5
Actinidia03112 Actinidia chinensis HOM05D007974 ORTHO05D010062 3.3e-10 69.3 116 37.1
Lsat_1_v5_gn_2_131621 Lactuca sativa HOM05D007974 ORTHO05D010062 1.6e-09 67.0 93 41.9
Medtr7g072993 Medicago truncatula HOM05D000275 ORTHO05D000181 5.3e-08 62.0 113 31.9
Rhsim07G0048700 Rhododendron simsii HOM05D000275 ORTHO05D000181 3.8e-06 55.8 132 25.0
Aa31LG5G22770 Aethionema arabicum HOM05D000275 ORTHO05D003378 6.4e-06 55.1 108 32.4


User provided reference genes

Program Settings