Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G1502 Fragaria x ananassa HOM05D005469 ORTHO05D001701 1.3e-69 266.2 125 100.0
FvH4_7g24910 Fragaria vesca HOM05D005469 ORTHO05D001701 1.3e-56 223.0 107 98.1
FAN01G2198 Fragaria x ananassa HOM05D005469 ORTHO05D001701 1.3e-56 223.0 107 98.1
RcHm_v2.0_Chr1g0370791 Rosa chinensis HOM05D005469 ORTHO05D001701 3.8e-53 211.5 107 93.5
FAN10G0251 Fragaria x ananassa HOM05D005469 ORTHO05D001701 1.6e-51 206.1 99 98.0
RcHm_v2.0_Chr1g0370801 Rosa chinensis HOM05D005469 ORTHO05D001701 3.0e-50 201.8 107 88.8
QL08p063579 Quercus lobata HOM05D005469 ORTHO05D001701 4.1e-31 138.3 107 61.7
SGA_v2.0_scaffold44G16665 Striga asiatica HOM05D005469 ORTHO05D001701 3.5e-30 135.2 106 60.4
FvH4_7g24940 Fragaria vesca HOM05D005469 ORTHO05D001701 1.3e-29 133.3 107 58.9
FAN06G3559 Fragaria x ananassa HOM05D005469 ORTHO05D001701 1.3e-29 133.3 107 58.9
CSS0028429 Camellia sinensis var. sinensis HOM05D005469 ORTHO05D001701 2.3e-29 132.5 106 59.4
Duzib114G0491 Durio zibethinus HOM05D005469 ORTHO05D001701 2.3e-29 132.5 108 58.3
FAN10G1213 Fragaria x ananassa HOM05D005469 ORTHO05D001701 2.3e-29 132.5 107 58.9
Nitab4.5_0000058g0190 Nicotiana tabacum HOM05D005469 ORTHO05D001701 2.3e-29 132.5 102 61.8
GSVIVG01032773001 Vitis vinifera HOM05D005469 ORTHO05D001701 5.0e-29 131.3 106 59.4
Thecc.10G012300 Theobroma cacao HOM05D005469 ORTHO05D001701 6.6e-29 131.0 108 55.6
Nitab4.5_0000666g0120 Nicotiana tabacum HOM05D005469 ORTHO05D001701 8.6e-29 130.6 102 59.8
CiPaw.02G194900 Carya illinoinensis HOM05D005469 ORTHO05D001701 1.9e-28 129.4 106 59.4
Duzib128G1408 Durio zibethinus HOM05D005469 ORTHO05D001701 1.9e-28 129.4 108 57.4
MD07G1225500 Malus domestica HOM05D005469 ORTHO05D001701 1.9e-28 129.4 106 61.3
TWI73G0354 Tripterygium wilfordii HOM05D005469 ORTHO05D001701 1.9e-28 129.4 107 55.1
SalBow3G1256 Salvia bowleyana HOM05D005469 ORTHO05D001701 4.3e-28 128.3 101 61.4
RcHm_v2.0_Chr1g0370811 Rosa chinensis HOM05D005469 ORTHO05D001701 7.3e-28 127.5 107 56.1
Ciclev10033597m.g Citrus clementina HOM05D005469 ORTHO05D001701 9.5e-28 127.1 108 59.3
COL.COLO4_15412 Corchorus olitorius HOM05D005469 ORTHO05D001701 9.5e-28 127.1 108 57.4
TAR623G0989 Trochodendron aralioides HOM05D005469 ORTHO05D001701 9.5e-28 127.1 108 55.6
Cfa001288 Carpinus fangiana HOM05D005469 ORTHO05D001701 1.2e-27 126.7 105 59.0
Haze_17260 Corylus avellana HOM05D005469 ORTHO05D001701 1.2e-27 126.7 108 59.3
Cfa001290 Carpinus fangiana HOM05D005469 ORTHO05D001701 1.6e-27 126.3 108 59.3
Gohir.D10G250700 Gossypium hirsutum HOM05D005469 ORTHO05D001701 1.6e-27 126.3 107 55.1
Gorai.011G291100 Gossypium raimondii HOM05D005469 ORTHO05D001701 1.6e-27 126.3 107 55.1
Lj1C959T17 Lonicera japonica HOM05D005469 ORTHO05D001701 1.6e-27 126.3 103 58.3
Manes.07G132700 Manihot esculenta HOM05D005469 ORTHO05D001701 1.6e-27 126.3 106 57.5
PGSC0003DMG400030033 Solanum tuberosum HOM05D005469 ORTHO05D001701 2.1e-27 125.9 108 55.6
TAR633G0722 Trochodendron aralioides HOM05D005469 ORTHO05D001701 2.1e-27 125.9 108 55.6
Haze_17261 Corylus avellana HOM05D005469 ORTHO05D001701 2.8e-27 125.6 102 58.8
Dinv21761 Davidia involucrata HOM05D005469 ORTHO05D001701 2.8e-27 125.6 105 57.1
Cc02_g06130 Coffea canephora HOM05D005469 ORTHO05D001701 6.1e-27 124.4 101 59.4
MD01G1156800 Malus domestica HOM05D005469 ORTHO05D001701 6.1e-27 124.4 106 57.5
Atru.chr12.80 Acer truncatum HOM05D005469 ORTHO05D001701 8.0e-27 124.0 108 54.6
Sopen06g016860 Solanum pennellii HOM05D005469 ORTHO05D001701 1.0e-26 123.6 102 55.9
Nitab4.5_0000789g0080 Nicotiana tabacum HOM05D005469 ORTHO05D001701 1.4e-26 123.2 102 55.9
Peaxi162Scf00045g02525 Petunia axillaris HOM05D000087 ORTHO05D000793 1.4e-26 123.2 102 55.9
CANSAT56G3078 Cannabis sativa HOM05D005469 ORTHO05D001701 1.8e-26 122.9 108 59.3
Duzib106G0906 Durio zibethinus HOM05D005469 ORTHO05D001701 2.3e-26 122.5 109 57.8
MBI15_g40303_MAGBIO Magnolia biondii HOM05D005469 ORTHO05D001701 3.0e-26 122.1 106 55.7
Aa31LG11G6570 Aethionema arabicum HOM05D005469 ORTHO05D001701 4.0e-26 121.7 104 54.8
Manes.10G009700 Manihot esculenta HOM05D005469 ORTHO05D001701 4.0e-26 121.7 106 55.7
Eucgr.G03079 Eucalyptus grandis HOM05D005469 ORTHO05D001701 5.2e-26 121.3 107 56.1
BcaC06g32261 Brassica carinata HOM05D005469 ORTHO05D001701 6.8e-26 120.9 105 55.2
A10p30770 Brassica napus HOM05D005469 ORTHO05D001701 8.9e-26 120.6 105 55.2
BraA10t45118Z Brassica rapa HOM05D005469 ORTHO05D001701 8.9e-26 120.6 105 55.2
CANSAT56G4151 Cannabis sativa HOM05D005469 ORTHO05D001701 8.9e-26 120.6 108 58.3
DCAR_024812 Daucus carota HOM05D005469 ORTHO05D001701 8.9e-26 120.6 103 55.3
Hma1.2p1_3227F.1_g334240 Hydrangea macrophylla HOM05D005469 ORTHO05D001701 8.9e-26 120.6 106 53.8
BraA02t04851Z Brassica rapa HOM05D005469 ORTHO05D001701 1.2e-25 120.2 105 55.2
THA.LOC104816535 Tarenaya hassleriana HOM05D005469 ORTHO05D001701 1.2e-25 120.2 102 54.9
EL10Ac2g04878 Beta vulgaris HOM05D005469 ORTHO05D001701 1.5e-25 119.8 101 53.5
CsaV3_5G010340 Cucumis sativus L. HOM05D005469 ORTHO05D001701 1.5e-25 119.8 101 58.4
Lj8C63T7 Lonicera japonica HOM05D005469 ORTHO05D001701 1.5e-25 119.8 102 57.8
PSO349G0001 Papaver somniferum HOM05D005469 ORTHO05D001701 1.5e-25 119.8 101 56.4
BolC2t06202H Brassica oleracea HOM05D005469 ORTHO05D001701 2.0e-25 119.4 105 55.2
CAN.G1268.13 Capsicum annuum HOM05D005469 ORTHO05D001701 2.0e-25 119.4 102 53.9
Glyma.18G025200 Glycine max HOM05D005469 ORTHO05D001701 2.0e-25 119.4 106 55.7
HanXRQChr14g0459401 Helianthus annuus HOM05D005469 ORTHO05D001701 2.0e-25 119.4 107 54.2
Solyc05g052500.4 Solanum lycopersicum HOM05D000087 ORTHO05D000793 2.0e-25 119.4 102 54.9
THA.LOC104826842 Tarenaya hassleriana HOM05D005469 ORTHO05D001701 2.0e-25 119.4 102 54.9
BcaC06g32262 Brassica carinata HOM05D005469 ORTHO05D001701 2.6e-25 119.0 105 55.2
CARHR207770 Cardamine hirsuta HOM05D005469 ORTHO05D001701 2.6e-25 119.0 104 55.8
MELO3C018370.2 Cucumis melo HOM05D005469 ORTHO05D001701 2.6e-25 119.0 101 58.4
Thhalv10014798m.g Eutrema salsugineum HOM05D005469 ORTHO05D001701 2.6e-25 119.0 104 55.8
AL6G15390 Arabidopsis lyrata HOM05D005469 ORTHO05D001701 3.4e-25 118.6 104 54.8
CAN.G19.12 Capsicum annuum HOM05D005469 ORTHO05D001701 3.4e-25 118.6 101 54.5
ClCG07G004420 Citrullus lanatus HOM05D005469 ORTHO05D001701 3.4e-25 118.6 101 57.4
AT5G05500 Arabidopsis thaliana HOM05D005469 ORTHO05D001701 4.4e-25 118.2 104 54.8
Carub.0006s0440 Capsella rubella HOM05D005469 ORTHO05D001701 4.4e-25 118.2 104 54.8
PSO017G6429 Papaver somniferum HOM05D005469 ORTHO05D001701 4.4e-25 118.2 101 55.4
Sabra10G0142600 Salix brachista HOM05D005469 ORTHO05D001701 4.4e-25 118.2 106 55.7
HanXRQChr07g0203111 Helianthus annuus HOM05D005469 ORTHO05D001701 5.8e-25 117.9 107 53.3
Nitab4.5_0003391g0070 Nicotiana tabacum HOM05D000087 ORTHO05D000793 5.8e-25 117.9 102 53.9
Sopen05g031040 Solanum pennellii HOM05D005469 ORTHO05D001701 5.8e-25 117.9 102 53.9
PGSC0003DMG400027122 Solanum tuberosum HOM05D005469 ORTHO05D001701 5.8e-25 117.9 102 53.9
C02p02370 Brassica napus HOM05D005469 ORTHO05D001701 7.5e-25 117.5 105 55.2
C09p71260 Brassica napus HOM05D005469 ORTHO05D001701 7.5e-25 117.5 105 54.3
BolC9t59887H Brassica oleracea HOM05D005469 ORTHO05D001701 7.5e-25 117.5 105 54.3
Glyma.11G232100 Glycine max HOM05D005469 ORTHO05D001701 7.5e-25 117.5 106 54.7
Potri.008G072000 Populus trichocarpa HOM05D005469 ORTHO05D001701 7.5e-25 117.5 106 56.6
Sp6g37350 Schrenkiella parvula HOM05D005469 ORTHO05D001701 7.5e-25 117.5 104 53.8
Lj6g0021216 Lotus japonicus HOM05D005469 ORTHO05D001701 9.8e-25 117.1 101 57.4
Ca_15147_v3 Cicer arietinum L. HOM05D005469 ORTHO05D001701 1.7e-24 116.3 104 55.8
Phvul.001G245200 Phaseolus vulgaris HOM05D005469 ORTHO05D001701 2.2e-24 115.9 104 55.8
Ah.10g036310 Amaranthus hybridus HOM05D005469 ORTHO05D001701 2.9e-24 115.5 101 51.5
Aqoxy1G01324 Aquilegia oxysepala HOM05D005469 ORTHO05D001701 2.9e-24 115.5 102 54.9
AUR62012286 Chenopodium quinoa HOM05D005469 ORTHO05D001701 2.9e-24 115.5 104 53.8
COL.COLO4_25530 Corchorus olitorius HOM05D005469 ORTHO05D001701 2.9e-24 115.5 101 53.5
Migut.F00654 Erythranthe guttata HOM05D005469 ORTHO05D001701 2.9e-24 115.5 101 55.4
LjContig00357g0002708 Lotus japonicus HOM05D005469 ORTHO05D001701 4.9e-24 114.8 107 51.4
Potri.010G185400 Populus trichocarpa HOM05D005469 ORTHO05D001701 4.9e-24 114.8 106 53.8
PGR142G1835 Punica granatum HOM05D005469 ORTHO05D001701 4.9e-24 114.8 102 53.9
AUR62022927 Chenopodium quinoa HOM05D005469 ORTHO05D001701 6.4e-24 114.4 104 54.8
ECA238G1751 Erigeron canadensis HOM05D005469 ORTHO05D001701 6.4e-24 114.4 101 53.5
VMungo1383G2982 Vigna mungo HOM05D005469 ORTHO05D001701 6.4e-24 114.4 104 55.8
ECA238G2582 Erigeron canadensis HOM05D005469 ORTHO05D001701 1.1e-23 113.6 101 52.5
BcaB05g21713 Brassica carinata HOM05D005469 ORTHO05D001701 1.4e-23 113.2 104 52.9
Lalb_Chr08g0231561 Lupinus albus HOM05D005469 ORTHO05D001701 1.9e-23 112.8 104 52.9
PSO339G0551 Papaver somniferum HOM05D005469 ORTHO05D001701 2.4e-23 112.5 104 51.9
Lalb_Chr11g0075051 Lupinus albus HOM05D005469 ORTHO05D001701 3.2e-23 112.1 104 51.9
Lsat_1_v5_gn_2_124321 Lactuca sativa HOM05D005469 ORTHO05D001701 5.4e-23 111.3 101 54.5
Sc10g0002540 Simmondsia chinensis HOM05D005469 ORTHO05D001701 7.0e-23 110.9 101 53.5
Lsat_1_v5_gn_2_124301 Lactuca sativa HOM05D005469 ORTHO05D001701 9.2e-23 110.5 101 52.5
Sed0020461 Sechium edule HOM05D005469 ORTHO05D001701 9.2e-23 110.5 101 54.5
Medtr3g071470 Medicago truncatula HOM05D005469 ORTHO05D001701 1.6e-22 109.8 104 53.8
Psat5g130360 Pisum sativum HOM05D005469 ORTHO05D001701 2.7e-22 109.0 103 50.5
BcaB05g21714 Brassica carinata HOM05D005469 ORTHO05D001701 3.5e-22 108.6 96 55.2
TPR.G30151 Trifolium pratense HOM05D005469 ORTHO05D001701 4.6e-22 108.2 104 52.9
PSO801G0522 Papaver somniferum HOM05D005469 ORTHO05D001701 1.0e-21 107.1 104 50.0
arahy.Tifrunner.gnm1.ann1.JSQZ9G Arachis hypogaea HOM05D005469 ORTHO05D001701 1.7e-21 106.3 99 56.6
MBI03_g43893_MAGBIO Magnolia biondii HOM05D005469 ORTHO05D001701 1.7e-21 106.3 108 48.1
Sabra08G0053200 Salix brachista HOM05D005469 ORTHO05D001701 3.0e-21 105.5 106 52.8
arahy.Tifrunner.gnm1.ann1.NV82FA Arachis hypogaea HOM05D005469 ORTHO05D001701 7.3e-20 100.9 94 57.4
Prupe.2G254300 Prunus persica HOM05D005469 ORTHO05D001701 9.5e-20 100.5 83 62.7
FAN01G2364 Fragaria x ananassa HOM05D005469 ORTHO05D001701 1.1e-18 97.1 76 60.5
DCAR_011836 Daucus carota HOM05D005469 ORTHO05D001701 2.6e-17 92.4 105 47.6
Gohir.A10G238851 Gossypium hirsutum HOM05D005469 ORTHO05D001701 8.3e-16 87.4 71 56.3
HPP92_018099 Vanilla planifolia HOM05D005469 ORTHO05D001701 5.4e-15 84.7 102 37.3
Os01g0164300 Oryza sativa ssp. japonica HOM05D005469 ORTHO05D001701 2.7e-14 82.4 105 41.0
MBI03_g21448_MAGBIO Magnolia biondii HOM05D005469 ORTHO05D001701 3.5e-14 82.0 107 41.1
Zm00001eb123470 Zea mays HOM05D005469 ORTHO05D001701 2.3e-13 79.3 112 42.0
MBI03_g21447_MAGBIO Magnolia biondii HOM05D005469 ORTHO05D001701 3.0e-13 79.0 84 46.4
Medtr5g014340 Medicago truncatula HOM05D005469 ORTHO05D001701 8.6e-13 77.4 84 46.4
ATR0174G015 Amborella trichopoda HOM05D005469 ORTHO05D001701 3.3e-12 75.5 107 39.3
Os01g0164075 Oryza sativa ssp. japonica HOM05D005469 ORTHO05D001701 3.3e-12 75.5 103 42.7
Cpa.g.sc19.144 Carica papaya HOM05D005469 ORTHO05D001701 1.2e-11 73.6 63 57.1
Gohir.A05G161100 Gossypium hirsutum HOM05D003009 ORTHO05D001701 2.2e-08 62.8 82 42.7
Gohir.D05G163801 Gossypium hirsutum HOM05D003009 ORTHO05D001701 2.2e-08 62.8 82 42.7
Gorai.009G168900 Gossypium raimondii HOM05D003009 ORTHO05D001701 2.2e-08 62.8 82 42.7
Sed0003622 Sechium edule HOM05D005469 ORTHO05D001701 1.4e-07 60.1 83 38.6
COL.COLO4_31456 Corchorus olitorius HOM05D003009 ORTHO05D001701 3.2e-07 58.9 102 35.3
QL05p041024 Quercus lobata HOM05D003009 ORTHO05D001701 3.2e-07 58.9 88 40.9
PSO210G4623 Papaver somniferum HOM05D003009 ORTHO05D001701 7.1e-07 57.8 91 38.5
QL05p041061 Quercus lobata HOM05D003009 ORTHO05D001701 7.1e-07 57.8 88 37.5
CiPaw.09G060900 Carya illinoinensis HOM05D003009 ORTHO05D001701 1.2e-06 57.0 104 32.7
Gohir.A06G128400 Gossypium hirsutum HOM05D003009 ORTHO05D001701 1.2e-06 57.0 97 34.0
Gohir.D06G132500 Gossypium hirsutum HOM05D003009 ORTHO05D001701 1.2e-06 57.0 97 34.0
Gorai.010G154300 Gossypium raimondii HOM05D003009 ORTHO05D001701 1.2e-06 57.0 97 34.0
PSO832G2944 Papaver somniferum HOM05D003009 ORTHO05D001701 1.2e-06 57.0 91 38.5
ATR0737G038 Amborella trichopoda HOM05D003009 ORTHO05D001701 2.7e-06 55.8 90 32.2
Thecc.06G185700 Theobroma cacao HOM05D003009 ORTHO05D001701 2.7e-06 55.8 102 34.3
COL.COLO4_03830 Corchorus olitorius HOM05D005469 ORTHO05D001701 4.6e-06 55.1 56 53.6
GSVIVG01007286001 Vitis vinifera HOM05D003009 ORTHO05D001701 4.6e-06 55.1 88 36.4
Atru.chr12.360 Acer truncatum HOM05D002284 ORTHO05D002427 6.0e-06 54.7 80 41.2
Atru.chr12.377 Acer truncatum HOM05D002284 ORTHO05D002427 6.0e-06 54.7 80 41.2
CSS0015149 Camellia sinensis var. sinensis HOM05D005469 ORTHO05D001701 7.8e-06 54.3 46 52.2


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