Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G1428 Fragaria x ananassa HOM05D000279 ORTHO05D000498 2.2e-44 181.8 85 100.0
FvH4_7g04571 Fragaria vesca HOM05D000279 ORTHO05D000498 2.1e-34 148.7 80 88.8
RcHm_v2.0_Chr1g0330011 Rosa chinensis HOM05D000279 ORTHO05D000498 6.2e-23 110.5 78 70.5
RcHm_v2.0_Chr1g0330041 Rosa chinensis HOM05D000279 ORTHO05D000498 2.9e-20 101.7 81 64.2
AUR62020196 Chenopodium quinoa HOM05D000279 ORTHO05D000957 3.7e-07 58.2 67 41.8
Hund18816 Selenicereus undatus HOM05D000279 ORTHO05D000957 3.7e-07 58.2 67 40.3
Sc06g0008610 Simmondsia chinensis HOM05D000279 ORTHO05D000957 6.3e-07 57.4 67 38.8
AUR62001586 Chenopodium quinoa HOM05D000279 ORTHO05D000957 8.2e-07 57.0 67 41.8
GSVIVG01037528001 Vitis vinifera HOM05D000279 ORTHO05D000957 8.2e-07 57.0 70 41.4
ClCG10G017870 Citrullus lanatus HOM05D000279 ORTHO05D000957 1.8e-06 55.8 63 42.9
Ciclev10027709m.g Citrus clementina HOM05D000279 ORTHO05D000957 1.8e-06 55.8 71 43.7
CsaV3_3G038420 Cucumis sativus L. HOM05D000279 ORTHO05D000957 1.8e-06 55.8 63 42.9
Phvul.006G008480 Phaseolus vulgaris HOM05D000279 ORTHO05D000957 1.8e-06 55.8 67 38.8
PGR142G3302 Punica granatum HOM05D000279 ORTHO05D000957 1.8e-06 55.8 63 39.7
Cpa.g.sc103.36 Carica papaya HOM05D000279 ORTHO05D000957 2.4e-06 55.5 67 37.3
Gohir.A05G077000 Gossypium hirsutum HOM05D000279 ORTHO05D000957 2.4e-06 55.5 67 37.3
MD00G1065000 Malus domestica HOM05D000279 ORTHO05D000498 2.4e-06 55.5 57 42.1
MD02G1268300 Malus domestica HOM05D000279 ORTHO05D000498 2.4e-06 55.5 51 43.1
MD07G1051000 Malus domestica HOM05D000279 ORTHO05D000498 2.4e-06 55.5 57 42.1
RcHm_v2.0_Chr7g0228171 Rosa chinensis HOM05D000279 ORTHO05D000498 2.4e-06 55.5 66 42.4
A02p16050 Brassica napus HOM05D000385 ORTHO05D000269 3.1e-06 55.1 47 44.7
MD11G1177200 Malus domestica HOM05D000279 ORTHO05D000957 3.1e-06 55.1 67 34.3
RcHm_v2.0_Chr1g0330221 Rosa chinensis HOM05D000279 ORTHO05D000498 3.1e-06 55.1 50 44.0
TAR623G1679 Trochodendron aralioides HOM05D000279 ORTHO05D000957 3.1e-06 55.1 60 40.0
Duzib150G0607 Durio zibethinus HOM05D000279 ORTHO05D000957 4.1e-06 54.7 67 37.3
Gohir.A07G114416 Gossypium hirsutum HOM05D000279 ORTHO05D000957 4.1e-06 54.7 67 37.3
Gohir.D07G118100 Gossypium hirsutum HOM05D000279 ORTHO05D000957 4.1e-06 54.7 67 37.3
Gorai.001G127100 Gossypium raimondii HOM05D000279 ORTHO05D000957 4.1e-06 54.7 67 37.3
Gorai.009G081400 Gossypium raimondii HOM05D000279 ORTHO05D000957 4.1e-06 54.7 67 37.3
Duzib093G1862 Durio zibethinus HOM05D000279 ORTHO05D000957 5.3e-06 54.3 60 38.3
Gohir.A04G056242 Gossypium hirsutum HOM05D000279 ORTHO05D000957 5.3e-06 54.3 60 40.0
Prupe.2G052900 Prunus persica HOM05D000279 ORTHO05D000498 5.3e-06 54.3 52 42.3
QL01p018861 Quercus lobata HOM05D000279 ORTHO05D000957 5.3e-06 54.3 67 37.3
vmacro14303 Vaccinium macrocarpon HOM05D000279 ORTHO05D000957 5.3e-06 54.3 61 39.3
Manes.18G142251 Manihot esculenta HOM05D000385 ORTHO05D000269 6.9e-06 53.9 50 44.0
PSO339G5267 Papaver somniferum HOM05D000279 ORTHO05D000957 6.9e-06 53.9 62 40.3
PSO384G0693 Papaver somniferum HOM05D000279 ORTHO05D000957 6.9e-06 53.9 62 40.3
Sc22g0003010 Simmondsia chinensis HOM05D000279 ORTHO05D000957 6.9e-06 53.9 61 37.7
Thecc.05G182100 Theobroma cacao HOM05D000279 ORTHO05D000957 6.9e-06 53.9 60 40.0
Thecc.09G267500 Theobroma cacao HOM05D000279 ORTHO05D000957 6.9e-06 53.9 67 41.8
VMungo0540G0804 Vigna mungo HOM05D000279 ORTHO05D000957 6.9e-06 53.9 67 37.3
BraA02t06666Z Brassica rapa HOM05D000385 ORTHO05D000269 9.1e-06 53.5 47 44.7
Gohir.A10G195000 Gossypium hirsutum HOM05D000279 ORTHO05D000957 9.1e-06 53.5 63 39.7
Gohir.D10G202000 Gossypium hirsutum HOM05D000279 ORTHO05D000957 9.1e-06 53.5 63 39.7
Gorai.011G226800 Gossypium raimondii HOM05D000279 ORTHO05D000957 9.1e-06 53.5 63 39.7
MD16G1146800 Malus domestica HOM05D000385 ORTHO05D000269 9.1e-06 53.5 53 43.4
Manes.10G107001 Manihot esculenta HOM05D000385 ORTHO05D000269 9.1e-06 53.5 67 40.3
Nn6g33249 Nelumbo nucifera HOM05D000279 ORTHO05D000957 9.1e-06 53.5 60 40.0
Prupe.6G149500 Prunus persica HOM05D000279 ORTHO05D000957 9.1e-06 53.5 67 35.8


User provided reference genes

Program Settings