Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G1366 Fragaria x ananassa HOM05D017106 ORTHO05D013324 1.9e-111 406.0 221 100.0
FAN10G1683 Fragaria x ananassa HOM05D017106 ORTHO05D013324 5.5e-103 377.9 222 91.4
FvH4_7g02110 Fragaria vesca HOM05D017106 ORTHO05D013324 1.8e-101 372.9 222 90.5
FAN06G2366 Fragaria x ananassa HOM05D017106 ORTHO05D013324 1.5e-89 333.2 221 82.8
FvH4_7g01990 Fragaria vesca HOM05D017106 ORTHO05D013324 6.7e-61 238.0 223 65.9
FAN01G2258 Fragaria x ananassa HOM05D017106 ORTHO05D013324 2.0e-28 130.2 160 60.0
FAN10G3260 Fragaria x ananassa HOM05D017106 ORTHO05D013324 4.4e-28 129.0 220 43.2
FAN06G0835 Fragaria x ananassa HOM05D007065 ORTHO05D008960 2.8e-22 109.8 134 54.5
FvH4_7g04141 Fragaria vesca HOM05D017106 ORTHO05D013324 6.6e-16 88.6 208 37.5
FAN18G0925 Fragaria x ananassa HOM05D016120 ORTHO05D013324 1.3e-11 74.3 94 41.5
FvH4_5g27070 Fragaria vesca HOM05D016120 ORTHO05D013324 2.2e-11 73.6 94 41.5
FAN04G1442 Fragaria x ananassa HOM05D016120 ORTHO05D013324 2.2e-11 73.6 94 41.5
FAN08G0332 Fragaria x ananassa HOM05D016120 ORTHO05D013324 2.2e-11 73.6 94 41.5
FAN13G0405 Fragaria x ananassa HOM05D016120 ORTHO05D013324 6.4e-11 72.0 94 40.4
Prupe.7G032000 Prunus persica HOM05D000307 ORTHO05D000166 4.1e-10 69.3 92 40.2
FvH4_4g07700 Fragaria vesca HOM05D016120 ORTHO05D013324 5.4e-10 68.9 83 47.0
FAN22G2097 Fragaria x ananassa HOM05D016120 ORTHO05D013324 7.1e-10 68.6 94 41.5
FAN12G1561 Fragaria x ananassa HOM05D016120 ORTHO05D013324 2.1e-09 67.0 83 45.8
Prupe.7G030800 Prunus persica HOM05D000307 ORTHO05D000166 4.6e-09 65.9 211 28.9
MD15G1430800 Malus domestica HOM05D000307 ORTHO05D013324 1.0e-08 64.7 74 41.9
Prupe.7G031800 Prunus persica HOM05D000307 ORTHO05D000166 1.0e-08 64.7 214 27.6
MD17G1250500 Malus domestica HOM05D000307 ORTHO05D000166 1.3e-08 64.3 82 40.2
Prupe.7G030200 Prunus persica HOM05D000307 ORTHO05D000166 3.0e-08 63.2 157 29.3
MD02G1297800 Malus domestica HOM05D000307 ORTHO05D000166 6.6e-08 62.0 88 36.4
Psat1g082000 Pisum sativum HOM05D000307 ORTHO05D000166 1.9e-07 60.5 76 40.8
FvH4_2g27520 Fragaria vesca HOM05D000307 ORTHO05D000166 3.3e-07 59.7 73 39.7
FAN15G0593 Fragaria x ananassa HOM05D000307 ORTHO05D000166 3.3e-07 59.7 73 39.7
FAN24G2406 Fragaria x ananassa HOM05D000307 ORTHO05D000166 3.3e-07 59.7 73 39.7
FAN27G3405 Fragaria x ananassa HOM05D000307 ORTHO05D000166 4.3e-07 59.3 73 39.7
Psat6g001960 Pisum sativum HOM05D000307 ORTHO05D000166 4.3e-07 59.3 76 39.5
RcHm_v2.0_Chr6g0296351 Rosa chinensis HOM05D000307 ORTHO05D000166 5.6e-07 58.9 75 41.3
AT5G58890 Arabidopsis thaliana HOM05D000307 ORTHO05D000166 7.3e-07 58.5 68 38.2
Potri.002G255700 Populus trichocarpa HOM05D000307 ORTHO05D000166 7.3e-07 58.5 72 41.7
Glyma.08G095300 Glycine max HOM05D008089 ORTHO05D000166 9.6e-07 58.2 81 39.5
Potri.012G109900 Populus trichocarpa HOM05D000307 ORTHO05D000166 9.6e-07 58.2 72 41.7
Eucgr.F02794 Eucalyptus grandis HOM05D000307 ORTHO05D000166 1.2e-06 57.8 81 38.3
FAN20G0315 Fragaria x ananassa HOM05D000307 ORTHO05D000166 1.6e-06 57.4 73 38.4
Eucgr.H02504 Eucalyptus grandis HOM05D000307 ORTHO05D000166 2.1e-06 57.0 73 41.1
Eucgr.J02348 Eucalyptus grandis HOM05D000307 ORTHO05D000166 2.1e-06 57.0 81 33.3
Carub.0008s1953 Capsella rubella HOM05D000307 ORTHO05D000166 2.8e-06 56.6 69 40.6
Medtr6g005440 Medicago truncatula HOM05D008089 ORTHO05D000166 2.8e-06 56.6 76 38.2
PGR042G3771 Punica granatum HOM05D000307 ORTHO05D000166 2.8e-06 56.6 76 36.8
Sabra02G0194300 Salix brachista HOM05D028904 ORTHO05D000166 2.8e-06 56.6 72 40.3
TPR.G26403 Trifolium pratense HOM05D008089 ORTHO05D000166 2.8e-06 56.6 76 36.8
Cpa.g.sc0.43 Carica papaya HOM05D000307 ORTHO05D000166 3.6e-06 56.2 88 39.8
Lalb_Chr23g0265491 Lupinus albus HOM05D000307 ORTHO05D000166 3.6e-06 56.2 71 45.1
VMungo0647G1946 Vigna mungo HOM05D008089 ORTHO05D000166 3.6e-06 56.2 71 38.0
Ca_13731_v3 Cicer arietinum L. HOM05D000307 ORTHO05D000166 4.7e-06 55.8 76 38.2
SGA_v2.0_scaffold58G20582 Striga asiatica HOM05D000370 ORTHO05D000166 4.7e-06 55.8 92 33.7
Eucgr.K02593 Eucalyptus grandis HOM05D000307 ORTHO05D000166 6.2e-06 55.5 81 33.3
Eucgr.K02595 Eucalyptus grandis HOM05D000307 ORTHO05D000166 6.2e-06 55.5 74 36.5
Medtr6g018920 Medicago truncatula HOM05D000307 ORTHO05D000166 6.2e-06 55.5 81 37.0
Sabra16G0128300 Salix brachista HOM05D000307 ORTHO05D009271 6.2e-06 55.5 81 38.3
Lalb_Chr02g0147511 Lupinus albus HOM05D000307 ORTHO05D000166 8.1e-06 55.1 76 46.1
Potri.001G214900 Populus trichocarpa HOM05D000307 ORTHO05D000166 8.1e-06 55.1 81 38.3


User provided reference genes

Program Settings