Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G1348 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.1e-108 396.7 209 100.0
FAN10G0476 Fragaria x ananassa HOM05D004948 ORTHO05D005824 2.7e-104 382.1 219 93.6
FAN06G2108 Fragaria x ananassa HOM05D004948 ORTHO05D005824 6.1e-104 380.9 219 93.2
FAN10G0469 Fragaria x ananassa HOM05D004948 ORTHO05D005824 8.0e-104 380.6 219 93.2
FAN01G0333 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.5e-102 376.3 219 92.2
FAN06G4897 Fragaria x ananassa HOM05D004948 ORTHO05D005824 2.6e-102 375.6 219 92.2
FvH4_7g30910 Fragaria vesca HOM05D004948 ORTHO05D005824 2.2e-101 372.5 227 88.5
Prupe.2G306200 Prunus persica HOM05D004948 ORTHO05D005824 1.3e-77 293.5 233 69.5
Thecc.03G191700 Theobroma cacao HOM05D004948 ORTHO05D005824 6.3e-77 291.2 223 70.9
Duzib068G0205 Durio zibethinus HOM05D004948 ORTHO05D005824 7.0e-76 287.7 223 70.0
MD07G1283800 Malus domestica HOM05D004948 ORTHO05D005824 9.2e-76 287.3 227 70.9
MD01G1214200 Malus domestica HOM05D004948 ORTHO05D005824 1.2e-75 287.0 225 69.8
COL.COLO4_04803 Corchorus olitorius HOM05D004948 ORTHO05D005824 4.5e-75 285.0 223 69.1
ClCG01G000640 Citrullus lanatus HOM05D004948 ORTHO05D005824 3.9e-74 282.0 221 69.2
MELO3C005865.2 Cucumis melo HOM05D004948 ORTHO05D005824 5.0e-74 281.6 194 74.7
CsaV3_5G000730 Cucumis sativus L. HOM05D004948 ORTHO05D005824 6.6e-74 281.2 194 74.2
CiPaw.06G006800 Carya illinoinensis HOM05D004948 ORTHO05D005824 1.5e-73 280.0 220 67.7
Dinv28347 Davidia involucrata HOM05D004948 ORTHO05D005824 1.9e-73 279.6 225 68.0
Cpa.g.sc3.41 Carica papaya HOM05D004948 ORTHO05D005824 1.2e-72 276.9 226 68.1
Actinidia34187 Actinidia chinensis HOM05D004948 ORTHO05D005824 2.1e-72 276.2 220 68.6
Ciclev10005800m.g Citrus clementina HOM05D004948 ORTHO05D005824 2.8e-72 275.8 226 67.3
Hma1.2p1_0142F.1_g064080 Hydrangea macrophylla HOM05D004948 ORTHO05D005824 2.8e-72 275.8 230 66.1
QL09p011186 Quercus lobata HOM05D004948 ORTHO05D005824 2.8e-72 275.8 221 70.1
Manes.06G156200 Manihot esculenta HOM05D004948 ORTHO05D005824 3.6e-72 275.4 222 69.4
SalBow2G2244 Salvia bowleyana HOM05D004948 ORTHO05D005824 4.7e-72 275.0 222 67.1
Duzib205G0398 Durio zibethinus HOM05D004948 ORTHO05D005824 1.0e-71 273.9 223 67.3
Sed0002242 Sechium edule HOM05D004948 ORTHO05D005824 3.1e-71 272.3 215 66.5
Duzib084G1367 Durio zibethinus HOM05D004948 ORTHO05D005824 5.2e-71 271.6 213 69.0
Gohir.A12G252400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 5.2e-71 271.6 208 68.3
PGSC0003DMG400009097 Solanum tuberosum HOM05D004948 ORTHO05D005824 5.2e-71 271.6 202 71.3
Dinv35301 Davidia involucrata HOM05D004948 ORTHO05D005824 6.8e-71 271.2 203 71.4
RcHm_v2.0_Chr1g0379991 Rosa chinensis HOM05D004948 ORTHO05D005824 6.8e-71 271.2 172 84.9
Cfa016354 Carpinus fangiana HOM05D004948 ORTHO05D005824 1.5e-70 270.0 222 66.7
Gorai.008G271400 Gossypium raimondii HOM05D004948 ORTHO05D005824 1.5e-70 270.0 208 67.8
CAN.G108.18 Capsicum annuum HOM05D004948 ORTHO05D005824 2.6e-70 269.2 214 66.8
CANSAT21G0873 Cannabis sativa HOM05D004948 ORTHO05D005824 3.4e-70 268.9 223 62.8
SGA_v2.0_scaffold10G05268 Striga asiatica HOM05D004948 ORTHO05D005824 3.4e-70 268.9 202 72.3
GSVIVG01028728001 Vitis vinifera HOM05D004948 ORTHO05D005824 4.4e-70 268.5 223 65.9
Gohir.D12G253100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 7.5e-70 267.7 208 67.3
Potri.012G033100 Populus trichocarpa HOM05D004948 ORTHO05D005824 9.8e-70 267.3 202 71.3
MSTRG.65 Avicennia marina HOM05D004948 ORTHO05D005824 1.3e-69 266.9 207 67.6
Eucgr.A02670 Eucalyptus grandis HOM05D004948 ORTHO05D005824 1.3e-69 266.9 233 63.9
arahy.Tifrunner.gnm1.ann1.LZU7FF Arachis hypogaea HOM05D004948 ORTHO05D005824 2.9e-69 265.8 200 69.0
PGR042G1790 Punica granatum HOM05D004948 ORTHO05D005824 2.9e-69 265.8 188 75.0
Migut.F01058 Erythranthe guttata HOM05D004948 ORTHO05D005824 4.9e-69 265.0 199 70.9
Solyc03g007480.3 Solanum lycopersicum HOM05D004948 ORTHO05D005824 8.3e-69 264.2 202 68.8
Sopen03g003430 Solanum pennellii HOM05D004948 ORTHO05D005824 8.3e-69 264.2 202 68.8
Atru.chr1.284 Acer truncatum HOM05D004948 ORTHO05D005824 1.1e-68 263.8 216 68.1
TAR629G2953 Trochodendron aralioides HOM05D004948 ORTHO05D005824 1.4e-68 263.5 225 65.8
Haze_00103 Corylus avellana HOM05D004948 ORTHO05D005824 1.9e-68 263.1 237 62.4
PGR083G1298 Punica granatum HOM05D004948 ORTHO05D005824 1.9e-68 263.1 224 66.1
Oeu037114.1 Olea europaea HOM05D004948 ORTHO05D005824 3.2e-68 262.3 217 66.8
vmacro06582 Vaccinium macrocarpon HOM05D004948 ORTHO05D005824 3.5e-67 258.8 233 63.1
MBI07_g20438_MAGBIO Magnolia biondii HOM05D004948 ORTHO05D005824 1.0e-66 257.3 220 66.8
Lj1g0018821 Lotus japonicus HOM05D004948 ORTHO05D005824 2.3e-66 256.1 230 63.0
Peaxi162Scf00904g00460 Petunia axillaris HOM05D004948 ORTHO05D005824 3.9e-66 255.4 180 75.6
Potri.015G023400 Populus trichocarpa HOM05D004948 ORTHO05D005824 8.6e-66 254.2 221 64.7
TAR636G2931 Trochodendron aralioides HOM05D004948 ORTHO05D005824 5.6e-65 251.5 226 63.7
PGSC0003DMG400028892 Solanum tuberosum HOM05D004948 ORTHO05D005824 3.6e-64 248.8 219 61.6
Peaxi162Scf00618g00525 Petunia axillaris HOM05D004948 ORTHO05D005824 1.4e-63 246.9 188 70.7
Aqoxy5G04108 Aquilegia oxysepala HOM05D004948 ORTHO05D005824 3.1e-63 245.7 215 61.9
Solyc06g051820.4 Solanum lycopersicum HOM05D004948 ORTHO05D005824 4.0e-63 245.4 205 64.9
Lsat_1_v5_gn_8_6120 Lactuca sativa HOM05D004948 ORTHO05D005824 2.0e-62 243.0 220 58.6
Rhsim03G0197700 Rhododendron simsii HOM05D004948 ORTHO05D005824 2.0e-62 243.0 220 62.3
Sopen06g017830 Solanum pennellii HOM05D004948 ORTHO05D005824 4.4e-62 241.9 206 64.1
EL10Ac3g05356 Beta vulgaris HOM05D004948 ORTHO05D005824 5.8e-62 241.5 211 59.7
HanXRQChr13g0392981 Helianthus annuus HOM05D004948 ORTHO05D005824 7.5e-62 241.1 217 60.8
AUR62031482 Chenopodium quinoa HOM05D004948 ORTHO05D005824 1.3e-61 240.4 211 60.2
THA.LOC104800283 Tarenaya hassleriana HOM05D004948 ORTHO05D005824 2.9e-61 239.2 178 70.8
Glyma.13G040600 Glycine max HOM05D004948 ORTHO05D005824 3.7e-61 238.8 206 63.1
AUR62021051 Chenopodium quinoa HOM05D004948 ORTHO05D005824 6.4e-61 238.0 221 58.8
ECA233G3864 Erigeron canadensis HOM05D004948 ORTHO05D005824 6.4e-61 238.0 214 62.1
ATR1132G055 Amborella trichopoda HOM05D004948 ORTHO05D005824 8.3e-61 237.7 185 64.3
Sc19g0001090 Simmondsia chinensis HOM05D004948 ORTHO05D005824 2.7e-59 232.6 206 59.2
Aa31LG5G23580 Aethionema arabicum HOM05D004948 ORTHO05D005824 7.8e-59 231.1 199 62.8
Aa31sc29G60 Aethionema arabicum HOM05D004948 ORTHO05D005824 3.0e-58 229.2 199 62.3
Manes.14G019200 Manihot esculenta HOM05D004948 ORTHO05D005824 8.6e-58 227.6 202 60.9
DCAR_010636 Daucus carota HOM05D004948 ORTHO05D005824 1.1e-57 227.3 217 58.1
Lalb_Chr04g0263671 Lupinus albus HOM05D004948 ORTHO05D005824 3.3e-57 225.7 202 59.4
Carub.0008s1349 Capsella rubella HOM05D004948 ORTHO05D005824 2.1e-56 223.0 219 58.0
Sp6g15460 Schrenkiella parvula HOM05D004948 ORTHO05D005824 6.2e-56 221.5 219 58.9
TWI23G0483 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 8.1e-56 221.1 181 64.1
Sabra12G0022300 Salix brachista HOM05D004948 ORTHO05D005824 3.1e-55 219.2 198 65.2
Nn2g13651 Nelumbo nucifera HOM05D004948 ORTHO05D005824 4.0e-55 218.8 157 73.2
Nitab4.5_0000472g0200 Nicotiana tabacum HOM05D004948 ORTHO05D005824 5.2e-55 218.4 186 64.5
Nitab4.5_0001331g0180 Nicotiana tabacum HOM05D004948 ORTHO05D005824 5.2e-55 218.4 186 64.5
arahy.Tifrunner.gnm1.ann1.MD6354 Arachis hypogaea HOM05D004948 ORTHO05D005824 6.8e-55 218.0 169 67.5
BcaB05g22031 Brassica carinata HOM05D004948 ORTHO05D005824 1.2e-54 217.2 174 65.5
AL8G28010 Arabidopsis lyrata HOM05D004948 ORTHO05D005824 2.6e-54 216.1 223 56.5
BcaC03g14431 Brassica carinata HOM05D004948 ORTHO05D005824 4.4e-54 215.3 213 57.3
C02p18470 Brassica napus HOM05D004948 ORTHO05D005824 4.4e-54 215.3 213 57.3
BolC2t07987H Brassica oleracea HOM05D004948 ORTHO05D005824 4.4e-54 215.3 213 57.3
Thhalv10014692m.g Eutrema salsugineum HOM05D004948 ORTHO05D005824 5.8e-54 214.9 175 64.6
AT5G53310 Arabidopsis thaliana HOM05D004948 ORTHO05D005824 9.9e-54 214.2 177 62.7
CARHR266350 Cardamine hirsuta HOM05D004948 ORTHO05D005824 2.2e-53 213.0 211 56.9
Hund27721 Selenicereus undatus HOM05D004948 ORTHO05D005824 3.7e-53 212.2 230 55.2
Hund27734 Selenicereus undatus HOM05D004948 ORTHO05D005824 3.7e-53 212.2 230 55.2
A02p11140 Brassica napus HOM05D004948 ORTHO05D005824 1.1e-52 210.7 216 55.6
BraA02t06177Z Brassica rapa HOM05D004948 ORTHO05D005824 1.1e-52 210.7 216 55.6
Lj3A912T42 Lonicera japonica HOM05D004948 ORTHO05D005824 1.1e-52 210.7 197 59.9
Aa31LG3G9220 Aethionema arabicum HOM05D004948 ORTHO05D005824 1.4e-52 210.3 176 60.8
Cc02_g01980 Coffea canephora HOM05D004948 ORTHO05D005824 1.0e-50 204.1 219 55.7
Ca_16670_v3 Cicer arietinum L. HOM05D004948 ORTHO05D005824 2.3e-50 203.0 157 68.8
CAN.G204.5 Capsicum annuum HOM05D004948 ORTHO05D005824 5.1e-50 201.8 182 60.4
Os01g0621700 Oryza sativa ssp. japonica HOM05D004948 ORTHO05D005824 5.1e-50 201.8 171 60.8
Gohir.D09G178100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 6.6e-50 201.4 156 67.3
Gorai.006G200200 Gossypium raimondii HOM05D004948 ORTHO05D005824 6.6e-50 201.4 156 67.3
Actinidia31860 Actinidia chinensis HOM05D004948 ORTHO05D005824 8.6e-50 201.1 202 58.9
Gohir.A09G183400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 1.1e-49 200.7 156 66.7
Lj1g0003063 Lotus japonicus HOM05D004948 ORTHO05D005824 2.5e-49 199.5 157 66.9
CDE04G0161 Ceratophyllum demersum HOM05D004948 ORTHO05D005824 1.8e-47 193.4 190 52.1
Glyma.04G238900 Glycine max HOM05D004948 ORTHO05D005824 1.8e-47 193.4 157 68.2
Psat0s97g0080 Pisum sativum HOM05D004948 ORTHO05D005824 1.5e-46 190.3 157 65.6
unitig_747.g21853 Utricularia gibba HOM05D004948 ORTHO05D005824 1.5e-46 190.3 156 67.9
CSS0002011 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 2.0e-46 189.9 118 82.2
TPR.G33862 Trifolium pratense HOM05D004948 ORTHO05D005824 4.4e-46 188.7 157 63.1
TWI39G0355 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 9.9e-46 187.6 128 73.4
arahy.Tifrunner.gnm1.ann1.NIM4HJ Arachis hypogaea HOM05D004948 ORTHO05D005824 6.4e-45 184.9 157 63.1
Phvul.009G135700 Phaseolus vulgaris HOM05D004948 ORTHO05D005824 8.4e-45 184.5 157 64.3
HPP92_024433 Vanilla planifolia HOM05D004948 ORTHO05D005824 1.1e-44 184.1 155 59.4
DCAR_014528 Daucus carota HOM05D000121 ORTHO05D005824 1.4e-44 183.7 155 61.3
Glyma.06G124800 Glycine max HOM05D004948 ORTHO05D005824 2.4e-44 183.0 157 65.0
DCAR_008996 Daucus carota HOM05D002473 ORTHO05D005824 4.2e-44 182.2 180 54.4
Lalb_Chr08g0240671 Lupinus albus HOM05D004948 ORTHO05D005824 7.1e-44 181.4 157 63.7
VMungo1309G3087 Vigna mungo HOM05D004948 ORTHO05D005824 6.0e-43 178.3 193 53.4
Nitab4.5_0002176g0030 Nicotiana tabacum HOM05D004948 ORTHO05D005824 7.8e-43 177.9 117 76.9
SHI54648 Sapria himalayana HOM05D004948 ORTHO05D005824 5.1e-42 175.3 176 57.4
SHI54754 Sapria himalayana HOM05D004948 ORTHO05D005824 5.1e-42 175.3 176 57.4
arahy.Tifrunner.gnm1.ann1.AMC2P5 Arachis hypogaea HOM05D004948 ORTHO05D005824 8.7e-42 174.5 172 57.6
Mapoly0143s0028 Marchantia polymorpha HOM05D004948 ORTHO05D005824 1.5e-41 173.7 181 53.6
Ah.07g206090 Amaranthus hybridus HOM05D004948 ORTHO05D005824 1.9e-41 173.3 208 50.0
Medtr3g090670 Medicago truncatula HOM05D004948 ORTHO05D005824 1.9e-41 173.3 147 61.9
Zm00001eb432120 Zea mays HOM05D004948 ORTHO05D005824 1.9e-41 173.3 144 62.5
Actinidia08617 Actinidia chinensis HOM05D004948 ORTHO05D005824 3.6e-40 169.1 144 68.1
SMO361G0401 Selaginella moellendorffii HOM05D004948 ORTHO05D005824 1.4e-39 167.2 204 46.1
AagrBONN_evm.TU.Sc2ySwM_362.1882 Anthoceros agrestis HOM05D004948 ORTHO05D005824 1.1e-36 157.5 194 45.9
SEGI_09652 Sequoiadendron giganteum HOM05D004948 ORTHO05D005824 3.0e-34 149.4 127 57.5
CSS0025713 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 3.9e-34 149.1 97 76.3
CSS0008262 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 1.1e-33 147.5 97 75.3
Pp3c8_900 Physcomitrium patens HOM05D004948 ORTHO05D005824 1.9e-33 146.7 183 46.4
BolC9t57186H Brassica oleracea HOM05D004948 ORTHO05D005824 7.3e-33 144.8 224 45.1
Lj1P1012T60 Lonicera japonica HOM05D004948 ORTHO05D005824 7.3e-33 144.8 108 69.4
BcaC04g20470 Brassica carinata HOM05D004948 ORTHO05D005824 4.8e-32 142.1 224 43.8
C09p43150 Brassica napus HOM05D004948 ORTHO05D005824 9.0e-31 137.9 214 44.9
CBR_g39340 Chara braunii HOM05D004948 ORTHO05D005824 1.1e-28 131.0 157 45.2
BcaB08g35692 Brassica carinata HOM05D004948 ORTHO05D005824 2.3e-18 96.7 87 60.9
MCO05G504 Micromonas commoda HOM05D004948 ORTHO05D005824 2.3e-18 96.7 204 32.8
Lalb_Chr23g0271431 Lupinus albus HOM05D004948 ORTHO05D005824 6.9e-15 85.1 147 40.8
CSS0011379 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 1.3e-13 80.9 95 49.5
CSS0022164 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 1.3e-13 80.9 95 49.5
CSS0007759 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 3.5e-11 72.8 80 51.2


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