Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G1297 Fragaria x ananassa HOM05D008545 ORTHO05D010341 2.5e-124 448.7 223 100.0
FAN10G0919 Fragaria x ananassa HOM05D008545 ORTHO05D010341 1.0e-117 426.8 223 95.5
FAN01G1302 Fragaria x ananassa HOM05D008545 ORTHO05D010341 1.3e-117 426.4 223 95.1
FAN10G3148 Fragaria x ananassa HOM05D008545 ORTHO05D010341 3.0e-117 425.2 223 95.1
FvH4_7g15870 Fragaria vesca HOM05D008545 ORTHO05D010341 1.3e-115 419.9 223 94.2
FAN06G5050 Fragaria x ananassa HOM05D008545 ORTHO05D010341 1.8e-114 416.0 223 93.3
RcHm_v2.0_Chr1g0358691 Rosa chinensis HOM05D008545 ORTHO05D010341 8.8e-101 370.5 223 85.7
FAN06G3211 Fragaria x ananassa HOM05D008545 ORTHO05D010341 5.9e-81 304.7 163 93.3
MD07G1144400 Malus domestica HOM05D008545 ORTHO05D010341 1.7e-59 233.4 230 58.7
Prupe.2G183300 Prunus persica HOM05D008545 ORTHO05D010341 2.8e-54 216.1 215 58.6
Thecc.01G347700 Theobroma cacao HOM05D008545 ORTHO05D010341 4.9e-43 178.7 217 45.6
Atru.chr5.619 Acer truncatum HOM05D008545 ORTHO05D010341 8.1e-38 161.4 223 45.7
Duzib138G0500 Durio zibethinus HOM05D008545 ORTHO05D010341 8.1e-38 161.4 217 42.9
Gohir.D07G144800 Gossypium hirsutum HOM05D008545 ORTHO05D010341 1.1e-34 151.0 220 41.4
Gorai.001G156800 Gossypium raimondii HOM05D008545 ORTHO05D010341 1.1e-34 151.0 220 41.4
Gohir.A07G139700 Gossypium hirsutum HOM05D008545 ORTHO05D010341 2.4e-34 149.8 220 40.9
GSVIVG01027047001 Vitis vinifera HOM05D008545 ORTHO05D010341 1.6e-33 147.1 227 42.7
TAR629G2366 Trochodendron aralioides HOM05D008545 ORTHO05D010341 6.2e-30 135.2 216 40.7
Eucgr.D02345 Eucalyptus grandis HOM05D008545 ORTHO05D010341 3.4e-28 129.4 217 41.5
Dinv43892 Davidia involucrata HOM05D008545 ORTHO05D010341 1.7e-27 127.1 213 39.0
Potri.002G167500 Populus trichocarpa HOM05D008545 ORTHO05D010341 1.7e-27 127.1 227 38.3
Potri.014G094600 Populus trichocarpa HOM05D008545 ORTHO05D010341 1.7e-27 127.1 226 37.6
MD01G1075500 Malus domestica HOM05D008545 ORTHO05D010341 2.3e-24 116.7 110 64.5
Manes.01G249300 Manihot esculenta HOM05D008545 ORTHO05D010341 1.6e-22 110.5 216 34.7
Lj9A592T71 Lonicera japonica HOM05D008545 ORTHO05D010341 1.1e-21 107.8 227 34.8
Lj7A504G55 Lonicera japonica HOM05D008545 ORTHO05D010341 2.4e-21 106.7 203 36.5
CSS0024380 Camellia sinensis var. sinensis HOM05D008545 ORTHO05D010341 6.9e-21 105.1 217 35.5
PGR031G2054 Punica granatum HOM05D008545 ORTHO05D010341 5.8e-20 102.1 229 34.5
CANSAT56G3993 Cannabis sativa HOM05D008545 ORTHO05D010341 1.3e-16 90.9 196 34.2
Sabra14G0069200 Salix brachista HOM05D008545 ORTHO05D010341 3.0e-16 89.7 121 45.5
DCAR_016077 Daucus carota HOM05D009167 ORTHO05D010341 8.7e-16 88.2 224 33.9
Peaxi162Scf00403g00718 Petunia axillaris HOM05D008545 ORTHO05D010341 3.1e-13 79.7 174 33.3
Hma1.2p1_0384F.1_g141050 Hydrangea macrophylla HOM05D008545 ORTHO05D010341 5.3e-13 79.0 91 48.4
CAN.G310.5 Capsicum annuum HOM05D008545 ORTHO05D010341 2.6e-12 76.6 148 35.8
Nitab4.5_0002262g0100 Nicotiana tabacum HOM05D008545 ORTHO05D010341 2.6e-12 76.6 158 36.7
Actinidia20194 Actinidia chinensis HOM05D008545 ORTHO05D010341 4.9e-11 72.4 195 31.8
Nn1g01793 Nelumbo nucifera HOM05D008545 ORTHO05D010341 7.1e-10 68.6 167 30.5
Solyc05g050240.3 Solanum lycopersicum HOM05D008545 ORTHO05D010341 4.6e-09 65.9 155 30.3
MBI06_g22406_MAGBIO Magnolia biondii HOM05D004891 ORTHO05D010341 7.9e-09 65.1 162 31.5
PGSC0003DMG400033878 Solanum tuberosum HOM05D008545 ORTHO05D010341 1.0e-08 64.7 150 32.0
COL.COLO4_06334 Corchorus olitorius HOM05D002314 ORTHO05D002538 9.6e-07 58.2 52 53.8
SGA_v2.0_scaffold5G02985 Striga asiatica HOM05D008545 ORTHO05D010341 9.6e-07 58.2 107 35.5
Migut.B01833 Erythranthe guttata HOM05D008545 ORTHO05D010341 1.6e-06 57.4 81 39.5
MSTRG.17319 Avicennia marina HOM05D008545 ORTHO05D010341 2.1e-06 57.0 93 37.6


User provided reference genes

Program Settings