Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G1282 Fragaria x ananassa HOM05D006363 ORTHO05D007920 1.9e-107 392.5 201 100.0
FAN03G1027 Fragaria x ananassa HOM05D006363 ORTHO05D007920 8.2e-106 387.1 204 98.5
FAN06G3284 Fragaria x ananassa HOM05D006363 ORTHO05D007920 1.7e-103 379.4 204 96.6
FAN06G3928 Fragaria x ananassa HOM05D006363 ORTHO05D007920 3.8e-103 378.3 204 96.1
FvH4_7g29240 Fragaria vesca HOM05D006363 ORTHO05D007920 8.5e-103 377.1 204 95.6
FAN10G0438 Fragaria x ananassa HOM05D006363 ORTHO05D007920 8.5e-103 377.1 204 95.6
RcHm_v2.0_Chr1g0376991 Rosa chinensis HOM05D006363 ORTHO05D007920 6.7e-100 367.5 204 93.6
Prupe.2G292400 Prunus persica HOM05D006363 ORTHO05D007920 5.0e-87 324.7 207 83.6
Sabra15G0151200 Salix brachista HOM05D006363 ORTHO05D007920 5.5e-86 321.2 202 81.7
MD01G1199000 Malus domestica HOM05D006363 ORTHO05D007920 2.3e-84 315.8 197 82.7
MD07G1266800 Malus domestica HOM05D006363 ORTHO05D007920 6.7e-84 314.3 195 83.6
CiPaw.03G104700 Carya illinoinensis HOM05D006363 ORTHO05D007920 1.1e-83 313.5 195 82.1
Haze_13734 Corylus avellana HOM05D006363 ORTHO05D007920 3.3e-83 312.0 198 80.8
Cfa008303 Carpinus fangiana HOM05D006363 ORTHO05D007920 1.3e-82 310.1 198 79.8
Gohir.D12G260100 Gossypium hirsutum HOM05D006363 ORTHO05D007920 2.4e-81 305.8 197 82.7
Gohir.A12G258900 Gossypium hirsutum HOM05D006363 ORTHO05D007920 3.1e-81 305.4 197 82.7
Gorai.008G278600 Gossypium raimondii HOM05D006363 ORTHO05D007920 4.1e-81 305.1 197 82.7
Potri.015G140600 Populus trichocarpa HOM05D006363 ORTHO05D007920 1.2e-80 303.5 199 78.4
Medtr1g100753 Medicago truncatula HOM05D006363 ORTHO05D007920 2.0e-80 302.8 207 76.3
QL09p014582 Quercus lobata HOM05D006363 ORTHO05D007920 2.6e-80 302.4 201 77.6
TPR.G14326 Trifolium pratense HOM05D006363 ORTHO05D007920 3.5e-80 302.0 204 76.5
Ciclev10007013m.g Citrus clementina HOM05D006363 ORTHO05D007920 5.9e-80 301.2 206 76.7
Manes.07G111200 Manihot esculenta HOM05D006363 ORTHO05D007920 5.9e-80 301.2 200 79.0
Psat6g200600 Pisum sativum HOM05D006363 ORTHO05D007920 7.7e-80 300.8 204 76.5
Duzib205G1779 Durio zibethinus HOM05D006363 ORTHO05D007920 1.0e-79 300.4 199 81.4
TWI39G0139 Tripterygium wilfordii HOM05D006363 ORTHO05D007920 1.7e-79 299.7 202 76.2
COL.COLO4_14288 Corchorus olitorius HOM05D006363 ORTHO05D007920 3.8e-79 298.5 196 80.6
Thecc.03G174500 Theobroma cacao HOM05D006363 ORTHO05D007920 3.8e-79 298.5 197 80.7
Atru.chr1.482 Acer truncatum HOM05D006363 ORTHO05D007920 4.2e-78 295.0 196 76.5
Glyma.10G237500 Glycine max HOM05D006363 ORTHO05D007920 4.2e-78 295.0 207 75.8
Ca_10782_v3 Cicer arietinum L. HOM05D006363 ORTHO05D007920 5.5e-78 294.7 198 77.8
VMungo0720G1872 Vigna mungo HOM05D006363 ORTHO05D007920 1.6e-77 293.1 208 76.0
Glyma.20G157100 Glycine max HOM05D006363 ORTHO05D007920 2.7e-77 292.4 197 78.2
PGR042G3170 Punica granatum HOM05D006363 ORTHO05D007920 1.4e-76 290.0 208 73.6
Cpa.g.sc107.33 Carica papaya HOM05D006363 ORTHO05D007920 1.8e-76 289.7 202 72.8
LjContig00238g0019616 Lotus japonicus HOM05D006363 ORTHO05D007920 1.8e-76 289.7 205 74.6
Phvul.007G068100 Phaseolus vulgaris HOM05D006363 ORTHO05D007920 1.8e-76 289.7 195 77.4
FAN01G1422 Fragaria x ananassa HOM05D006363 ORTHO05D007920 2.0e-75 286.2 201 77.6
Aa31LG3G8570 Aethionema arabicum HOM05D006363 ORTHO05D007920 3.7e-74 282.0 195 73.3
THA.LOC104811988 Tarenaya hassleriana HOM05D006363 ORTHO05D007920 3.7e-74 282.0 202 71.3
Thhalv10015742m.g Eutrema salsugineum HOM05D006363 ORTHO05D007920 4.8e-74 281.6 204 71.1
Lalb_Chr02g0140961 Lupinus albus HOM05D006363 ORTHO05D007920 5.3e-73 278.1 200 69.5
Rhsim09G0197500 Rhododendron simsii HOM05D006363 ORTHO05D007920 5.3e-73 278.1 195 75.4
CARHR265110 Cardamine hirsuta HOM05D006363 ORTHO05D007920 7.0e-73 277.7 207 69.6
CsaV3_3G016980 Cucumis sativus L. HOM05D006363 ORTHO05D007920 1.2e-72 276.9 206 72.8
MELO3C006895.2 Cucumis melo HOM05D006363 ORTHO05D007920 1.6e-72 276.6 206 73.3
Carub.0008s1228 Capsella rubella HOM05D006363 ORTHO05D007920 1.7e-71 273.1 205 69.8
vmacro09843 Vaccinium macrocarpon HOM05D006363 ORTHO05D007920 1.7e-71 273.1 195 72.8
BcaB01g04190 Brassica carinata HOM05D006363 ORTHO05D007920 1.9e-70 269.6 197 71.6
CANSAT21G2254 Cannabis sativa HOM05D006363 ORTHO05D007920 1.9e-70 269.6 198 76.3
AUR62016007 Chenopodium quinoa HOM05D006363 ORTHO05D007920 1.9e-70 269.6 194 73.2
Sed0019375 Sechium edule HOM05D006363 ORTHO05D007920 2.5e-70 269.2 200 72.0
BcaC01g06171 Brassica carinata HOM05D006363 ORTHO05D007920 3.2e-70 268.9 197 71.1
BraA03t10870Z Brassica rapa HOM05D006363 ORTHO05D007920 3.2e-70 268.9 197 71.1
AUR62021214 Chenopodium quinoa HOM05D006363 ORTHO05D007920 3.2e-70 268.9 206 70.9
Eucgr.A02801 Eucalyptus grandis HOM05D006363 ORTHO05D007920 7.2e-70 267.7 212 68.4
GSVIVG01010552001 Vitis vinifera HOM05D006363 ORTHO05D007920 7.2e-70 267.7 203 70.0
BolC3t14244H Brassica oleracea HOM05D006363 ORTHO05D007920 9.4e-70 267.3 197 70.6
AL8G26570 Arabidopsis lyrata HOM05D006363 ORTHO05D007920 1.6e-69 266.5 201 70.1
CANSAT21G0627 Cannabis sativa HOM05D006363 ORTHO05D007920 2.1e-69 266.2 198 76.3
C03p18470 Brassica napus HOM05D006363 ORTHO05D007920 3.6e-69 265.4 197 70.1
CSS0002932 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 3.6e-69 265.4 205 68.8
Peaxi162Scf00915g00018 Petunia axillaris HOM05D006363 ORTHO05D007920 3.6e-69 265.4 204 69.1
CSS0028509 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 4.7e-69 265.0 206 68.4
EL10Ac3g05667 Beta vulgaris HOM05D006363 ORTHO05D007920 1.0e-68 263.8 195 70.8
Dinv28459 Davidia involucrata HOM05D006363 ORTHO05D007920 1.4e-68 263.5 209 66.0
Sp6g14440 Schrenkiella parvula HOM05D006363 ORTHO05D007920 2.3e-68 262.7 199 68.8
AT5G52190 Arabidopsis thaliana HOM05D006363 ORTHO05D007920 8.8e-68 260.8 208 66.8
Migut.F01133 Erythranthe guttata HOM05D006363 ORTHO05D007920 1.5e-67 260.0 202 66.3
Sopen03g004810 Solanum pennellii HOM05D006363 ORTHO05D007920 4.4e-67 258.5 205 66.8
MSTRG.8448 Avicennia marina HOM05D006363 ORTHO05D007920 5.7e-67 258.1 205 67.8
Solyc03g025990.1 Solanum lycopersicum HOM05D006363 ORTHO05D007920 7.5e-67 257.7 205 66.8
Lsat_1_v5_gn_2_133820 Lactuca sativa HOM05D006363 ORTHO05D007920 9.8e-67 257.3 202 65.8
ECA238G0548 Erigeron canadensis HOM05D006363 ORTHO05D007920 1.7e-66 256.5 201 68.7
Lj8C25T12 Lonicera japonica HOM05D006363 ORTHO05D007920 1.7e-66 256.5 196 68.4
Oeu062762.2 Olea europaea HOM05D006363 ORTHO05D007920 2.2e-66 256.1 208 65.4
Nitab4.5_0001508g0030 Nicotiana tabacum HOM05D006363 ORTHO05D007920 3.7e-66 255.4 205 67.3
PGSC0003DMG400014325 Solanum tuberosum HOM05D006363 ORTHO05D007920 4.8e-66 255.0 205 66.8
Cc03_g13850 Coffea canephora HOM05D006363 ORTHO05D007920 5.4e-65 251.5 196 67.3
Nn6g34197 Nelumbo nucifera HOM05D006363 ORTHO05D007920 7.0e-65 251.1 202 65.3
Nitab4.5_0000716g0210 Nicotiana tabacum HOM05D006363 ORTHO05D007920 1.2e-64 250.4 202 65.3
HanXRQChr14g0462221 Helianthus annuus HOM05D006363 ORTHO05D007920 2.7e-64 249.2 204 65.7
Ah.13g075440 Amaranthus hybridus HOM05D006363 ORTHO05D007920 1.1e-62 243.8 185 70.3
unitig_60.g25545 Utricularia gibba HOM05D006363 ORTHO05D007920 4.2e-62 241.9 196 68.4
PSO782G5704 Papaver somniferum HOM05D006363 ORTHO05D007920 4.7e-61 238.4 226 58.0
Aqoxy7G00395 Aquilegia oxysepala HOM05D006363 ORTHO05D007920 1.4e-60 236.9 205 61.0
DCAR_018188 Daucus carota HOM05D006363 ORTHO05D007920 1.4e-60 236.9 202 61.4
CAN.G947.11 Capsicum annuum HOM05D006363 ORTHO05D007920 2.3e-60 236.1 192 66.7
MBI04_g04731_MAGBIO Magnolia biondii HOM05D006363 ORTHO05D007920 1.5e-59 233.4 204 61.3
PSO478G1739 Papaver somniferum HOM05D006363 ORTHO05D007920 2.8e-58 229.2 225 56.0
TAR375G0304 Trochodendron aralioides HOM05D006363 ORTHO05D007920 6.3e-58 228.0 184 64.7
Zm00001eb428810 Zea mays HOM05D006363 ORTHO05D007920 9.5e-54 214.2 202 59.4
Os04g0568600 Oryza sativa ssp. japonica HOM05D006363 ORTHO05D007920 4.7e-53 211.8 194 60.3
A03p15800 Brassica napus HOM05D006363 ORTHO05D007920 2.0e-51 206.5 143 76.2
CDE04G1845 Ceratophyllum demersum HOM05D006363 ORTHO05D007920 1.7e-50 203.4 180 61.1
ATR0757G111 Amborella trichopoda HOM05D006363 ORTHO05D007920 2.2e-50 203.0 203 58.1
HPP92_021110 Vanilla planifolia HOM05D006363 ORTHO05D007920 1.4e-49 200.3 176 61.4
Sc25g0000440 Simmondsia chinensis HOM05D006363 ORTHO05D007920 2.2e-42 176.4 142 65.5
SalBow2G2214 Salvia bowleyana HOM05D006363 ORTHO05D007920 9.2e-41 171.0 143 62.2
SEGI_31787 Sequoiadendron giganteum HOM05D006363 ORTHO05D007920 3.0e-39 166.0 201 49.3
A08p37210 Brassica napus HOM05D006363 ORTHO05D007920 8.6e-39 164.5 135 64.4
Pp3c6_24270 Physcomitrium patens HOM05D006363 ORTHO05D007920 2.1e-37 159.8 210 46.2
SMO367G0077 Selaginella moellendorffii HOM05D006363 ORTHO05D007920 9.9e-35 151.0 169 54.4
BcaC01g06168 Brassica carinata HOM05D006363 ORTHO05D007920 7.1e-25 118.2 92 64.1
BcaC06g36545 Brassica carinata HOM05D006363 ORTHO05D007920 6.0e-24 115.2 86 66.3
Mapoly0047s0087 Marchantia polymorpha HOM05D006363 ORTHO05D007920 1.8e-20 103.6 148 43.9
Pp3c17_12800 Physcomitrium patens HOM05D006363 ORTHO05D007920 7.1e-17 91.7 144 37.5
Actinidia03116 Actinidia chinensis HOM05D006363 ORTHO05D007920 2.1e-16 90.1 195 40.0
BolC5t32613H Brassica oleracea HOM05D006363 ORTHO05D007920 2.7e-16 89.7 66 66.7
C05p38730 Brassica napus HOM05D006363 ORTHO05D007920 1.0e-15 87.8 66 65.2
TAR633G0106 Trochodendron aralioides HOM05D006363 ORTHO05D007920 6.6e-15 85.1 71 57.7
TAR291G0005 Trochodendron aralioides HOM05D006363 ORTHO05D007920 2.1e-13 80.1 70 57.1
TAR375G0495 Trochodendron aralioides HOM05D006363 ORTHO05D007920 2.1e-13 80.1 70 57.1
TAR614G0003 Trochodendron aralioides HOM05D006363 ORTHO05D007920 2.1e-13 80.1 70 58.6
TAR624G1193 Trochodendron aralioides HOM05D006363 ORTHO05D007920 2.1e-13 80.1 70 57.1
TPR.G33086 Trifolium pratense HOM05D006363 ORTHO05D007920 4.8e-13 79.0 59 71.2
TAR633G1276 Trochodendron aralioides HOM05D006363 ORTHO05D007920 4.8e-13 79.0 70 57.1
TAR383G0849 Trochodendron aralioides HOM05D003653 ORTHO05D004249 1.4e-12 77.4 70 55.7
TAR629G0450 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.8e-12 77.0 70 55.7
BcaC01g06167 Brassica carinata HOM05D006363 ORTHO05D007920 3.4e-11 72.8 45 82.2
BcaC05g27871 Brassica carinata HOM05D006363 ORTHO05D007920 6.4e-10 68.6 95 48.4
Nitab4.5_0006622g0070 Nicotiana tabacum HOM05D006363 ORTHO05D007920 9.6e-06 54.7 38 71.1


User provided reference genes

Program Settings