Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G1198 Fragaria x ananassa HOM05D006186 ORTHO05D009138 3.5e-103 378.3 183 100.0
RcHm_v2.0_Chr1g0354511 Rosa chinensis HOM05D006186 ORTHO05D009138 2.5e-69 265.8 180 71.1
FAN01G2381 Fragaria x ananassa HOM05D006186 ORTHO05D009138 1.4e-64 250.0 153 83.0
FAN09G3194 Fragaria x ananassa HOM05D006186 ORTHO05D009138 3.5e-39 165.6 155 52.9
FAN05G5370 Fragaria x ananassa HOM05D006186 ORTHO05D009138 7.8e-39 164.5 155 52.3
FvH4_7g18893 Fragaria vesca HOM05D006186 ORTHO05D009138 1.5e-37 160.2 155 51.0
FvH4_7g20022 Fragaria vesca HOM05D006186 ORTHO05D009138 2.5e-37 159.5 155 49.7
FvH4_7g20111 Fragaria vesca HOM05D006186 ORTHO05D009138 1.3e-33 147.1 156 50.6
RcHm_v2.0_Chr1g0360131 Rosa chinensis HOM05D006186 ORTHO05D009138 3.9e-30 135.6 186 41.4
RcHm_v2.0_Chr2g0113181 Rosa chinensis HOM05D006186 ORTHO05D009138 5.6e-29 131.7 161 43.5
RcHm_v2.0_Chr1g0365201 Rosa chinensis HOM05D006186 ORTHO05D009138 7.4e-29 131.3 154 44.8
RcHm_v2.0_Chr1g0365181 Rosa chinensis HOM05D006186 ORTHO05D009138 9.6e-29 131.0 184 41.3
MD17G1117300 Malus domestica HOM05D006186 ORTHO05D009138 1.8e-27 126.7 158 44.3
FAN14G5836 Fragaria x ananassa HOM05D006186 ORTHO05D009138 8.4e-25 117.9 146 44.5
FvH4_3g02580 Fragaria vesca HOM05D006186 ORTHO05D009138 1.9e-24 116.7 155 42.6
FAN10G3286 Fragaria x ananassa HOM05D006186 ORTHO05D009138 1.9e-24 116.7 138 47.1
FAN02G0039 Fragaria x ananassa HOM05D006186 ORTHO05D009138 3.2e-24 115.9 115 50.4
RcHm_v2.0_Chr6g0265451 Rosa chinensis HOM05D006186 ORTHO05D009138 5.1e-22 108.6 153 39.9
FAN06G3285 Fragaria x ananassa HOM05D006186 ORTHO05D205872 1.9e-21 106.7 60 88.3
FAN06G4575 Fragaria x ananassa HOM05D006186 ORTHO05D009138 9.6e-21 104.4 153 41.2
FAN06G2274 Fragaria x ananassa HOM05D006186 ORTHO05D009138 2.8e-20 102.8 162 39.5
FvH4_2g06090 Fragaria vesca HOM05D006186 ORTHO05D009138 1.1e-19 100.9 171 36.3
FvH4_3g02591 Fragaria vesca HOM05D006186 ORTHO05D009138 1.1e-19 100.9 155 36.8
FAN01G0654 Fragaria x ananassa HOM05D006186 ORTHO05D009138 1.4e-19 100.5 250 33.2
FAN10G3894 Fragaria x ananassa HOM05D006186 ORTHO05D009138 3.1e-19 99.4 162 38.3
FAN10G0716 Fragaria x ananassa HOM05D006186 ORTHO05D009138 6.9e-19 98.2 162 37.7
FAN10G1081 Fragaria x ananassa HOM05D006186 ORTHO05D009138 6.9e-19 98.2 162 37.7
RcHm_v2.0_Chr2g0096151 Rosa chinensis HOM05D006186 ORTHO05D009138 3.8e-17 92.4 190 36.8
RcHm_v2.0_Chr6g0265471 Rosa chinensis HOM05D006186 ORTHO05D009138 2.5e-16 89.7 109 41.3
RcHm_v2.0_Chr6g0265441 Rosa chinensis HOM05D006186 ORTHO05D009138 4.2e-16 89.0 133 38.3
FAN21G3430 Fragaria x ananassa HOM05D006186 ORTHO05D009138 2.1e-15 86.7 123 39.8
FAN22G1698 Fragaria x ananassa HOM05D006186 ORTHO05D009138 3.5e-15 85.9 160 32.5
RcHm_v2.0_Chr6g0257771 Rosa chinensis HOM05D006186 ORTHO05D009138 4.6e-15 85.5 173 32.9
MD09G1117600 Malus domestica HOM05D006186 ORTHO05D009138 6.0e-15 85.1 157 42.0
RcHm_v2.0_Chr6g0257131 Rosa chinensis HOM05D006186 ORTHO05D009138 1.0e-14 84.3 161 39.1
FAN23G0589 Fragaria x ananassa HOM05D006186 ORTHO05D009138 2.3e-14 83.2 171 34.5
FvH4_1g09331 Fragaria vesca HOM05D006186 ORTHO05D009138 3.0e-14 82.8 169 33.1
FvH4_6g51091 Fragaria vesca HOM05D006186 ORTHO05D009138 3.0e-14 82.8 259 29.0
RcHm_v2.0_Chr4g0442321 Rosa chinensis HOM05D006186 ORTHO05D009138 6.7e-14 81.6 156 35.3
FvH4_4g33210 Fragaria vesca HOM05D006186 ORTHO05D009138 8.7e-14 81.3 162 31.5
FvH4_4g33310 Fragaria vesca HOM05D006186 ORTHO05D009138 8.7e-14 81.3 157 33.8
FAN12G3351 Fragaria x ananassa HOM05D006186 ORTHO05D009138 8.7e-14 81.3 157 33.8
RcHm_v2.0_Chr4g0442821 Rosa chinensis HOM05D006186 ORTHO05D035762 8.7e-14 81.3 179 33.0
FAN22G2351 Fragaria x ananassa HOM05D006186 ORTHO05D009138 1.1e-13 80.9 180 29.4
FAN17G1298 Fragaria x ananassa HOM05D006186 ORTHO05D009138 3.3e-13 79.3 157 33.1
FAN24G3195 Fragaria x ananassa HOM05D006186 ORTHO05D009138 3.7e-12 75.9 88 44.3
FAN03G1763 Fragaria x ananassa HOM05D006186 ORTHO05D009138 4.8e-12 75.5 112 42.9
Prupe.8G124900 Prunus persica HOM05D006186 ORTHO05D009138 1.1e-11 74.3 160 37.5
FvH4_2g05841 Fragaria vesca HOM05D006186 ORTHO05D009138 1.4e-11 73.9 155 33.5
FAN15G1349 Fragaria x ananassa HOM05D006186 ORTHO05D009138 9.0e-11 71.2 155 32.3
FAN19G2487 Fragaria x ananassa HOM05D006186 ORTHO05D009138 9.0e-11 71.2 161 32.9
FAN28G2526 Fragaria x ananassa HOM05D006186 ORTHO05D009138 1.5e-10 70.5 168 36.3
FAN09G3273 Fragaria x ananassa HOM05D006186 ORTHO05D009138 7.7e-10 68.2 181 28.2
FAN14G1648 Fragaria x ananassa HOM05D006186 ORTHO05D009138 1.0e-09 67.8 181 28.7
FvH4_2g06091 Fragaria vesca HOM05D006186 ORTHO05D009138 1.7e-09 67.0 121 38.0
FAN05G1202 Fragaria x ananassa HOM05D006186 ORTHO05D009138 1.1e-08 64.3 121 35.5
FAN05G1748 Fragaria x ananassa HOM05D006186 ORTHO05D009138 1.4e-08 63.9 173 29.5
FAN22G1356 Fragaria x ananassa HOM05D006186 ORTHO05D029358 1.9e-08 63.5 188 30.3
FAN06G5030 Fragaria x ananassa HOM05D006186 ORTHO05D009138 7.2e-08 61.6 88 37.5
FAN20G0553 Fragaria x ananassa HOM05D006186 ORTHO05D009138 7.2e-08 61.6 155 31.6
RcHm_v2.0_Chr4g0442941 Rosa chinensis HOM05D006186 ORTHO05D029544 7.2e-08 61.6 149 32.9
CANSAT80G2743 Cannabis sativa HOM05D000051 ORTHO05D010453 1.6e-07 60.5 191 27.7
FAN09G1945 Fragaria x ananassa HOM05D006186 ORTHO05D009138 4.6e-07 58.9 121 35.5
FAN12G0814 Fragaria x ananassa HOM05D006186 ORTHO05D035762 4.6e-07 58.9 157 30.6
FvH4_1g09661 Fragaria vesca HOM05D006186 ORTHO05D009138 6.7e-06 55.1 142 30.3


User provided reference genes

Program Settings