Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G1138 Fragaria x ananassa HOM05D007785 ORTHO05D008997 4.5e-39 164.1 81 100.0
FvH4_7g07910 Fragaria vesca HOM05D007785 ORTHO05D008997 7.2e-37 156.8 81 96.3
FAN06G1471 Fragaria x ananassa HOM05D007785 ORTHO05D008997 7.2e-37 156.8 81 96.3
FAN10G3075 Fragaria x ananassa HOM05D007785 ORTHO05D008997 7.2e-37 156.8 81 96.3
FAN01G0084 Fragaria x ananassa HOM05D007785 ORTHO05D008997 1.2e-36 156.0 81 95.1
RcHm_v2.0_Chr1g0341401 Rosa chinensis HOM05D007785 ORTHO05D008997 3.5e-31 137.9 81 87.7
MD02G1229100 Malus domestica HOM05D007785 ORTHO05D008997 2.5e-21 105.1 81 70.4
MD07G1083000 Malus domestica HOM05D007785 ORTHO05D008997 6.2e-20 100.5 81 69.1
QL04p025073 Quercus lobata HOM05D007785 ORTHO05D008997 1.1e-16 89.7 86 57.0
CiPaw.13G020000 Carya illinoinensis HOM05D007785 ORTHO05D008997 4.6e-15 84.3 85 56.5
Prupe.2G109900 Prunus persica HOM05D007785 ORTHO05D008997 5.0e-14 80.9 90 54.4
Atru.chr5.15 Acer truncatum HOM05D007785 ORTHO05D008997 1.5e-13 79.3 85 51.8
CSS0006779 Camellia sinensis var. sinensis HOM05D007785 ORTHO05D008997 5.6e-13 77.4 82 51.2
Hma1.2p1_0021F.1_g014470 Hydrangea macrophylla HOM05D007785 ORTHO05D008997 9.5e-13 76.6 87 52.9
Peaxi162Scf01144g00004 Petunia axillaris HOM05D007785 ORTHO05D008997 4.7e-12 74.3 83 50.6
Peaxi162Scf00901g00032 Petunia axillaris HOM05D007785 ORTHO05D008997 6.2e-12 73.9 83 50.6
Sed0022240 Sechium edule HOM05D007785 ORTHO05D008997 6.2e-12 73.9 94 52.1
Actinidia05806 Actinidia chinensis HOM05D007785 ORTHO05D008997 8.1e-12 73.6 83 49.4
Nn1g00585 Nelumbo nucifera HOM05D007785 ORTHO05D008997 1.1e-11 73.2 85 48.2
Haze_02930 Corylus avellana HOM05D007785 ORTHO05D008997 2.3e-11 72.0 78 56.4
Nitab4.5_0001476g0130 Nicotiana tabacum HOM05D007785 ORTHO05D008997 2.3e-11 72.0 85 50.6
Hma1.2p1_0601F.1_g187290 Hydrangea macrophylla HOM05D007785 ORTHO05D008997 6.8e-11 70.5 81 50.6
Dinv43998 Davidia involucrata HOM05D007785 ORTHO05D008997 8.9e-11 70.1 66 56.1
Prupe.2G110100 Prunus persica HOM05D007785 ORTHO05D008997 8.9e-11 70.1 66 63.6
Nitab4.5_0003887g0040 Nicotiana tabacum HOM05D007785 ORTHO05D008997 1.2e-10 69.7 66 57.6
Cc02_g26020 Coffea canephora HOM05D007785 ORTHO05D008997 2.0e-10 68.9 81 48.1
ClCG05G002700 Citrullus lanatus HOM05D007785 ORTHO05D008997 2.6e-10 68.6 96 49.0
MSTRG.17094 Avicennia marina HOM05D007785 ORTHO05D008997 3.4e-10 68.2 81 43.2
Gohir.D13G012700 Gossypium hirsutum HOM05D007785 ORTHO05D008997 5.8e-10 67.4 80 51.2
TAR636G3686 Trochodendron aralioides HOM05D007785 ORTHO05D008997 7.5e-10 67.0 85 43.5
Gohir.A13G011800 Gossypium hirsutum HOM05D007785 ORTHO05D008997 9.9e-10 66.6 80 51.2
Gorai.013G013800 Gossypium raimondii HOM05D007785 ORTHO05D008997 9.9e-10 66.6 80 51.2
Solyc01g080890.2 Solanum lycopersicum HOM05D007785 ORTHO05D008997 1.3e-09 66.2 85 50.6
Sopen01g032480 Solanum pennellii HOM05D007785 ORTHO05D008997 2.2e-09 65.5 85 51.8
TAR374G0344 Trochodendron aralioides HOM05D007785 ORTHO05D008997 2.2e-09 65.5 77 46.8
Nitab4.5_0006705g0010 Nicotiana tabacum HOM05D007785 ORTHO05D008997 4.9e-09 64.3 66 60.6
Nitab4.5_0000166g0090 Nicotiana tabacum HOM05D007785 ORTHO05D008997 6.4e-09 63.9 66 59.1
CsaV3_3G010180 Cucumis sativus L. HOM05D007785 ORTHO05D008997 2.4e-08 62.0 96 44.8
Migut.B01462 Erythranthe guttata HOM05D007785 ORTHO05D008997 2.4e-08 62.0 81 43.2
TAR375G1071 Trochodendron aralioides HOM05D007785 ORTHO05D008997 3.2e-08 61.6 71 49.3
MELO3C006238.2 Cucumis melo HOM05D007785 ORTHO05D008997 4.1e-08 61.2 88 45.5
PGSC0003DMG400001700 Solanum tuberosum HOM05D007785 ORTHO05D008997 4.1e-08 61.2 85 49.4
Sed0016926 Sechium edule HOM05D007785 ORTHO05D008997 5.4e-08 60.8 77 49.4
SalBow4G1855 Salvia bowleyana HOM05D007785 ORTHO05D008997 9.2e-08 60.1 79 45.6
Nn6g33639 Nelumbo nucifera HOM05D007785 ORTHO05D008997 1.6e-07 59.3 71 46.5
SalBow5G3019 Salvia bowleyana HOM05D007785 ORTHO05D008997 2.7e-07 58.5 81 44.4
Ciclev10023085m.g Citrus clementina HOM05D007785 ORTHO05D008997 6.0e-07 57.4 67 50.7
Oeu021958.1 Olea europaea HOM05D007785 ORTHO05D008997 6.0e-07 57.4 80 42.5
CSS0013282 Camellia sinensis var. sinensis HOM05D007785 ORTHO05D008997 1.0e-06 56.6 81 45.7
Lalb_Chr09g0329531 Lupinus albus HOM05D007785 ORTHO05D008997 1.3e-06 56.2 65 49.2
Cc08_g02350 Coffea canephora HOM05D007785 ORTHO05D008997 1.7e-06 55.8 72 50.0
Manes.15G169900 Manihot esculenta HOM05D007785 ORTHO05D008997 3.9e-06 54.7 76 46.1
ECA234G3743 Erigeron canadensis HOM05D007785 ORTHO05D008997 6.6e-06 53.9 72 44.4
Rhsim01G0145700 Rhododendron simsii HOM05D007785 ORTHO05D008997 6.6e-06 53.9 76 47.4


User provided reference genes

Program Settings