Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G1123 Fragaria x ananassa HOM05D006438 ORTHO05D007998 0.0e+00 1246.9 652 100.0
FAN10G0107 Fragaria x ananassa HOM05D006438 ORTHO05D007998 0.0e+00 1176.0 652 94.5
FvH4_7g16650 Fragaria vesca HOM05D006438 ORTHO05D007998 0.0e+00 1175.6 652 95.4
FAN10G3447 Fragaria x ananassa HOM05D006438 ORTHO05D007998 0.0e+00 1175.2 650 94.6
FAN01G1234 Fragaria x ananassa HOM05D006438 ORTHO05D007998 0.0e+00 1134.4 652 91.9
RcHm_v2.0_Chr1g0359811 Rosa chinensis HOM05D006438 ORTHO05D007998 0.0e+00 1125.5 664 90.7
Prupe.2G189300 Prunus persica HOM05D006438 ORTHO05D007998 1.4e-276 956.1 652 77.5
MD07G1150500 Malus domestica HOM05D006438 ORTHO05D007998 1.4e-260 902.9 652 74.2
MD01G1082100 Malus domestica HOM05D006438 ORTHO05D007998 5.8e-254 880.9 658 72.5
CiPaw.02G041100 Carya illinoinensis HOM05D006438 ORTHO05D007998 2.0e-246 855.9 646 70.6
Dinv32596 Davidia involucrata HOM05D006438 ORTHO05D007998 7.9e-243 844.0 652 68.9
QL11p022848 Quercus lobata HOM05D006438 ORTHO05D007998 1.0e-242 843.6 652 68.4
QL06p050047 Quercus lobata HOM05D006438 ORTHO05D007998 5.7e-241 837.8 652 68.4
Lj7A500T115 Lonicera japonica HOM05D006438 ORTHO05D007998 1.1e-236 823.5 659 66.5
Cfa003796 Carpinus fangiana HOM05D006438 ORTHO05D007998 2.5e-236 822.4 654 68.3
Haze_15664 Corylus avellana HOM05D006438 ORTHO05D007998 9.4e-236 820.5 654 68.0
Manes.13G078900 Manihot esculenta HOM05D006438 ORTHO05D007998 2.6e-230 802.4 651 66.5
Actinidia20246 Actinidia chinensis HOM05D006438 ORTHO05D007998 5.0e-229 798.1 652 66.6
CANSAT56G2224 Cannabis sativa HOM05D006438 ORTHO05D007998 4.2e-228 795.0 655 66.1
vmacro13165 Vaccinium macrocarpon HOM05D006438 ORTHO05D007998 5.5e-228 794.7 655 67.2
MSTRG.17348 Avicennia marina HOM05D006438 ORTHO05D007998 9.4e-228 793.9 662 64.4
TWI59G0942 Tripterygium wilfordii HOM05D006438 ORTHO05D007998 1.2e-227 793.5 658 66.1
CSS0017951 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 3.6e-227 792.0 652 66.6
CSS0029538 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 5.2e-226 788.1 652 66.3
DCAR_005393 Daucus carota HOM05D006438 ORTHO05D007998 8.8e-226 787.3 650 65.4
Duzib138G1266 Durio zibethinus HOM05D006438 ORTHO05D007998 5.7e-225 784.6 679 63.2
Ciclev10019221m.g Citrus clementina HOM05D006438 ORTHO05D007998 7.4e-225 784.3 664 65.1
Potri.002G171600 Populus trichocarpa HOM05D006438 ORTHO05D007998 7.4e-225 784.3 653 65.5
GSVIVG01027157001 Vitis vinifera HOM05D006438 ORTHO05D007998 6.3e-224 781.2 656 65.4
Gohir.A08G125100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 1.8e-223 779.6 665 64.4
Lj1g0004073 Lotus japonicus HOM05D006438 ORTHO05D007998 5.3e-223 778.1 658 64.7
Hund27192 Selenicereus undatus HOM05D006438 ORTHO05D007998 3.5e-222 775.4 677 62.8
Thecc.01G341800 Theobroma cacao HOM05D006438 ORTHO05D007998 4.5e-222 775.0 666 63.4
Manes.13G077643 Manihot esculenta HOM05D006438 ORTHO05D007998 2.9e-221 772.3 651 64.8
Migut.B01878 Erythranthe guttata HOM05D006438 ORTHO05D007998 4.2e-220 768.5 664 62.8
Phvul.006G113600 Phaseolus vulgaris HOM05D006438 ORTHO05D007998 9.4e-220 767.3 655 63.5
Sabra14G0072800 Salix brachista HOM05D006438 ORTHO05D007998 2.1e-219 766.1 658 64.3
Rhsim07G0003900 Rhododendron simsii HOM05D006438 ORTHO05D007998 4.7e-219 765.0 645 66.4
SalBow3G2635 Salvia bowleyana HOM05D006438 ORTHO05D007998 6.1e-219 764.6 648 63.1
Glyma.03G257800 Glycine max HOM05D006438 ORTHO05D007998 4.0e-218 761.9 657 64.7
Glyma.19G256300 Glycine max HOM05D006438 ORTHO05D007998 6.8e-218 761.1 656 64.2
Sc23g0002070 Simmondsia chinensis HOM05D006438 ORTHO05D007998 1.5e-217 760.0 675 61.0
PGSC0003DMG400000230 Solanum tuberosum HOM05D006438 ORTHO05D007998 3.4e-217 758.8 671 62.1
Gorai.004G151600 Gossypium raimondii HOM05D006438 ORTHO05D007998 7.5e-217 757.7 656 63.7
Gohir.D08G146100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 9.8e-217 757.3 656 63.4
Cpa.g.sc96.25 Carica papaya HOM05D006438 ORTHO05D007998 1.3e-216 756.9 656 64.0
Lalb_Chr18g0044491 Lupinus albus HOM05D006438 ORTHO05D007998 1.7e-216 756.5 659 64.3
Nn3g18981 Nelumbo nucifera HOM05D006438 ORTHO05D007998 6.3e-216 754.6 650 63.4
SGA_v2.0_scaffold5G03022 Striga asiatica HOM05D006438 ORTHO05D007998 6.3e-216 754.6 660 62.3
Sopen01g039750 Solanum pennellii HOM05D006438 ORTHO05D007998 5.4e-215 751.5 671 61.5
Ca_09510_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 1.2e-214 750.4 655 62.6
Ca_30059_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 1.2e-214 750.4 655 62.6
Solyc01g096030.4 Solanum lycopersicum HOM05D006438 ORTHO05D007998 1.7e-213 746.5 671 61.5
Peaxi162Scf00786g00012 Petunia axillaris HOM05D006438 ORTHO05D007998 2.2e-213 746.1 659 62.2
VMungo0540G1767 Vigna mungo HOM05D006438 ORTHO05D007998 2.9e-213 745.7 655 61.7
CAN.G1415.26 Capsicum annuum HOM05D006438 ORTHO05D007998 3.8e-213 745.3 661 62.5
PSO170G3726 Papaver somniferum HOM05D006438 ORTHO05D007998 2.5e-212 742.7 654 60.6
EL10Ac1g00261 Beta vulgaris HOM05D006438 ORTHO05D007998 2.7e-211 739.2 673 60.5
Eucgr.A01924 Eucalyptus grandis HOM05D006438 ORTHO05D007998 3.0e-210 735.7 655 61.8
PSO063G1116 Papaver somniferum HOM05D006438 ORTHO05D007998 7.5e-209 731.1 656 60.5
Nitab4.5_0000172g0480 Nicotiana tabacum HOM05D006438 ORTHO05D007998 2.2e-208 729.6 662 61.3
Ah.05g179490 Amaranthus hybridus HOM05D006438 ORTHO05D007998 2.8e-208 729.2 671 60.2
Nitab4.5_0013402g0010 Nicotiana tabacum HOM05D006438 ORTHO05D007998 2.8e-208 729.2 660 61.1
AUR62023453 Chenopodium quinoa HOM05D006438 ORTHO05D007998 8.3e-208 727.6 673 60.0
Nn1g00253 Nelumbo nucifera HOM05D006438 ORTHO05D007998 1.6e-206 723.4 648 61.6
TPR.G4682 Trifolium pratense HOM05D006438 ORTHO05D007998 2.9e-205 719.2 627 62.4
arahy.Tifrunner.gnm1.ann1.TZA1ET Arachis hypogaea HOM05D006438 ORTHO05D007998 1.0e-202 710.7 636 61.5
Psat3g002440 Pisum sativum HOM05D006438 ORTHO05D007998 3.0e-202 709.1 658 60.2
ClCG06G001260 Citrullus lanatus HOM05D006438 ORTHO05D007998 4.0e-202 708.8 656 59.6
arahy.Tifrunner.gnm1.ann1.QN4XTT Arachis hypogaea HOM05D006438 ORTHO05D007998 5.2e-202 708.4 638 61.3
MELO3C022408.2 Cucumis melo HOM05D006438 ORTHO05D007998 1.4e-199 700.3 661 60.1
Medtr7g117420 Medicago truncatula HOM05D006438 ORTHO05D007998 1.6e-198 696.8 626 60.9
Aqoxy5G04279 Aquilegia oxysepala HOM05D006438 ORTHO05D007998 3.5e-198 695.7 651 58.5
PGR031G2090 Punica granatum HOM05D006438 ORTHO05D007998 5.9e-198 694.9 659 59.6
THA.LOC104817364 Tarenaya hassleriana HOM05D006438 ORTHO05D007998 7.8e-198 694.5 684 58.9
ECA236G2598 Erigeron canadensis HOM05D006438 ORTHO05D007998 2.3e-197 693.0 646 60.2
COL.COLO4_06280 Corchorus olitorius HOM05D006438 ORTHO05D007998 2.9e-197 692.6 605 62.3
CsaV3_6G007190 Cucumis sativus L. HOM05D006438 ORTHO05D007998 1.5e-196 690.3 659 59.5
Potri.014G099300 Populus trichocarpa HOM05D006438 ORTHO05D007998 6.8e-194 681.4 580 64.3
HanXRQChr04g0120541 Helianthus annuus HOM05D006438 ORTHO05D007998 7.0e-191 671.4 654 58.7
MBI07_g40678_MAGBIO Magnolia biondii HOM05D006438 ORTHO05D007998 1.1e-188 664.1 662 55.0
Sed0005284 Sechium edule HOM05D006438 ORTHO05D007998 3.3e-188 662.5 646 58.4
Aa31LG10G15790 Aethionema arabicum HOM05D006438 ORTHO05D007998 4.0e-186 655.6 660 57.4
AL5G44360 Arabidopsis lyrata HOM05D006438 ORTHO05D007998 5.2e-186 655.2 684 55.6
Thhalv10005821m.g Eutrema salsugineum HOM05D006438 ORTHO05D007998 1.3e-184 650.6 684 54.2
Sp5g01570 Schrenkiella parvula HOM05D006438 ORTHO05D007998 7.1e-183 644.8 684 54.1
Lsat_1_v5_gn_7_1020 Lactuca sativa HOM05D006438 ORTHO05D007998 8.6e-181 637.9 658 56.5
BolC6t37959H Brassica oleracea HOM05D006438 ORTHO05D007998 2.5e-180 636.3 679 54.3
AT3G61800 Arabidopsis thaliana HOM05D006438 ORTHO05D007998 2.8e-179 632.9 684 53.2
BraA07t30216Z Brassica rapa HOM05D006438 ORTHO05D007998 1.1e-178 630.9 683 53.7
A07p25760 Brassica napus HOM05D006438 ORTHO05D007998 2.3e-178 629.8 683 53.6
ATR0602G124 Amborella trichopoda HOM05D006438 ORTHO05D007998 6.8e-178 628.2 679 53.6
AUR62004500 Chenopodium quinoa HOM05D006438 ORTHO05D007998 8.9e-178 627.9 661 55.1
Carub.0005s2854 Capsella rubella HOM05D006438 ORTHO05D007998 3.4e-177 625.9 683 52.9
C06p27980 Brassica napus HOM05D006438 ORTHO05D007998 9.9e-177 624.4 679 53.2
CARHR172130 Cardamine hirsuta HOM05D006438 ORTHO05D007998 1.7e-176 623.6 692 52.9
unitig_37.g12626 Utricularia gibba HOM05D006438 ORTHO05D007998 6.0e-174 615.1 615 56.3
HPP92_008818 Vanilla planifolia HOM05D006438 ORTHO05D007998 1.1e-170 604.4 678 51.3
Actinidia10144 Actinidia chinensis HOM05D006438 ORTHO05D007998 6.6e-165 585.1 472 65.0
SEGI_11798 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 2.1e-134 483.8 701 43.1
Dinv35119 Davidia involucrata HOM05D006438 ORTHO05D007998 4.3e-132 476.1 653 46.9
Mapoly0002s0048 Marchantia polymorpha HOM05D006438 ORTHO05D007998 1.5e-129 467.6 678 43.2
BcaC08g45166 Brassica carinata HOM05D006438 ORTHO05D007998 3.4e-129 466.5 561 49.0
Zm00001eb378420 Zea mays HOM05D006438 ORTHO05D007998 2.9e-128 463.4 629 46.4
Pp3c3_31410 Physcomitrium patens HOM05D006438 ORTHO05D007998 4.5e-121 439.5 695 39.4
SMO365G0083 Selaginella moellendorffii HOM05D006438 ORTHO05D007998 4.5e-121 439.5 653 40.6
Atru.chr5.676 Acer truncatum HOM05D006438 ORTHO05D007998 1.3e-115 421.4 311 74.0
Cc10_g13840 Coffea canephora HOM05D006438 ORTHO05D007998 9.1e-114 415.2 384 60.4
SHI13317 Sapria himalayana HOM05D006438 ORTHO05D007998 1.9e-103 380.9 347 59.1
BcaC08g45168 Brassica carinata HOM05D006438 ORTHO05D007998 1.8e-98 364.4 320 62.2
CDE08G0794 Ceratophyllum demersum HOM05D006438 ORTHO05D007998 7.0e-98 362.5 350 55.4
Atru.chr5.675 Acer truncatum HOM05D006438 ORTHO05D007998 7.0e-82 309.3 244 67.2
AagrBONN_evm.TU.Sc2ySwM_368.299 Anthoceros agrestis HOM05D006438 ORTHO05D007998 6.4e-75 286.2 621 33.5
BcaC08g45167 Brassica carinata HOM05D006438 ORTHO05D007998 1.3e-59 235.3 254 54.7
C08p42400 Brassica napus HOM05D006438 ORTHO05D007998 6.6e-48 196.4 323 40.2
BraA06t25827Z Brassica rapa HOM05D006438 ORTHO05D007998 1.3e-46 192.2 260 45.0
SEGI_17110 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 1.7e-43 181.8 225 43.1
Sabra02G0141200 Salix brachista HOM05D006438 ORTHO05D007998 1.4e-29 135.6 359 30.9
SEGI_37113 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 1.9e-18 98.6 180 33.9
Zm00001eb167390 Zea mays HOM05D006438 ORTHO05D007998 9.1e-13 79.7 87 51.7
Aa31sc496G10 Aethionema arabicum HOM05D006438 ORTHO05D007998 3.3e-07 61.2 123 41.5


User provided reference genes

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