Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G1005 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.0e-106 387.5 193 100.0
FAN01G2106 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-91 340.1 213 85.0
FAN10G2587 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.8e-54 216.5 197 63.5
FAN01G0062 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.8e-49 197.6 187 62.6
FAN03G3164 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.0e-45 186.4 101 91.1
FAN10G3741 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-41 174.1 197 55.3
FvH4_7g30140 Fragaria vesca HOM05D002813 ORTHO05D003203 3.5e-37 159.1 112 74.1
FAN06G4596 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.5e-37 159.1 112 74.1
FvH4_5g12200 Fragaria vesca HOM05D002813 ORTHO05D003203 5.5e-35 151.8 204 47.5
FAN16G0815 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.4e-32 142.5 204 46.1
FAN25G1955 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.7e-32 141.7 204 45.6
FAN04G1781 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.5e-32 141.4 207 44.9
FvH4_2g37241 Fragaria vesca HOM05D002813 ORTHO05D003203 2.8e-31 139.4 207 44.9
FvH4_3g40700 Fragaria vesca HOM05D002813 ORTHO05D003203 3.7e-31 139.0 204 45.1
FAN11G0908 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.3e-31 138.3 204 45.1
FAN04G3192 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.3e-31 137.9 206 45.1
FvH4_3g00150 Fragaria vesca HOM05D002813 ORTHO05D003203 1.8e-30 136.7 207 44.4
FvH4_5g10370 Fragaria vesca HOM05D002813 ORTHO05D003203 3.2e-30 136.0 200 45.0
FAN18G2715 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.0e-28 128.6 211 42.2
FvH4_7g29850 Fragaria vesca HOM05D002813 ORTHO05D003203 7.3e-27 124.8 207 44.0
FAN06G0128 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.3e-27 124.8 207 44.0
FAN14G5169 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.3e-27 124.8 207 44.0
FvH4_3g11280 Fragaria vesca HOM05D002813 ORTHO05D003203 9.5e-27 124.4 181 45.9
FAN02G0699 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-26 124.0 207 43.5
FAN06G0370 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-26 124.0 207 43.5
FAN25G2464 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-26 124.0 207 43.5
FvH4_7g07300 Fragaria vesca HOM05D002813 ORTHO05D003203 4.7e-26 122.1 198 42.4
FAN18G2625 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.7e-26 122.1 211 40.8
FAN27G1742 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.0e-26 121.3 207 41.1
FAN06G2359 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.8e-25 120.2 207 41.5
FAN21G1994 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.4e-24 115.9 190 43.7
FAN21G2238 Fragaria x ananassa HOM05D000437 ORTHO05D003203 3.4e-24 115.9 190 43.7
FAN13G3008 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-23 113.6 201 40.3
RcHm_v2.0_Chr5g0073471 Rosa chinensis HOM05D002813 ORTHO05D003203 6.4e-23 111.7 230 37.8
FAN15G2356 Fragaria x ananassa HOM05D002813 ORTHO05D000003 8.3e-23 111.3 207 37.2
FvH4_5g12180 Fragaria vesca HOM05D002813 ORTHO05D003203 1.1e-22 110.9 180 41.1
FAN06G4693 Fragaria x ananassa HOM05D000201 ORTHO05D007118 1.1e-22 110.9 212 37.3
FAN06G2895 Fragaria x ananassa HOM05D000201 ORTHO05D007118 2.4e-22 109.8 212 36.8
FAN18G4406 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.2e-22 109.4 199 38.7
FAN21G0510 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.2e-22 109.4 207 39.1
FAN08G1174 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-21 107.5 193 38.9
FvH4_5g12190 Fragaria vesca HOM05D002813 ORTHO05D003203 2.0e-21 106.7 175 42.9
Prupe.1G448200 Prunus persica HOM05D002813 ORTHO05D003203 3.5e-21 105.9 208 36.1
RcHm_v2.0_Chr7g0185401 Rosa chinensis HOM05D002813 ORTHO05D003203 3.5e-21 105.9 193 38.9
FvH4_5g12160 Fragaria vesca HOM05D002813 ORTHO05D003203 1.0e-20 104.4 193 38.3
FvH4_5g12210 Fragaria vesca HOM05D002813 ORTHO05D003203 1.0e-20 104.4 156 42.3
RcHm_v2.0_Chr6g0307031 Rosa chinensis HOM05D002813 ORTHO05D003203 1.0e-20 104.4 204 38.7
FAN04G2105 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.3e-20 103.2 193 38.3
FAN13G2791 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.0e-20 102.8 193 38.3
RcHm_v2.0_Chr2g0157391 Rosa chinensis HOM05D002813 ORTHO05D003203 6.6e-20 101.7 202 37.1
Atru.chr7.2088 Acer truncatum HOM05D002813 ORTHO05D003203 1.1e-19 100.9 206 35.9
FAN18G4233 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.5e-19 100.5 200 39.5
Dinv27902 Davidia involucrata HOM05D002813 ORTHO05D003203 2.5e-19 99.8 214 36.4
QL12p041358 Quercus lobata HOM05D002813 ORTHO05D003203 4.3e-19 99.0 213 35.2
QL12p041353 Quercus lobata HOM05D002813 ORTHO05D003203 5.6e-19 98.6 213 34.7
FAN15G1653 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.5e-19 97.8 207 35.3
Sc23g0005220 Simmondsia chinensis HOM05D002813 ORTHO05D003203 9.5e-19 97.8 210 32.4
Actinidia14674 Actinidia chinensis HOM05D002813 ORTHO05D003203 1.2e-18 97.4 210 36.7
FvH4_2g34980 Fragaria vesca HOM05D002813 ORTHO05D003203 2.1e-18 96.7 207 35.7
FAN08G0206 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.8e-18 96.3 128 43.8
FAN20G2873 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.7e-18 95.5 207 34.8
FAN01G2630 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.2e-18 95.1 198 36.9
CSS0022259 Camellia sinensis var. sinensis HOM05D002813 ORTHO05D003203 1.1e-17 94.4 166 40.4
FAN13G0724 Fragaria x ananassa HOM05D001362 ORTHO05D001310 1.1e-17 94.4 200 37.0
FAN27G2509 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-17 94.0 207 34.8
FAN20G1057 Fragaria x ananassa HOM05D002813 ORTHO05D000003 1.8e-17 93.6 207 35.3
FAN04G3253 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.3e-17 93.2 177 39.5
RcHm_v2.0_Chr7g0185371 Rosa chinensis HOM05D002813 ORTHO05D003203 2.3e-17 93.2 173 38.7
FvH4_5g12240 Fragaria vesca HOM05D002813 ORTHO05D003203 5.2e-17 92.0 199 36.7
FAN02G4209 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.9e-17 91.3 159 42.8
FAN18G0957 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.5e-16 90.5 115 46.1
QL12p041348 Quercus lobata HOM05D002813 ORTHO05D003203 1.5e-16 90.5 205 37.1
GSVIVG01035624001 Vitis vinifera HOM05D002813 ORTHO05D003203 2.6e-16 89.7 201 36.8
FvH4_7g18342 Fragaria vesca HOM05D002813 ORTHO05D003203 5.8e-16 88.6 194 36.6
FAN15G1989 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.8e-16 88.6 204 36.3
FvH4_7g30123 Fragaria vesca HOM05D002813 ORTHO05D003203 7.5e-16 88.2 78 60.3
FvH4_1g05120 Fragaria vesca HOM05D002813 ORTHO05D003203 1.7e-15 87.0 208 34.1
FAN02G4465 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-15 87.0 204 33.8
FAN19G0454 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-15 87.0 208 34.1
TAR626G1934 Trochodendron aralioides HOM05D002813 ORTHO05D003203 1.7e-15 87.0 215 33.0
Gohir.D05G048500 Gossypium hirsutum HOM05D002813 ORTHO05D003203 2.2e-15 86.7 207 32.4
FvH4_2g32590 Fragaria vesca HOM05D002813 ORTHO05D003203 2.9e-15 86.3 207 37.7
FAN24G0821 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.9e-15 86.3 207 37.7
Gorai.009G049800 Gossypium raimondii HOM05D002813 ORTHO05D003203 3.7e-15 85.9 207 31.9
CiPaw.07G204200 Carya illinoinensis HOM05D002813 ORTHO05D003203 4.9e-15 85.5 211 33.2
FvH4_2g35000 Fragaria vesca HOM05D002813 ORTHO05D003203 6.4e-15 85.1 202 36.6
FvH4_5g09361 Fragaria vesca HOM05D002813 ORTHO05D003203 1.1e-14 84.3 200 35.5
SEGI_38686 Sequoiadendron giganteum HOM05D002813 ORTHO05D003203 1.1e-14 84.3 208 29.3
FvH4_2g32610 Fragaria vesca HOM05D002813 ORTHO05D003203 1.4e-14 84.0 202 34.7
FAN15G1401 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-14 84.0 205 36.6
FAN20G2926 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.9e-14 83.6 207 37.2
FAN15G0916 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.1e-14 82.4 201 35.3
FAN27G1144 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.1e-14 82.4 201 35.3
Gohir.A05G046700 Gossypium hirsutum HOM05D002813 ORTHO05D003203 4.1e-14 82.4 207 31.4
FAN13G0265 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.1e-14 81.6 173 39.9
FAN18G0945 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.1e-14 81.6 157 38.9
RcHm_v2.0_Chr6g0307021 Rosa chinensis HOM05D002813 ORTHO05D003203 7.1e-14 81.6 215 34.4
FAN24G2983 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-13 80.9 177 37.9
Potri.006G238300 Populus trichocarpa HOM05D002813 ORTHO05D003203 1.2e-13 80.9 219 32.4
FAN21G1333 Fragaria x ananassa HOM05D000259 ORTHO05D008185 2.1e-13 80.1 180 35.6
Duzib168G2404 Durio zibethinus HOM05D002813 ORTHO05D003203 2.7e-13 79.7 214 31.3
FvH4_6g41671 Fragaria vesca HOM05D002813 ORTHO05D003203 2.7e-13 79.7 204 32.8
FAN06G1567 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.0e-13 78.6 201 35.3
FAN15G3400 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.0e-13 78.6 213 32.9
Manes.16G075500 Manihot esculenta HOM05D002813 ORTHO05D003203 6.0e-13 78.6 217 30.4
FAN20G0435 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.8e-13 78.2 213 33.3
FAN04G1334 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-12 77.8 142 37.3
Nn2g11622 Nelumbo nucifera HOM05D002813 ORTHO05D003203 1.0e-12 77.8 147 37.4
FvH4_2g32630 Fragaria vesca HOM05D002813 ORTHO05D003203 1.3e-12 77.4 204 32.8
FAN24G2117 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.3e-12 76.6 203 33.0
FAN25G3196 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.3e-12 76.6 127 41.7
MD15G1093400 Malus domestica HOM05D002813 ORTHO05D003203 2.3e-12 76.6 208 30.3
FvH4_2g32520 Fragaria vesca HOM05D002813 ORTHO05D003203 3.0e-12 76.3 203 33.0
Sopen08g020490 Solanum pennellii HOM05D002813 ORTHO05D003203 3.0e-12 76.3 209 31.6
FvH4_5g12191 Fragaria vesca HOM05D002813 ORTHO05D003203 3.9e-12 75.9 183 35.5
Nitab4.5_0003794g0040 Nicotiana tabacum HOM05D002813 ORTHO05D003203 8.6e-12 74.7 181 33.7
FAN09G1205 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-11 74.3 179 34.1
FAN25G3517 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-11 74.3 164 37.2
PGSC0003DMG400002228 Solanum tuberosum HOM05D002813 ORTHO05D003203 1.5e-11 73.9 181 34.3
Eucgr.C02935 Eucalyptus grandis HOM05D002813 ORTHO05D003203 2.5e-11 73.2 215 28.8
FvH4_2g32530 Fragaria vesca HOM05D002813 ORTHO05D003203 2.5e-11 73.2 213 32.9
FvH4_3g11250 Fragaria vesca HOM05D002813 ORTHO05D003203 2.5e-11 73.2 127 39.4
FAN27G0414 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.3e-11 72.8 213 32.9
Nitab4.5_0028416g0010 Nicotiana tabacum HOM05D002813 ORTHO05D003203 7.3e-11 71.6 181 33.7
FAN28G0350 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-10 70.9 168 35.1
FAN18G3812 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.6e-10 70.5 117 41.0
FvH4_2g32540 Fragaria vesca HOM05D002813 ORTHO05D003203 2.1e-10 70.1 206 31.6
FAN18G3569 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.2e-10 68.6 131 33.6
MSTRG.9106 Avicennia marina HOM05D002813 ORTHO05D003203 8.1e-10 68.2 210 27.6
FAN27G1770 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.1e-10 68.2 209 32.5
ATR0705G192 Amborella trichopoda HOM05D002813 ORTHO05D003203 1.8e-09 67.0 213 29.6
FAN15G1647 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.2e-09 65.5 187 33.2
FvH4_2g34990 Fragaria vesca HOM05D002813 ORTHO05D003203 6.8e-09 65.1 213 30.0
FAN14G4978 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-08 64.3 193 32.1
SGA_v2.0_scaffold103G30003 Striga asiatica HOM05D002813 ORTHO05D003203 1.2e-08 64.3 214 27.6
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 1.5e-08 63.9 134 33.6
Mapoly0100s0050 Marchantia polymorpha HOM05D002813 ORTHO05D003203 1.5e-08 63.9 182 28.0
FAN05G4830 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.2e-07 60.1 124 36.3
FAN18G0728 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.2e-07 60.1 157 32.5
FAN22G0648 Fragaria x ananassa HOM05D002762 ORTHO05D004643 2.2e-07 60.1 165 30.3
FAN17G2967 Fragaria x ananassa HOM05D002762 ORTHO05D004643 2.9e-07 59.7 165 30.3
FvH4_6g15310 Fragaria vesca HOM05D002813 ORTHO05D003203 3.7e-07 59.3 154 33.8
FAN14G0433 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.7e-07 59.3 156 35.9
FAN14G2467 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.7e-07 59.3 124 35.5
FAN09G1014 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.4e-07 58.2 154 33.8
SEGI_37199 Sequoiadendron giganteum HOM05D002813 ORTHO05D003203 1.1e-06 57.8 153 27.5
FvH4_4g14060 Fragaria vesca HOM05D002762 ORTHO05D004643 1.4e-06 57.4 165 30.3
SEGI_20328 Sequoiadendron giganteum HOM05D002813 ORTHO05D003203 1.4e-06 57.4 150 29.3
FAN11G2625 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.4e-06 56.6 134 35.1
FAN12G3553 Fragaria x ananassa HOM05D002762 ORTHO05D004643 2.4e-06 56.6 165 29.1
FAN25G0311 Fragaria x ananassa HOM05D000808 ORTHO05D000863 2.4e-06 56.6 77 45.5
Glyma.17G019800 Glycine max HOM05D002762 ORTHO05D004643 2.4e-06 56.6 161 30.4
arahy.Tifrunner.gnm1.ann1.6S26PP Arachis hypogaea HOM05D002762 ORTHO05D004643 3.2e-06 56.2 173 30.6
FAN05G0887 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.2e-06 56.2 154 33.1
BcaB06g28063 Brassica carinata HOM05D001818 ORTHO05D001780 4.1e-06 55.8 161 30.4
RcHm_v2.0_Chr4g0419291 Rosa chinensis HOM05D002762 ORTHO05D004643 4.1e-06 55.8 159 29.6
Sp4g04780 Schrenkiella parvula HOM05D001818 ORTHO05D001780 4.1e-06 55.8 161 27.3
FAN21G0006 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.4e-06 55.5 154 37.0
SMO228G0132 Selaginella moellendorffii HOM05D002762 ORTHO05D004643 5.4e-06 55.5 126 30.2
arahy.Tifrunner.gnm1.ann1.Q6K1JG Arachis hypogaea HOM05D002762 ORTHO05D004643 7.1e-06 55.1 173 30.6
Cc08_g09560 Coffea canephora HOM05D002813 ORTHO05D003203 9.2e-06 54.7 208 26.9
RcHm_v2.0_Chr3g0468781 Rosa chinensis HOM05D002813 ORTHO05D003203 9.2e-06 54.7 47 53.2


User provided reference genes

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