Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G0846 Fragaria x ananassa HOM05D004660 ORTHO05D005474 2.3e-84 315.5 150 100.0
FAN10G1296 Fragaria x ananassa HOM05D004660 ORTHO05D005474 3.0e-76 288.5 140 97.9
FAN10G4080 Fragaria x ananassa HOM05D004660 ORTHO05D005474 3.0e-76 288.5 140 97.9
FvH4_7g33300 Fragaria vesca HOM05D004660 ORTHO05D005474 2.5e-75 285.4 140 96.4
FAN01G2536 Fragaria x ananassa HOM05D004660 ORTHO05D005474 4.3e-75 284.6 140 96.4
RcHm_v2.0_Chr1g0383281 Rosa chinensis HOM05D004660 ORTHO05D005474 1.8e-73 279.3 141 95.7
Prupe.2G321900 Prunus persica HOM05D004660 ORTHO05D005474 3.0e-68 261.9 140 88.6
MD01G1231200 Malus domestica HOM05D004660 ORTHO05D005474 5.2e-65 251.1 140 85.0
Cpa.g.sc3.184 Carica papaya HOM05D004660 ORTHO05D005474 1.7e-63 246.1 140 80.7
QL09p006015 Quercus lobata HOM05D004660 ORTHO05D005474 1.2e-61 240.0 141 80.9
ClCG07G009740 Citrullus lanatus HOM05D004660 ORTHO05D005474 4.6e-61 238.0 140 75.7
Duzib205G1429 Durio zibethinus HOM05D004660 ORTHO05D005474 4.6e-61 238.0 141 77.3
Sed0002848 Sechium edule HOM05D004660 ORTHO05D005474 4.6e-61 238.0 140 74.3
Glyma.04G225900 Glycine max HOM05D004660 ORTHO05D005474 6.0e-61 237.7 141 78.7
Thecc.03G211800 Theobroma cacao HOM05D004660 ORTHO05D005474 6.0e-61 237.7 141 78.0
Haze_00331 Corylus avellana HOM05D004660 ORTHO05D005474 7.8e-61 237.3 140 78.6
CsaV3_4G009710 Cucumis sativus L. HOM05D004660 ORTHO05D005474 1.7e-60 236.1 140 75.0
CiPaw.05G208600 Carya illinoinensis HOM05D004660 ORTHO05D005474 2.3e-60 235.7 140 76.4
Sed0024142 Sechium edule HOM05D004660 ORTHO05D005474 2.3e-60 235.7 140 74.3
Lj1g0017846 Lotus japonicus HOM05D004660 ORTHO05D005474 3.0e-60 235.3 140 77.1
RcHm_v2.0_Chr4g0433201 Rosa chinensis HOM05D004660 ORTHO05D005474 3.0e-60 235.3 123 91.9
GSVIVG01038677001 Vitis vinifera HOM05D004660 ORTHO05D005474 3.0e-60 235.3 140 76.4
arahy.Tifrunner.gnm1.ann1.6FR5WN Arachis hypogaea HOM05D004660 ORTHO05D005474 3.9e-60 235.0 140 76.4
Glyma.06G138900 Glycine max HOM05D004660 ORTHO05D005474 5.1e-60 234.6 141 77.3
CiPaw.06G038500 Carya illinoinensis HOM05D004660 ORTHO05D005474 6.6e-60 234.2 141 77.3
VMungo0647G0407 Vigna mungo HOM05D004660 ORTHO05D005474 6.6e-60 234.2 140 75.0
MELO3C024844.2 Cucumis melo HOM05D004660 ORTHO05D005474 8.6e-60 233.8 140 74.3
Phvul.008G188100 Phaseolus vulgaris HOM05D004660 ORTHO05D005474 1.1e-59 233.4 140 75.7
Atru.chr12.2504 Acer truncatum HOM05D004660 ORTHO05D005474 2.5e-59 232.3 140 76.4
Atru.chr12.2527 Acer truncatum HOM05D004660 ORTHO05D005474 2.5e-59 232.3 140 76.4
LjContig00312_ERROPOS870357g0003416 Lotus japonicus HOM05D004660 ORTHO05D005474 3.3e-59 231.9 141 77.3
Glyma.14G188500 Glycine max HOM05D004660 ORTHO05D005474 5.6e-59 231.1 140 74.3
Hma1.2p1_0115F.1_g055760 Hydrangea macrophylla HOM05D004660 ORTHO05D005474 5.6e-59 231.1 140 75.7
VMungo1309G2317 Vigna mungo HOM05D004660 ORTHO05D005474 7.3e-59 230.7 142 76.8
Gohir.D08G117700 Gossypium hirsutum HOM05D004660 ORTHO05D005474 9.5e-59 230.3 141 75.9
Gorai.004G126200 Gossypium raimondii HOM05D004660 ORTHO05D005474 9.5e-59 230.3 141 75.9
TPR.G35910 Trifolium pratense HOM05D004660 ORTHO05D005474 1.2e-58 229.9 140 76.4
Ca_16837_v3 Cicer arietinum L. HOM05D004660 ORTHO05D005474 2.1e-58 229.2 140 75.0
COL.COLO4_14397 Corchorus olitorius HOM05D004660 ORTHO05D005474 2.1e-58 229.2 134 78.4
Glyma.02G221000 Glycine max HOM05D004660 ORTHO05D005474 3.6e-58 228.4 140 74.3
LjContig00155g0012911 Lotus japonicus HOM05D004660 ORTHO05D005474 3.6e-58 228.4 140 75.0
Aqoxy5G04391 Aquilegia oxysepala HOM05D004660 ORTHO05D005474 4.7e-58 228.0 142 76.1
TPR.G27918 Trifolium pratense HOM05D004660 ORTHO05D005474 4.7e-58 228.0 142 75.4
Psat2g060520 Pisum sativum HOM05D004660 ORTHO05D005474 6.2e-58 227.6 141 75.9
Psat7g096840 Pisum sativum HOM05D004660 ORTHO05D005474 6.2e-58 227.6 141 75.9
Lalb_Chr10g0102981 Lupinus albus HOM05D004660 ORTHO05D005474 8.1e-58 227.3 140 75.0
CSS0012455 Camellia sinensis var. sinensis HOM05D004660 ORTHO05D005474 1.4e-57 226.5 140 72.9
Gohir.A08G106300 Gossypium hirsutum HOM05D004660 ORTHO05D005474 1.4e-57 226.5 141 74.5
Phvul.009G040000 Phaseolus vulgaris HOM05D004660 ORTHO05D005474 1.8e-57 226.1 142 76.1
Ciclev10022731m.g Citrus clementina HOM05D004660 ORTHO05D005474 2.4e-57 225.7 140 74.3
Manes.05G195800 Manihot esculenta HOM05D004660 ORTHO05D005474 2.4e-57 225.7 140 72.1
Nitab4.5_0007121g0060 Nicotiana tabacum HOM05D004660 ORTHO05D005474 3.1e-57 225.3 140 72.9
Nitab4.5_0000021g0160 Nicotiana tabacum HOM05D004660 ORTHO05D005474 4.0e-57 224.9 140 72.9
Potri.015G000900 Populus trichocarpa HOM05D004660 ORTHO05D005474 4.0e-57 224.9 142 75.4
Gohir.A12G244500 Gossypium hirsutum HOM05D004660 ORTHO05D005474 5.2e-57 224.6 134 76.9
Gorai.008G263000 Gossypium raimondii HOM05D004660 ORTHO05D005474 5.2e-57 224.6 134 76.9
Solyc03g079970.1 Solanum lycopersicum HOM05D004660 ORTHO05D005474 5.2e-57 224.6 140 72.1
Sopen03g021700 Solanum pennellii HOM05D004660 ORTHO05D005474 5.2e-57 224.6 140 72.1
PGSC0003DMG400000574 Solanum tuberosum HOM05D004660 ORTHO05D005474 5.2e-57 224.6 140 72.1
CANSAT21G0927 Cannabis sativa HOM05D004660 ORTHO05D005474 6.8e-57 224.2 144 75.7
Oeu055424.1 Olea europaea HOM05D004660 ORTHO05D005474 6.8e-57 224.2 140 71.4
Sc19g0000390 Simmondsia chinensis HOM05D004660 ORTHO05D005474 6.8e-57 224.2 140 74.3
THA.LOC104814957 Tarenaya hassleriana HOM05D004660 ORTHO05D005474 8.9e-57 223.8 141 73.8
MBI12_g37476_MAGBIO Magnolia biondii HOM05D004660 ORTHO05D005474 1.2e-56 223.4 140 73.6
TWI39G0024 Tripterygium wilfordii HOM05D004660 ORTHO05D005474 1.2e-56 223.4 140 73.6
Gohir.D12G245400 Gossypium hirsutum HOM05D004660 ORTHO05D005474 1.5e-56 223.0 134 76.9
Migut.F00125 Erythranthe guttata HOM05D004660 ORTHO05D005474 2.0e-56 222.6 140 74.3
SGA_v2.0_scaffold44G16872 Striga asiatica HOM05D004660 ORTHO05D005474 2.6e-56 222.2 141 72.3
TAR629G0239 Trochodendron aralioides HOM05D004660 ORTHO05D005474 2.6e-56 222.2 140 72.1
arahy.Tifrunner.gnm1.ann1.N0NSHG Arachis hypogaea HOM05D004660 ORTHO05D005474 3.4e-56 221.9 133 77.4
CAN.G303.55 Capsicum annuum HOM05D004660 ORTHO05D005474 3.4e-56 221.9 140 72.9
Medtr5g068660 Medicago truncatula HOM05D004660 ORTHO05D005474 3.4e-56 221.9 142 74.6
DCAR_020388 Daucus carota HOM05D004660 ORTHO05D005474 4.4e-56 221.5 140 72.1
Thhalv10010801m.g Eutrema salsugineum HOM05D004660 ORTHO05D005474 4.4e-56 221.5 141 72.3
BcaB02g09594 Brassica carinata HOM05D004660 ORTHO05D005474 5.8e-56 221.1 140 71.4
MSTRG.26954 Avicennia marina HOM05D004660 ORTHO05D005474 7.6e-56 220.7 140 70.7
DCAR_014568 Daucus carota HOM05D004660 ORTHO05D005474 9.9e-56 220.3 140 71.4
vmacro10172 Vaccinium macrocarpon HOM05D004660 ORTHO05D005474 9.9e-56 220.3 140 72.1
Ca_05550_v3 Cicer arietinum L. HOM05D004660 ORTHO05D005474 1.3e-55 219.9 140 73.6
Potri.012G004900 Populus trichocarpa HOM05D004660 ORTHO05D005474 1.3e-55 219.9 143 73.4
THA.LOC104803315 Tarenaya hassleriana HOM05D004660 ORTHO05D005474 2.9e-55 218.8 141 70.9
TWI23G0412 Tripterygium wilfordii HOM05D004660 ORTHO05D005474 3.8e-55 218.4 140 72.1
Lj1P1031T30 Lonicera japonica HOM05D004660 ORTHO05D005474 6.4e-55 217.6 144 71.5
Peaxi162Scf01026g00258 Petunia axillaris HOM05D004660 ORTHO05D005474 6.4e-55 217.6 137 72.3
Psat5g071200 Pisum sativum HOM05D004660 ORTHO05D005474 6.4e-55 217.6 142 73.9
Rhsim09G0211000 Rhododendron simsii HOM05D004660 ORTHO05D005474 6.4e-55 217.6 140 70.7
EL10Ac3g05134 Beta vulgaris HOM05D004660 ORTHO05D005474 8.4e-55 217.2 140 68.6
SGA_v2.0_scaffold18G08494 Striga asiatica HOM05D004660 ORTHO05D005474 8.4e-55 217.2 140 71.4
BraA06t25770Z Brassica rapa HOM05D004660 ORTHO05D005474 1.1e-54 216.9 140 69.3
AUR62005951 Chenopodium quinoa HOM05D004660 ORTHO05D005474 1.9e-54 216.1 140 68.6
Thhalv10005081m.g Eutrema salsugineum HOM05D004660 ORTHO05D005474 1.9e-54 216.1 143 71.3
Manes.01G050300 Manihot esculenta HOM05D004660 ORTHO05D005474 1.9e-54 216.1 125 76.8
SalBow4G0874 Salvia bowleyana HOM05D004660 ORTHO05D005474 2.4e-54 215.7 140 70.7
A06p28270 Brassica napus HOM05D004660 ORTHO05D005474 5.4e-54 214.5 140 68.6
AUR62028114 Chenopodium quinoa HOM05D004660 ORTHO05D005474 7.1e-54 214.2 140 67.9
Hma1.2p1_0415F.1_g148340 Hydrangea macrophylla HOM05D004660 ORTHO05D005474 9.2e-54 213.8 142 69.0
Sp2g22770 Schrenkiella parvula HOM05D004660 ORTHO05D005474 9.2e-54 213.8 143 70.6
Aa31LG11G3870 Aethionema arabicum HOM05D004660 ORTHO05D005474 1.2e-53 213.4 141 70.9
Sp5g12560 Schrenkiella parvula HOM05D004660 ORTHO05D005474 2.1e-53 212.6 140 68.6
CSS0035101 Camellia sinensis var. sinensis HOM05D004660 ORTHO05D005474 2.7e-53 212.2 140 69.3
Migut.F00969 Erythranthe guttata HOM05D004660 ORTHO05D005474 2.7e-53 212.2 141 69.5
Ah.13g071030 Amaranthus hybridus HOM05D004660 ORTHO05D005474 3.5e-53 211.8 140 68.6
AL5G29390 Arabidopsis lyrata HOM05D004660 ORTHO05D005474 3.5e-53 211.8 141 70.2
Carub.0006s2247 Capsella rubella HOM05D004660 ORTHO05D005474 3.5e-53 211.8 143 70.6
Ah.13g069080 Amaranthus hybridus HOM05D004660 ORTHO05D005474 7.8e-53 210.7 140 67.9
THA.LOC104799676 Tarenaya hassleriana HOM05D004660 ORTHO05D005474 1.3e-52 209.9 141 68.8
AL6G36220 Arabidopsis lyrata HOM05D004660 ORTHO05D005474 3.0e-52 208.8 144 71.5
HanXRQChr01g0002691 Helianthus annuus HOM05D004660 ORTHO05D005474 1.5e-51 206.5 145 67.6
Oeu061046.1 Olea europaea HOM05D004660 ORTHO05D005474 1.9e-51 206.1 140 65.7
AT5G24610 Arabidopsis thaliana HOM05D004660 ORTHO05D005474 2.5e-51 205.7 143 72.0
BcaNung01246 Brassica carinata HOM05D004660 ORTHO05D005474 3.3e-51 205.3 144 70.1
CARHR188840 Cardamine hirsuta HOM05D004660 ORTHO05D005474 4.3e-51 204.9 144 68.8
AT3G49550 Arabidopsis thaliana HOM05D004660 ORTHO05D005474 2.8e-50 202.2 146 67.8
Lj3P891T43 Lonicera japonica HOM05D004660 ORTHO05D005474 2.8e-50 202.2 139 66.9
BcaC09g49961 Brassica carinata HOM05D004660 ORTHO05D005474 1.8e-49 199.5 141 68.8
BolC1t03007H Brassica oleracea HOM05D004660 ORTHO05D005474 1.8e-49 199.5 141 68.8
A06p35410 Brassica napus HOM05D004660 ORTHO05D005474 2.4e-49 199.1 144 68.8
BraA06t26464Z Brassica rapa HOM05D004660 ORTHO05D005474 2.4e-49 199.1 144 68.8
Nn3g18745 Nelumbo nucifera HOM05D004660 ORTHO05D005474 3.1e-49 198.7 134 70.1
A01p24630 Brassica napus HOM05D004660 ORTHO05D005474 4.0e-49 198.4 141 68.1
BraA01t02375Z Brassica rapa HOM05D004660 ORTHO05D005474 4.0e-49 198.4 141 68.1
BcaC03g17953 Brassica carinata HOM05D004660 ORTHO05D005474 5.2e-49 198.0 144 68.8
C02p60130 Brassica napus HOM05D004660 ORTHO05D005474 5.2e-49 198.0 144 68.8
BolC2t12069H Brassica oleracea HOM05D004660 ORTHO05D005474 5.2e-49 198.0 144 68.8
unitig_92.g28236 Utricularia gibba HOM05D004660 ORTHO05D005474 5.2e-49 198.0 140 64.3
A02p40180 Brassica napus HOM05D004660 ORTHO05D005474 6.9e-49 197.6 144 68.8
ATR0579G143 Amborella trichopoda HOM05D004660 ORTHO05D005474 1.2e-48 196.8 141 66.0
BraA02t08983Z Brassica rapa HOM05D004660 ORTHO05D005474 1.5e-48 196.4 144 68.1
C03p65490 Brassica napus HOM05D004660 ORTHO05D005474 2.6e-48 195.7 125 68.0
arahy.Tifrunner.gnm1.ann1.0Y4BRG Arachis hypogaea HOM05D004660 ORTHO05D005474 3.4e-48 195.3 134 70.1
CARHR158560 Cardamine hirsuta HOM05D004660 ORTHO05D005474 3.4e-48 195.3 145 64.1
BcaB07g29917 Brassica carinata HOM05D004660 ORTHO05D005474 4.4e-48 194.9 144 68.8
BcaNung02008 Brassica carinata HOM05D004660 ORTHO05D005474 2.9e-47 192.2 142 68.3
C07p43100 Brassica napus HOM05D004660 ORTHO05D005474 2.9e-47 192.2 142 68.3
BolC7t44836H Brassica oleracea HOM05D004660 ORTHO05D005474 2.9e-47 192.2 142 68.3
Carub.0005s1588 Capsella rubella HOM05D004660 ORTHO05D005474 3.8e-47 191.8 133 66.9
Zm00001eb220600 Zea mays HOM05D004660 ORTHO05D005474 1.9e-46 189.5 140 64.3
unitig_37.g11998 Utricularia gibba HOM05D004660 ORTHO05D005474 4.2e-46 188.3 140 61.4
CSS0045456 Camellia sinensis var. sinensis HOM05D004660 ORTHO05D005474 5.4e-46 188.0 119 70.6
Lsat_1_v5_gn_6_117240 Lactuca sativa HOM05D004660 ORTHO05D005474 3.9e-44 181.8 138 65.2
Os10g0509100 Oryza sativa ssp. japonica HOM05D004660 ORTHO05D005474 1.9e-43 179.5 140 63.6
Zm00001eb043850 Zea mays HOM05D004660 ORTHO05D005474 2.1e-42 176.0 140 62.1
MD07G1303200 Malus domestica HOM05D004660 ORTHO05D005474 8.1e-42 174.1 95 87.4
Medtr3g093320 Medicago truncatula HOM05D004660 ORTHO05D005474 5.1e-36 154.8 140 60.0
BcaC01g02416 Brassica carinata HOM05D004660 ORTHO05D005474 1.1e-33 147.1 95 68.4
Cc02_g00620 Coffea canephora HOM05D004660 ORTHO05D005474 3.1e-33 145.6 140 52.9
CSS0032658 Camellia sinensis var. sinensis HOM05D004660 ORTHO05D005474 4.5e-32 141.7 140 53.6
SEGI_20417 Sequoiadendron giganteum HOM05D004660 ORTHO05D005474 5.5e-30 134.8 141 49.6
SalBow2G1279 Salvia bowleyana HOM05D004660 ORTHO05D005474 7.1e-30 134.4 91 70.3
Mapoly0204s0014 Marchantia polymorpha HOM05D004660 ORTHO05D005474 2.7e-29 132.5 117 55.6
SMO351G0342 Selaginella moellendorffii HOM05D004660 ORTHO05D005474 9.0e-25 117.5 141 43.3
Aa31LG4G18040 Aethionema arabicum HOM05D004660 ORTHO05D005474 1.1e-22 110.5 134 47.0
AagrBONN_evm.TU.Sc2ySwM_117.1216 Anthoceros agrestis HOM05D004660 ORTHO05D005474 2.2e-18 96.3 102 48.0
Actinidia08719 Actinidia chinensis HOM05D004660 ORTHO05D005474 7.6e-16 87.8 63 66.7
DCAR_001793 Daucus carota HOM05D000001 ORTHO05D000003 8.5e-15 84.3 68 60.3
Cre07.g345800 Chlamydomonas reinhardtii HOM05D004660 ORTHO05D005474 9.7e-11 70.9 93 39.8
arahy.Tifrunner.gnm1.ann1.RHW5C7 Arachis hypogaea HOM05D017329 ORTHO05D005474 1.2e-08 63.9 37 73.0
PRCOL_00007052 Prasinoderma coloniale HOM05D004660 ORTHO05D005474 2.5e-06 56.2 66 40.9


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