Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G0839 Fragaria x ananassa HOM05D012798 ORTHO05D000039 1.0e-78 296.6 140 100.0
FAN03G2993 Fragaria x ananassa HOM05D012798 ORTHO05D000039 4.3e-77 291.2 140 98.6
FAN23G0894 Fragaria x ananassa HOM05D012798 ORTHO05D000039 4.3e-77 291.2 140 98.6
FAN23G2789 Fragaria x ananassa HOM05D012798 ORTHO05D000039 4.3e-77 291.2 140 98.6
FAN23G2143 Fragaria x ananassa HOM05D012798 ORTHO05D000039 1.7e-54 216.1 131 83.2
FAN23G1271 Fragaria x ananassa HOM05D012798 ORTHO05D000039 6.4e-41 171.0 114 78.9
FAN19G0311 Fragaria x ananassa HOM05D012798 ORTHO05D000039 9.6e-29 130.6 150 54.0
FAN23G0231 Fragaria x ananassa HOM05D000007 ORTHO05D000039 9.6e-29 130.6 149 51.0
RcHm_v2.0_Chr2g0095711 Rosa chinensis HOM05D000007 ORTHO05D000039 2.8e-28 129.0 150 50.0
FvH4_1g10030 Fragaria vesca HOM05D000007 ORTHO05D000039 1.1e-27 127.1 150 54.0
FvH4_1g10050 Fragaria vesca HOM05D000007 ORTHO05D000039 1.4e-27 126.7 150 53.3
RcHm_v2.0_Chr2g0096811 Rosa chinensis HOM05D000007 ORTHO05D000039 9.0e-27 124.0 149 45.0
FAN23G1147 Fragaria x ananassa HOM05D012798 ORTHO05D000039 7.1e-24 114.4 131 51.1
FvH4_1g10020 Fragaria vesca HOM05D012798 ORTHO05D000039 1.2e-18 97.1 152 41.4
Glyma.19G081500 Glycine max HOM05D000007 ORTHO05D000039 2.2e-09 66.2 150 35.3
TPR.G29063 Trifolium pratense HOM05D000007 ORTHO05D000039 3.8e-09 65.5 114 34.2
Lj1g0004080 Lotus japonicus HOM05D000007 ORTHO05D000039 6.5e-09 64.7 127 33.1
Glyma.16G063500 Glycine max HOM05D000007 ORTHO05D000039 8.5e-09 64.3 149 32.2
Glyma.16G063600 Glycine max HOM05D000007 ORTHO05D000039 2.5e-08 62.8 150 34.7
Medtr0115s0020 Medicago truncatula HOM05D000007 ORTHO05D000039 3.2e-08 62.4 159 35.8
Medtr5g048160 Medicago truncatula HOM05D000007 ORTHO05D000039 4.2e-08 62.0 157 32.5
MD17G1023400 Malus domestica HOM05D000007 ORTHO05D000039 5.5e-08 61.6 140 36.4
Lj1g0005950 Lotus japonicus HOM05D000007 ORTHO05D000039 7.2e-08 61.2 156 32.7
Lj1g0007805 Lotus japonicus HOM05D000007 ORTHO05D000039 9.3e-08 60.8 148 34.5
QL07p003496 Quercus lobata HOM05D000007 ORTHO05D000039 2.1e-07 59.7 91 34.1
VMungo1383G2008 Vigna mungo HOM05D000007 ORTHO05D000039 2.7e-07 59.3 150 33.3
Glyma.19G081700 Glycine max HOM05D000007 ORTHO05D000039 4.6e-07 58.5 149 31.5
Medtr0064s0160 Medicago truncatula HOM05D000007 ORTHO05D000039 4.6e-07 58.5 134 30.6
Cfa007609 Carpinus fangiana HOM05D000007 ORTHO05D000039 6.1e-07 58.2 157 30.6
Hma1.2p1_1837F.1_g304820 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 6.1e-07 58.2 131 29.8
Lj7C597G11 Lonicera japonica HOM05D000007 ORTHO05D000039 6.1e-07 58.2 149 30.2
Lj1g0001431 Lotus japonicus HOM05D000007 ORTHO05D000039 6.1e-07 58.2 148 31.1
Lju41C15T0 Lonicera japonica HOM05D000007 ORTHO05D000039 1.0e-06 57.4 157 33.1
arahy.Tifrunner.gnm1.ann1.L34NFV Arachis hypogaea HOM05D000007 ORTHO05D000039 1.3e-06 57.0 129 32.6
CAN.G294.25 Capsicum annuum HOM05D000007 ORTHO05D000521 1.8e-06 56.6 93 34.4
COL.COLO4_14558 Corchorus olitorius HOM05D000007 ORTHO05D000039 1.8e-06 56.6 127 33.9
Cfa007545 Carpinus fangiana HOM05D000007 ORTHO05D000039 3.0e-06 55.8 154 29.9
Lj1g0023224 Lotus japonicus HOM05D000007 ORTHO05D000039 3.0e-06 55.8 143 32.2
Lalb_Chr10g0092101 Lupinus albus HOM05D000007 ORTHO05D000039 3.9e-06 55.5 129 28.7
Rhsim03G0265900 Rhododendron simsii HOM05D000007 ORTHO05D000039 6.7e-06 54.7 148 30.4
GSVIVG01013506001 Vitis vinifera HOM05D000007 ORTHO05D000039 6.7e-06 54.7 91 38.5


User provided reference genes

Program Settings