Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G0816 Fragaria x ananassa HOM05D004910 ORTHO05D006864 0.0e+00 4093.1 2164 100.0
FAN10G3403 Fragaria x ananassa HOM05D004910 ORTHO05D006864 0.0e+00 3937.1 2164 96.3
FAN01G0980 Fragaria x ananassa HOM05D004910 ORTHO05D006864 0.0e+00 3912.1 2239 93.4
FAN06G0636 Fragaria x ananassa HOM05D004910 ORTHO05D006864 0.0e+00 3903.6 2164 95.8
FvH4_7g07740 Fragaria vesca HOM05D004910 ORTHO05D006864 0.0e+00 3897.0 2164 95.8
RcHm_v2.0_Chr1g0342311 Rosa chinensis HOM05D004910 ORTHO05D006864 0.0e+00 3670.9 2175 89.9
Prupe.2G105000 Prunus persica HOM05D004910 ORTHO05D006864 0.0e+00 3240.3 2184 80.2
MD07G1080500 Malus domestica HOM05D004910 ORTHO05D006864 0.0e+00 3218.7 2184 79.5
Cfa003693 Carpinus fangiana HOM05D004910 ORTHO05D006864 0.0e+00 2835.4 2187 70.2
Potri.013G071800 Populus trichocarpa HOM05D004910 ORTHO05D006864 0.0e+00 2683.3 2196 66.7
CANSAT25G1237 Cannabis sativa HOM05D004910 ORTHO05D006864 0.0e+00 2680.6 2187 67.1
Thecc.05G234000 Theobroma cacao HOM05D004910 ORTHO05D006864 0.0e+00 2669.0 2194 66.1
CiPaw.02G046700 Carya illinoinensis HOM05D004910 ORTHO05D006864 0.0e+00 2666.7 2195 66.7
Duzib177G0285 Durio zibethinus HOM05D004910 ORTHO05D006864 0.0e+00 2575.4 2197 64.3
TAR629G2465 Trochodendron aralioides HOM05D004910 ORTHO05D006864 0.0e+00 2572.0 2226 64.5
Manes.08G157000 Manihot esculenta HOM05D004910 ORTHO05D006864 0.0e+00 2568.9 2196 64.2
Dinv43524 Davidia involucrata HOM05D004910 ORTHO05D006864 0.0e+00 2525.7 2195 65.6
TWI34G0933 Tripterygium wilfordii HOM05D004910 ORTHO05D006864 0.0e+00 2509.2 2206 62.3
Gorai.007G249800 Gossypium raimondii HOM05D004910 ORTHO05D006864 0.0e+00 2497.2 2205 63.0
Glyma.03G099800 Glycine max HOM05D004910 ORTHO05D006864 0.0e+00 2475.3 2193 61.4
GSVIVG01019298001 Vitis vinifera HOM05D004910 ORTHO05D006864 0.0e+00 2453.3 2218 61.3
Ca_25886_v3 Cicer arietinum L. HOM05D004910 ORTHO05D006864 0.0e+00 2444.8 2189 62.4
Lj3g0022995 Lotus japonicus HOM05D004910 ORTHO05D006864 0.0e+00 2442.5 2195 62.1
Phvul.010G039700 Phaseolus vulgaris HOM05D004910 ORTHO05D006864 0.0e+00 2428.7 2189 60.2
Glyma.07G122900 Glycine max HOM05D004910 ORTHO05D006864 0.0e+00 2421.0 2196 60.7
TPR.G17367 Trifolium pratense HOM05D004910 ORTHO05D006864 0.0e+00 2420.2 2194 61.0
Medtr8g009780 Medicago truncatula HOM05D004910 ORTHO05D006864 0.0e+00 2411.3 2194 61.5
Lalb_Chr07g0194851 Lupinus albus HOM05D004910 ORTHO05D006864 0.0e+00 2406.7 2195 61.6
Haze_15792 Corylus avellana HOM05D004910 ORTHO05D006864 0.0e+00 2405.6 1950 67.4
Ciclev10030475m.g Citrus clementina HOM05D004910 ORTHO05D006864 0.0e+00 2374.0 2197 60.3
CsaV3_3G009930 Cucumis sativus L. HOM05D004910 ORTHO05D006864 0.0e+00 2350.9 2191 60.2
MELO3C006215.2 Cucumis melo HOM05D004910 ORTHO05D006864 0.0e+00 2350.1 2193 59.6
Eucgr.D01069 Eucalyptus grandis HOM05D004910 ORTHO05D006864 0.0e+00 2322.4 2194 59.7
Sed0008127 Sechium edule HOM05D004910 ORTHO05D006864 0.0e+00 2313.1 2193 59.2
PSO782G5450 Papaver somniferum HOM05D004910 ORTHO05D006864 0.0e+00 2265.7 2214 58.6
Rhsim07G0047300 Rhododendron simsii HOM05D004910 ORTHO05D006864 0.0e+00 2245.7 1993 61.0
COL.COLO4_08664 Corchorus olitorius HOM05D004910 ORTHO05D006864 0.0e+00 2245.3 2186 58.7
Cc08_g05600 Coffea canephora HOM05D004910 ORTHO05D006864 0.0e+00 2233.0 2196 56.9
Aqoxy3G02002 Aquilegia oxysepala HOM05D004910 ORTHO05D006864 0.0e+00 2215.3 2218 57.3
Nitab4.5_0006461g0010 Nicotiana tabacum HOM05D004910 ORTHO05D006864 0.0e+00 2214.9 2192 57.0
MBI04_g30775_MAGBIO Magnolia biondii HOM05D004910 ORTHO05D006864 0.0e+00 2212.6 2265 56.9
CAN.G992.20 Capsicum annuum HOM05D004910 ORTHO05D006864 0.0e+00 2205.3 2192 57.0
arahy.Tifrunner.gnm1.ann1.7UUD9R Arachis hypogaea HOM05D004910 ORTHO05D006864 0.0e+00 2203.7 2115 58.3
Nitab4.5_0000792g0070 Nicotiana tabacum HOM05D004910 ORTHO05D006864 0.0e+00 2197.9 2199 56.8
SalBow4G1969 Salvia bowleyana HOM05D004910 ORTHO05D006864 0.0e+00 2179.8 2205 55.0
DCAR_029567 Daucus carota HOM05D004910 ORTHO05D006864 0.0e+00 2172.1 2218 55.7
THA.LOC104805731 Tarenaya hassleriana HOM05D004910 ORTHO05D006864 0.0e+00 2154.0 2193 56.7
Sopen01g032990 Solanum pennellii HOM05D004910 ORTHO05D006864 0.0e+00 2153.6 2191 56.9
ClCG05G002500 Citrullus lanatus HOM05D004910 ORTHO05D006864 0.0e+00 2149.8 2113 57.4
VMungo0331G1962 Vigna mungo HOM05D004910 ORTHO05D006864 0.0e+00 2120.9 2067 57.6
vmacro13594 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 0.0e+00 2093.2 2149 54.8
Lsat_1_v5_gn_4_42261 Lactuca sativa HOM05D004910 ORTHO05D006864 0.0e+00 2089.7 2174 54.6
ECA234G3354 Erigeron canadensis HOM05D004910 ORTHO05D006864 0.0e+00 2069.3 2158 56.0
Gohir.D11G236600 Gossypium hirsutum HOM05D004910 ORTHO05D006864 0.0e+00 2052.7 1884 61.1
QL04p053216 Quercus lobata HOM05D004910 ORTHO05D006864 0.0e+00 2048.5 1674 66.5
Gohir.A11G225700 Gossypium hirsutum HOM05D004910 ORTHO05D006864 0.0e+00 2027.7 1886 60.9
Migut.N01670 Erythranthe guttata HOM05D004910 ORTHO05D006864 0.0e+00 2016.5 2189 52.4
EL10Ac1g00665 Beta vulgaris HOM05D004910 ORTHO05D006864 0.0e+00 1986.8 2302 50.7
HanXRQChr15g0492621 Helianthus annuus HOM05D004910 ORTHO05D006864 0.0e+00 1972.2 2165 52.7
CSS0017393 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 0.0e+00 1971.1 1905 58.6
ATR0829G021 Amborella trichopoda HOM05D004910 ORTHO05D006864 0.0e+00 1896.3 2213 52.8
Lj9A617T56 Lonicera japonica HOM05D004910 ORTHO05D006864 0.0e+00 1887.5 1845 57.1
Aa31LG9G17970 Aethionema arabicum HOM05D004910 ORTHO05D006864 0.0e+00 1887.1 2267 50.3
AL7G44770 Arabidopsis lyrata HOM05D004910 ORTHO05D006864 0.0e+00 1871.3 2185 51.9
Hund26917 Selenicereus undatus HOM05D004910 ORTHO05D006864 0.0e+00 1856.3 2105 51.7
Peaxi162Scf00907g00121 Petunia axillaris HOM05D004910 ORTHO05D006864 0.0e+00 1842.8 1986 54.8
Solyc01g081430.4 Solanum lycopersicum HOM05D004910 ORTHO05D006864 0.0e+00 1832.8 1953 55.2
SGA_v2.0_scaffold4G02226 Striga asiatica HOM05D004910 ORTHO05D006864 0.0e+00 1828.9 2044 53.2
Ah.05g177140 Amaranthus hybridus HOM05D004910 ORTHO05D006864 0.0e+00 1827.0 2155 50.1
PGR083G1400 Punica granatum HOM05D004910 ORTHO05D006864 0.0e+00 1747.3 1530 61.4
Zm00001eb025470 Zea mays HOM05D004910 ORTHO05D006864 0.0e+00 1615.5 1996 47.0
Oeu002050.1 Olea europaea HOM05D004910 ORTHO05D006864 0.0e+00 1595.5 1677 55.7
AUR62038026 Chenopodium quinoa HOM05D004910 ORTHO05D006864 0.0e+00 1541.6 1757 51.3
CDE12G0362 Ceratophyllum demersum HOM05D004910 ORTHO05D006864 0.0e+00 1468.8 1815 46.7
CARHR216720 Cardamine hirsuta HOM05D004910 ORTHO05D006864 0.0e+00 1447.6 1690 51.7
Sc26g0002020 Simmondsia chinensis HOM05D004910 ORTHO05D006864 0.0e+00 1436.4 1683 51.4
Atru.chr2.1651 Acer truncatum HOM05D004910 ORTHO05D006864 0.0e+00 1434.5 1133 66.5
arahy.Tifrunner.gnm1.ann1.X9S6DI Arachis hypogaea HOM05D004910 ORTHO05D006864 0.0e+00 1425.6 1557 54.2
AUR62014509 Chenopodium quinoa HOM05D004910 ORTHO05D006864 0.0e+00 1404.4 1692 49.9
Mapoly0032s0018 Marchantia polymorpha HOM05D004910 ORTHO05D006864 0.0e+00 1360.1 2326 41.1
Pp3c7_26820 Physcomitrium patens HOM05D004910 ORTHO05D006864 0.0e+00 1233.4 2270 38.6
AagrBONN_evm.TU.Sc2ySwM_362.1947 Anthoceros agrestis HOM05D004910 ORTHO05D006864 0.0e+00 1212.2 1973 39.4
Psat4g216280 Pisum sativum HOM05D004910 ORTHO05D006864 0.0e+00 1157.1 1298 51.5
Atru.chr2.1650 Acer truncatum HOM05D004910 ORTHO05D006864 0.0e+00 1150.2 1020 64.5
Cpa.g.sc73.58 Carica papaya HOM05D004910 ORTHO05D006864 0.0e+00 1096.6 1023 59.1
arahy.Tifrunner.gnm1.ann1.L1X5S4 Arachis hypogaea HOM05D004910 ORTHO05D006864 3.0e-310 1069.7 1141 54.5
PSO063G2935 Papaver somniferum HOM05D004910 ORTHO05D006864 2.2e-305 1053.5 981 59.2
PSO063G6831 Papaver somniferum HOM05D004910 ORTHO05D006864 3.1e-299 1033.1 1125 55.5
Os04g0218600 Oryza sativa ssp. japonica HOM05D004910 ORTHO05D006864 3.0e-262 910.2 991 52.3
SEGI_03249 Sequoiadendron giganteum HOM05D004910 ORTHO05D006864 8.7e-262 908.7 1373 41.2
QL04p053202 Quercus lobata HOM05D004910 ORTHO05D006864 5.7e-229 799.7 533 76.7
Actinidia21201 Actinidia chinensis HOM05D004910 ORTHO05D006864 8.8e-222 775.8 875 50.7
CBR_g49462 Chara braunii HOM05D004910 ORTHO05D006864 2.9e-217 760.8 2419 29.3
Psat4g215960 Pisum sativum HOM05D004910 ORTHO05D006864 1.7e-204 718.4 533 69.2
SMO347G0286 Selaginella moellendorffii HOM05D004910 ORTHO05D006864 6.8e-198 696.4 1453 33.4
unitig_578.g16705 Utricularia gibba HOM05D004910 ORTHO05D006864 3.4e-197 694.1 651 56.8
Hma1.2p1_0353F.1_g133240 Hydrangea macrophylla HOM05D004910 ORTHO05D006864 4.6e-154 550.8 435 67.4
arahy.Tifrunner.gnm1.ann1.2JI1W5 Arachis hypogaea HOM05D004910 ORTHO05D006864 4.3e-144 517.7 399 66.2
Prupe.2G100700 Prunus persica HOM05D004910 ORTHO05D006864 4.6e-138 497.7 379 70.7
PGR083G0666 Punica granatum HOM05D004910 ORTHO05D006864 3.9e-121 441.4 566 52.3
AUR62014510 Chenopodium quinoa HOM05D004910 ORTHO05D006864 7.9e-114 417.2 427 55.7
AUR62038025 Chenopodium quinoa HOM05D004910 ORTHO05D006864 7.9e-114 417.2 426 54.9
CSS0010640 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 1.3e-111 409.8 343 65.9
Cpa.g.sc73.62 Carica papaya HOM05D004910 ORTHO05D006864 7.4e-104 384.0 212 87.7
Solyc01g081420.3 Solanum lycopersicum HOM05D004910 ORTHO05D006864 5.5e-99 367.9 216 81.9
Peaxi162Scf00907g00123 Petunia axillaris HOM05D004910 ORTHO05D006864 2.2e-95 355.9 230 77.0
Actinidia21200 Actinidia chinensis HOM05D004910 ORTHO05D006864 1.1e-91 343.6 335 58.2
Haze_15794 Corylus avellana HOM05D004910 ORTHO05D006864 6.8e-89 334.3 183 88.5
Actinidia31737 Actinidia chinensis HOM05D004910 ORTHO05D006864 4.0e-81 308.5 574 37.5
Cpa.g.sc73.57 Carica papaya HOM05D004910 ORTHO05D006864 2.6e-80 305.8 344 59.0
Psat4g216320 Pisum sativum HOM05D004910 ORTHO05D006864 1.5e-75 290.0 304 71.1
CDE12G0963 Ceratophyllum demersum HOM05D004910 ORTHO05D006864 4.0e-73 282.0 376 56.6
Cpa.g.sc73.59 Carica papaya HOM05D004910 ORTHO05D006864 8.9e-65 254.2 257 56.0
VMungo0331G1288 Vigna mungo HOM05D004910 ORTHO05D010195 8.6e-60 237.7 128 88.3
FvH4_1g21580 Fragaria vesca HOM05D004910 ORTHO05D045425 1.4e-57 230.3 135 90.4
AagrBONN_evm.TU.Sc2ySwM_117.2552 Anthoceros agrestis HOM05D004910 ORTHO05D006864 2.0e-56 226.5 203 58.1
Gohir.A11G225602 Gossypium hirsutum HOM05D004910 ORTHO05D006864 1.3e-52 213.8 175 65.1
Rhsim07G0047400 Rhododendron simsii HOM05D004910 ORTHO05D006864 1.8e-49 203.4 162 69.8
vmacro13596 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 1.2e-48 200.7 162 68.5
PGSC0003DMG400031109 Solanum tuberosum HOM05D004910 ORTHO05D006864 2.5e-43 183.0 159 69.2
CSS0011325 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 3.6e-42 179.1 133 63.9
Lj9A617T57 Lonicera japonica HOM05D004910 ORTHO05D006864 8.1e-42 177.9 144 69.4
CSS0010022 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 9.9e-40 171.0 165 58.2
CSS0036242 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 1.3e-39 170.6 165 58.2
Os10g0581000 Oryza sativa ssp. japonica HOM05D004910 ORTHO05D006864 2.3e-36 159.8 333 47.7
CSS0002002 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 1.3e-34 154.1 73 94.5
CSS0008041 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 1.3e-34 154.1 73 94.5
Psat6g100000 Pisum sativum HOM05D004910 ORTHO05D030483 1.2e-32 147.5 227 43.2
RcHm_v2.0_Chr4g0408121 Rosa chinensis HOM05D004910 ORTHO05D006864 2.2e-31 143.3 85 85.9
Actinidia21203 Actinidia chinensis HOM05D004910 ORTHO05D006864 1.3e-28 134.0 64 93.8
Os04g0218701 Oryza sativa ssp. japonica HOM05D004910 ORTHO05D006864 8.7e-28 131.3 374 44.9
SEGI_03241 Sequoiadendron giganteum HOM05D004910 ORTHO05D006864 1.1e-25 124.4 99 61.6
RcHm_v2.0_Chr4g0407941 Rosa chinensis HOM05D004910 ORTHO05D019205 3.1e-25 122.9 65 90.8
FAN23G3082 Fragaria x ananassa HOM05D004910 ORTHO05D045425 2.9e-23 116.3 65 90.8
SEGI_03420 Sequoiadendron giganteum HOM05D004910 ORTHO05D006864 1.4e-22 114.0 178 46.1
Psat0s999g0120 Pisum sativum HOM05D004910 ORTHO05D030483 9.6e-19 101.3 147 44.2
CSS0032650 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 1.8e-17 97.1 57 80.7
ClCG00G006380 Citrullus lanatus HOM05D004910 ORTHO05D006864 5.9e-16 92.0 53 81.1
Dinv00622 Davidia involucrata HOM05D004910 ORTHO05D006864 6.5e-15 88.6 79 60.8
Nitab4.5_0011076g0010 Nicotiana tabacum HOM05D004910 ORTHO05D006864 6.5e-15 88.6 73 64.4
FAN03G1104 Fragaria x ananassa HOM05D004910 ORTHO05D019205 2.7e-13 83.2 53 77.4
Actinidia21202 Actinidia chinensis HOM05D004910 ORTHO05D030909 1.5e-08 67.4 49 75.5
Gohir.D06G038650 Gossypium hirsutum HOM05D004910 ORTHO05D030909 3.4e-08 66.2 55 58.2
Haze_15793 Corylus avellana HOM05D004910 ORTHO05D006864 4.5e-08 65.9 41 70.7
Phvul.010G039400 Phaseolus vulgaris HOM05D004910 ORTHO05D006864 1.0e-07 64.7 55 63.6
vmacro13595 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 3.2e-06 59.7 41 78.0
Gohir.D06G038000 Gossypium hirsutum HOM05D004910 ORTHO05D030909 5.5e-06 58.9 50 58.0


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