Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G0792 Fragaria x ananassa HOM05D006865 ORTHO05D009005 5.1e-105 384.4 192 100.0
FAN02G1779 Fragaria x ananassa HOM05D006865 ORTHO05D009005 1.2e-103 379.8 191 99.0
FAN03G1515 Fragaria x ananassa HOM05D006865 ORTHO05D009005 5.4e-99 364.4 182 98.9
FAN27G2310 Fragaria x ananassa HOM05D006865 ORTHO05D009005 6.0e-90 334.3 190 90.0
FvH4_2g35860 Fragaria vesca HOM05D006865 ORTHO05D009005 1.0e-89 333.6 173 97.1
FAN15G3339 Fragaria x ananassa HOM05D006865 ORTHO05D009005 4.3e-88 328.2 191 89.0
RcHm_v2.0_Chr6g0305961 Rosa chinensis HOM05D006865 ORTHO05D009005 2.7e-66 255.8 191 75.9
MD15G1095700 Malus domestica HOM05D006865 ORTHO05D009005 2.1e-42 176.4 178 61.2
CANSAT25G0847 Cannabis sativa HOM05D006865 ORTHO05D009005 1.7e-36 156.8 177 54.8
QL12p029455 Quercus lobata HOM05D006865 ORTHO05D009005 3.8e-36 155.6 183 56.3
CiPaw.07G205700 Carya illinoinensis HOM05D006865 ORTHO05D009005 6.7e-33 144.8 177 57.1
Sed0006345 Sechium edule HOM05D006865 ORTHO05D009005 7.7e-29 131.3 174 50.0
Prupe.1G450700 Prunus persica HOM05D006865 ORTHO05D009005 3.8e-28 129.0 193 46.1
Duzib187G1827 Durio zibethinus HOM05D006865 ORTHO05D009005 5.5e-27 125.2 209 45.5
ClCG11G015200 Citrullus lanatus HOM05D006865 ORTHO05D009005 3.0e-25 119.4 175 45.7
CsaV3_3G048620 Cucumis sativus L. HOM05D006865 ORTHO05D009005 5.2e-25 118.6 174 45.4
Thecc.09G042300 Theobroma cacao HOM05D006865 ORTHO05D009005 2.8e-23 112.8 189 47.6
Dinv30268 Davidia involucrata HOM05D006865 ORTHO05D009005 4.8e-23 112.1 188 45.2
Potri.006G240400 Populus trichocarpa HOM05D006865 ORTHO05D009005 1.4e-22 110.5 205 42.0
Manes.16G071500 Manihot esculenta HOM05D006865 ORTHO05D009005 1.8e-22 110.2 188 42.6
Cfa016677 Carpinus fangiana HOM05D006865 ORTHO05D009005 2.7e-21 106.3 175 41.7
Haze_19694 Corylus avellana HOM05D006865 ORTHO05D009005 3.5e-21 105.9 176 41.5
Hma1.2p1_1163F.1_g262770 Hydrangea macrophylla HOM05D006865 ORTHO05D009005 6.6e-20 101.7 182 42.3
Ciclev10008902m.g Citrus clementina HOM05D006865 ORTHO05D009005 1.9e-19 100.1 176 43.8
TAR636G1122 Trochodendron aralioides HOM05D006865 ORTHO05D009005 2.5e-19 99.8 202 42.1
Migut.E01518 Erythranthe guttata HOM05D006865 ORTHO05D009005 4.2e-19 99.0 195 41.0
Nn3g18133 Nelumbo nucifera HOM05D006865 ORTHO05D009005 7.2e-19 98.2 181 40.9
Cc08_g09210 Coffea canephora HOM05D006865 ORTHO05D009005 1.2e-18 97.4 187 40.1
AUR62009307 Chenopodium quinoa HOM05D006865 ORTHO05D009005 4.0e-17 92.4 176 39.2
MELO3C003458.2 Cucumis melo HOM05D006865 ORTHO05D009005 8.9e-17 91.3 177 39.5
Lalb_Chr23g0269541 Lupinus albus HOM05D006865 ORTHO05D009005 1.2e-16 90.9 195 40.5
TWI63G0791 Tripterygium wilfordii HOM05D006865 ORTHO05D009005 4.4e-16 89.0 177 42.4
Aqoxy7G03866 Aquilegia oxysepala HOM05D006865 ORTHO05D009005 1.3e-15 87.4 195 40.5
Lj1g0027381 Lotus japonicus HOM05D006865 ORTHO05D009005 1.3e-15 87.4 170 40.6
Peaxi162Scf00276g00123 Petunia axillaris HOM05D006865 ORTHO05D009005 2.8e-15 86.3 167 41.3
arahy.Tifrunner.gnm1.ann1.T16V0S Arachis hypogaea HOM05D006865 ORTHO05D009005 6.3e-15 85.1 189 38.1
COL.COLO4_18674 Corchorus olitorius HOM05D003951 ORTHO05D005378 6.3e-15 85.1 140 44.3
PSO210G5031 Papaver somniferum HOM05D006865 ORTHO05D009005 8.3e-15 84.7 187 42.2
MSTRG.14022 Avicennia marina HOM05D006865 ORTHO05D009005 2.4e-14 83.2 171 40.9
Oeu031553.1 Olea europaea HOM05D006865 ORTHO05D009005 2.4e-14 83.2 176 38.6
Phvul.009G107700 Phaseolus vulgaris HOM05D006865 ORTHO05D009005 7.0e-14 81.6 178 39.3
SGA_v2.0_scaffold163G38079 Striga asiatica HOM05D006865 ORTHO05D009005 9.2e-14 81.3 173 37.6
arahy.Tifrunner.gnm1.ann1.ZC464Z Arachis hypogaea HOM05D006865 ORTHO05D009005 1.2e-13 80.9 189 37.0
Nitab4.5_0001567g0190 Nicotiana tabacum HOM05D006865 ORTHO05D009005 1.2e-13 80.9 174 39.7
PSO210G4422 Papaver somniferum HOM05D006865 ORTHO05D009005 1.6e-13 80.5 186 40.9
CDE02G3046 Ceratophyllum demersum HOM05D004680 ORTHO05D005939 2.7e-13 79.7 188 40.4
Solyc11g071240.2 Solanum lycopersicum HOM05D006865 ORTHO05D009005 3.5e-13 79.3 165 38.2
Atru.chr7.2136 Acer truncatum HOM05D006865 ORTHO05D009005 4.5e-13 79.0 171 36.8
Medtr3g110088 Medicago truncatula HOM05D006865 ORTHO05D009005 1.7e-12 77.0 188 36.2
Medtr3g110138 Medicago truncatula HOM05D006865 ORTHO05D009005 1.7e-12 77.0 188 36.2
VMungo1309G1411 Vigna mungo HOM05D006865 ORTHO05D009005 1.7e-12 77.0 179 39.1
Nitab4.5_0000664g0200 Nicotiana tabacum HOM05D006865 ORTHO05D009005 2.3e-12 76.6 175 39.4
BcaB08g37044 Brassica carinata HOM05D006865 ORTHO05D009005 1.5e-11 73.9 178 34.3
CDE08G1680 Ceratophyllum demersum HOM05D006865 ORTHO05D009005 2.5e-11 73.2 184 42.9
BcaC03g13374 Brassica carinata HOM05D006865 ORTHO05D009005 3.3e-11 72.8 185 34.6
C02p05200 Brassica napus HOM05D006865 ORTHO05D009005 3.3e-11 72.8 185 34.6
PGR044G0390 Punica granatum HOM05D006865 ORTHO05D009005 3.3e-11 72.8 110 44.5
Carub.0006s1002 Capsella rubella HOM05D006865 ORTHO05D009005 4.3e-11 72.4 183 36.6
BolC2t06470H Brassica oleracea HOM05D006865 ORTHO05D009005 5.6e-11 72.0 185 34.1
Sp6g32050 Schrenkiella parvula HOM05D006865 ORTHO05D009005 5.6e-11 72.0 188 35.6
CARHR201670 Cardamine hirsuta HOM05D006865 ORTHO05D009005 7.3e-11 71.6 180 33.9
A02p01060 Brassica napus HOM05D006865 ORTHO05D009005 1.6e-10 70.5 185 34.6
BraA02t05086Z Brassica rapa HOM05D006865 ORTHO05D009005 1.6e-10 70.5 185 34.6
AT5G11550 Arabidopsis thaliana HOM05D006865 ORTHO05D009005 2.8e-10 69.7 178 35.4
Glyma.06G083600 Glycine max HOM05D006865 ORTHO05D009005 2.8e-10 69.7 175 37.7
BcaC04g19215 Brassica carinata HOM05D006865 ORTHO05D009005 1.0e-09 67.8 179 35.2
C09p65260 Brassica napus HOM05D006865 ORTHO05D009005 1.0e-09 67.8 179 35.2
DCAR_007711 Daucus carota HOM05D006865 ORTHO05D009005 1.0e-09 67.8 170 37.1
A10p26220 Brassica napus HOM05D006865 ORTHO05D009005 1.8e-09 67.0 179 34.6
BraA10t44679Z Brassica rapa HOM05D006865 ORTHO05D009005 1.8e-09 67.0 179 34.6
Sabra06G0188000 Salix brachista HOM05D006865 ORTHO05D009005 1.8e-09 67.0 67 55.2
HanXRQChr11g0351701 Helianthus annuus HOM05D006865 ORTHO05D009005 6.8e-09 65.1 165 37.0
BcaNung01933 Brassica carinata HOM05D006865 ORTHO05D009005 8.9e-09 64.7 180 35.6
BolC9t59354H Brassica oleracea HOM05D006865 ORTHO05D009005 1.5e-08 63.9 179 34.6
MBI01_g38802_MAGBIO Magnolia biondii HOM05D006865 ORTHO05D009005 1.5e-08 63.9 166 37.3
Thhalv10014169m.g Eutrema salsugineum HOM05D006865 ORTHO05D009005 2.0e-08 63.5 180 34.4
ECA248G0081 Erigeron canadensis HOM05D006865 ORTHO05D009005 3.4e-08 62.8 164 36.0
AL6G22220 Arabidopsis lyrata HOM05D006865 ORTHO05D009005 1.3e-07 60.8 160 35.6
EL10Ac2g04049 Beta vulgaris HOM05D006865 ORTHO05D009005 3.7e-07 59.3 178 35.4
Potri.018G039701 Populus trichocarpa HOM05D006865 ORTHO05D009005 3.7e-07 59.3 101 41.6
Lsat_1_v5_gn_1_49660 Lactuca sativa HOM05D006865 ORTHO05D009005 6.4e-07 58.5 194 32.5
THA.LOC104814775 Tarenaya hassleriana HOM05D006865 ORTHO05D009005 8.3e-07 58.2 194 29.9
Lj8A588T26 Lonicera japonica HOM05D006865 ORTHO05D009005 1.4e-06 57.4 176 32.4
Glyma.04G081900 Glycine max HOM05D006865 ORTHO05D009005 2.4e-06 56.6 171 33.3
BcaB01g05476 Brassica carinata HOM05D006865 ORTHO05D009005 3.2e-06 56.2 114 40.4
A03p05090 Brassica napus HOM05D011734 ORTHO05D009005 7.0e-06 55.1 171 31.0


User provided reference genes

Program Settings