Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G0661 Fragaria x ananassa HOM05D017399 ORTHO05D020730 8.8e-173 610.1 298 100.0
FAN06G0592 Fragaria x ananassa HOM05D017399 ORTHO05D020730 1.5e-87 327.0 251 71.3
FvH4_7g11070 Fragaria vesca HOM05D017399 ORTHO05D020730 1.1e-61 241.1 220 62.7
RcHm_v2.0_Chr7g0177921 Rosa chinensis HOM05D002759 ORTHO05D003290 5.5e-50 202.2 165 63.6
FAN10G2628 Fragaria x ananassa HOM05D017399 ORTHO05D020730 1.7e-46 190.7 117 82.1
FAN10G4259 Fragaria x ananassa HOM05D017399 ORTHO05D020730 1.7e-46 190.7 117 81.2
FvH4_5g17590 Fragaria vesca HOM05D017399 ORTHO05D045498 5.0e-35 152.5 142 57.7
FAN18G1639 Fragaria x ananassa HOM05D017399 ORTHO05D045498 5.4e-29 132.5 73 82.2
QL02p098685 Quercus lobata HOM05D002759 ORTHO05D003290 5.2e-24 115.9 192 39.6
Cfa017189 Carpinus fangiana HOM05D002759 ORTHO05D003290 3.2e-21 106.7 191 36.6
FAN01G1856 Fragaria x ananassa HOM05D002759 ORTHO05D020730 7.0e-21 105.5 52 98.1
Haze_21022 Corylus avellana HOM05D002759 ORTHO05D003290 2.0e-20 104.0 194 35.6
FAN11G2638 Fragaria x ananassa HOM05D002759 ORTHO05D003290 5.0e-19 99.4 196 34.2
RcHm_v2.0_Chr7g0222331 Rosa chinensis HOM05D002759 ORTHO05D003290 6.6e-19 99.0 197 33.0
FAN25G1732 Fragaria x ananassa HOM05D002759 ORTHO05D003290 1.5e-18 97.8 195 33.3
MD00G1166400 Malus domestica HOM05D002759 ORTHO05D003290 1.5e-18 97.8 195 34.9
MD15G1418900 Malus domestica HOM05D002759 ORTHO05D003290 1.5e-18 97.8 195 34.9
FvH4_3g35420 Fragaria vesca HOM05D002759 ORTHO05D003290 2.5e-18 97.1 195 33.8
FAN16G3014 Fragaria x ananassa HOM05D002759 ORTHO05D003290 9.5e-18 95.1 195 32.8
CiPaw.05G042600 Carya illinoinensis HOM05D002759 ORTHO05D003290 4.7e-17 92.8 195 34.4
Prupe.1G563000 Prunus persica HOM05D002759 ORTHO05D003290 6.2e-17 92.4 192 33.9
Potri.003G021700 Populus trichocarpa HOM05D002759 ORTHO05D003290 8.1e-17 92.0 188 32.4
TAR381G0620 Trochodendron aralioides HOM05D002759 ORTHO05D003290 1.1e-16 91.7 191 33.0
Sed0002146 Sechium edule HOM05D002759 ORTHO05D003290 1.8e-16 90.9 190 32.1
CSS0015736 Camellia sinensis var. sinensis HOM05D002759 ORTHO05D003290 1.3e-14 84.7 187 31.6
TWI59G0497 Tripterygium wilfordii HOM05D002759 ORTHO05D003290 1.7e-14 84.3 190 32.1
Ciclev10000008m.g Citrus clementina HOM05D002759 ORTHO05D003290 6.4e-14 82.4 188 33.5
GSVIVG01023021001 Vitis vinifera HOM05D002759 ORTHO05D003290 6.4e-14 82.4 192 31.2
ClCG08G010020 Citrullus lanatus HOM05D002759 ORTHO05D003290 1.1e-13 81.6 192 30.7
Dinv24260 Davidia involucrata HOM05D002759 ORTHO05D003290 1.1e-13 81.6 182 33.0
CsaV3_6G032190 Cucumis sativus L. HOM05D002759 ORTHO05D003290 1.4e-13 81.3 191 30.9
Manes.07G013200 Manihot esculenta HOM05D002759 ORTHO05D003290 3.2e-13 80.1 181 30.4
Psat1g219920 Pisum sativum HOM05D002759 ORTHO05D003290 3.2e-13 80.1 189 30.7
Actinidia39057 Actinidia chinensis HOM05D002759 ORTHO05D003290 4.1e-13 79.7 192 28.6
HanXRQChr10g0290421 Helianthus annuus HOM05D002759 ORTHO05D003290 5.4e-13 79.3 188 31.9
MELO3C011463.2 Cucumis melo HOM05D002759 ORTHO05D003290 9.2e-13 78.6 192 30.2
Lalb_Chr20g0123401 Lupinus albus HOM05D002759 ORTHO05D003290 9.2e-13 78.6 189 32.8
Glyma.15G048100 Glycine max HOM05D002759 ORTHO05D003290 7.8e-12 75.5 189 30.2
CANSAT11G0811 Cannabis sativa HOM05D002759 ORTHO05D003290 1.7e-11 74.3 190 29.5
Medtr7g023120 Medicago truncatula HOM05D002759 ORTHO05D003290 1.7e-11 74.3 189 30.2
Atru.chr6.1027 Acer truncatum HOM05D002759 ORTHO05D003290 2.3e-11 73.9 194 30.4
Glyma.08G184200 Glycine max HOM05D002759 ORTHO05D003290 8.6e-11 72.0 189 30.2
Lsat_1_v5_gn_5_109460 Lactuca sativa HOM05D002759 ORTHO05D003290 8.6e-11 72.0 181 29.3
Gorai.002G207900 Gossypium raimondii HOM05D002759 ORTHO05D003290 1.1e-10 71.6 186 30.6
Atru.chr6.1078 Acer truncatum HOM05D002759 ORTHO05D003290 1.5e-10 71.2 194 29.9
COL.COLO4_08439 Corchorus olitorius HOM05D002759 ORTHO05D003290 1.9e-10 70.9 189 28.0
Duzib052G0069 Durio zibethinus HOM05D002759 ORTHO05D003290 2.5e-10 70.5 191 28.8
Eucgr.G00634 Eucalyptus grandis HOM05D002759 ORTHO05D003290 2.5e-10 70.5 173 30.6
THA.LOC104814230 Tarenaya hassleriana HOM05D002759 ORTHO05D003290 2.5e-10 70.5 135 31.9
Thecc.02G041500 Theobroma cacao HOM05D002759 ORTHO05D003290 2.5e-10 70.5 192 28.6
ECA234G1843 Erigeron canadensis HOM05D002759 ORTHO05D003290 3.3e-10 70.1 187 28.3
C07p52320 Brassica napus HOM05D002759 ORTHO05D003290 7.3e-10 68.9 131 30.5
Nn5g28049 Nelumbo nucifera HOM05D002759 ORTHO05D003290 9.5e-10 68.6 185 29.7
AL7G30550 Arabidopsis lyrata HOM05D002759 ORTHO05D003290 1.6e-09 67.8 135 29.6
Lj6g0007416 Lotus japonicus HOM05D002759 ORTHO05D003290 1.6e-09 67.8 189 27.0
C01p17510 Brassica napus HOM05D002759 ORTHO05D003290 2.1e-09 67.4 135 30.4
Ca_00091_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 2.8e-09 67.0 187 28.9
Ca_29930_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 2.8e-09 67.0 187 28.9
Carub.0007s1830 Capsella rubella HOM05D002759 ORTHO05D003290 3.6e-09 66.6 187 26.7
Medtr2g007790 Medicago truncatula HOM05D002759 ORTHO05D003290 3.6e-09 66.6 189 27.5
BcaC09g51048 Brassica carinata HOM05D002759 ORTHO05D003290 4.7e-09 66.2 134 31.3
A03p53910 Brassica napus HOM05D002759 ORTHO05D003290 4.7e-09 66.2 131 29.8
BraA03t14460Z Brassica rapa HOM05D002759 ORTHO05D003290 4.7e-09 66.2 132 28.8
Phvul.006G212401 Phaseolus vulgaris HOM05D002759 ORTHO05D003290 6.2e-09 65.9 189 28.0
BolC7t45725H Brassica oleracea HOM05D002759 ORTHO05D003290 8.1e-09 65.5 132 29.5
BolC1t01691H Brassica oleracea HOM05D002759 ORTHO05D003290 1.8e-08 64.3 135 29.6
Oeu008876.1 Olea europaea HOM05D002759 ORTHO05D003290 1.8e-08 64.3 195 27.7
AT4G22970 Arabidopsis thaliana HOM05D002759 ORTHO05D003290 5.2e-08 62.8 135 27.4
A01p14240 Brassica napus HOM05D002759 ORTHO05D003290 6.8e-08 62.4 123 31.7
Sp7g21060 Schrenkiella parvula HOM05D002759 ORTHO05D003290 6.8e-08 62.4 135 28.9
arahy.Tifrunner.gnm1.ann1.VDG0KY Arachis hypogaea HOM05D002759 ORTHO05D003290 8.9e-08 62.0 176 27.8
Rhsim11G0131800 Rhododendron simsii HOM05D002759 ORTHO05D003290 8.9e-08 62.0 192 27.6
BraA01t01371Z Brassica rapa HOM05D002759 ORTHO05D003290 1.5e-07 61.2 136 27.9
CAN.G1352.21 Capsicum annuum HOM05D002759 ORTHO05D003290 1.5e-07 61.2 182 26.9
arahy.Tifrunner.gnm1.ann1.YVTC7U Arachis hypogaea HOM05D002759 ORTHO05D003290 2.6e-07 60.5 175 28.0
BcaNung01007 Brassica carinata HOM05D002759 ORTHO05D003290 2.6e-07 60.5 136 26.5
Peaxi162Scf00011g00138 Petunia axillaris HOM05D002759 ORTHO05D003290 2.6e-07 60.5 182 26.9
Lj1g0017629 Lotus japonicus HOM05D002759 ORTHO05D003290 3.4e-07 60.1 112 33.9
PGR042G2027 Punica granatum HOM05D002759 ORTHO05D003290 3.4e-07 60.1 213 27.2
Thhalv10029518m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 4.4e-07 59.7 189 27.0
Aa31LG6G5020 Aethionema arabicum HOM05D002759 ORTHO05D003290 1.3e-06 58.2 135 28.9
MD08G1226100 Malus domestica HOM05D002759 ORTHO05D003290 1.3e-06 58.2 112 33.0
Sabra03G0013600 Salix brachista HOM05D002759 ORTHO05D003290 1.3e-06 58.2 178 27.0
Nitab4.5_0004005g0050 Nicotiana tabacum HOM05D002759 ORTHO05D003290 1.7e-06 57.8 179 26.3
Thhalv10024187m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 2.2e-06 57.4 139 28.1
Sopen01g046990 Solanum pennellii HOM05D002759 ORTHO05D003290 2.9e-06 57.0 182 25.8
Nitab4.5_0005539g0020 Nicotiana tabacum HOM05D002759 ORTHO05D003290 8.4e-06 55.5 182 25.8


User provided reference genes

Program Settings