Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G0548 Fragaria x ananassa HOM05D001552 ORTHO05D211015 9.1e-61 237.3 175 100.0
RcHm_v2.0_Chr6g0275701 Rosa chinensis HOM05D001552 ORTHO05D003294 1.4e-24 117.1 208 45.2
FvH4_2g13940 Fragaria vesca HOM05D001552 ORTHO05D003294 8.3e-22 107.8 200 48.5
FAN24G0455 Fragaria x ananassa HOM05D001552 ORTHO05D003294 1.1e-21 107.5 200 43.0
FAN27G2666 Fragaria x ananassa HOM05D001552 ORTHO05D003294 3.2e-21 105.9 202 49.0
FAN20G2090 Fragaria x ananassa HOM05D001552 ORTHO05D003294 9.2e-21 104.4 201 42.3
Prupe.8G027900 Prunus persica HOM05D001552 ORTHO05D003294 7.8e-20 101.3 205 44.4
FAN15G1427 Fragaria x ananassa HOM05D001552 ORTHO05D003294 2.5e-18 96.3 201 47.3
MD05G1023200 Malus domestica HOM05D001552 ORTHO05D003294 4.3e-18 95.5 201 42.8
MD10G1024100 Malus domestica HOM05D001552 ORTHO05D003294 2.1e-17 93.2 203 41.9
CiPaw.15G017000 Carya illinoinensis HOM05D001552 ORTHO05D003294 2.4e-13 79.7 185 42.2
Thecc.01G142700 Theobroma cacao HOM05D001552 ORTHO05D003294 1.7e-11 73.6 200 37.0
CSS0002929 Camellia sinensis var. sinensis HOM05D001552 ORTHO05D003294 3.0e-11 72.8 195 36.4
AT1G76720 Arabidopsis thaliana HOM05D001552 ORTHO05D003294 1.5e-10 70.5 193 34.7
CsaV3_7G025160 Cucumis sativus L. HOM05D001552 ORTHO05D003294 1.5e-10 70.5 196 38.8
ClCG09G009640 Citrullus lanatus HOM05D001552 ORTHO05D003294 1.6e-09 67.0 196 37.2
CiPaw.16G013700 Carya illinoinensis HOM05D001552 ORTHO05D003294 2.8e-09 66.2 200 35.0
MELO3C023716.2 Cucumis melo HOM05D001552 ORTHO05D003294 2.8e-09 66.2 192 35.4
Sp5g31970 Schrenkiella parvula HOM05D001552 ORTHO05D003294 2.8e-09 66.2 164 37.2
THA.LOC104813715 Tarenaya hassleriana HOM05D001552 ORTHO05D003294 6.2e-09 65.1 194 36.6
Carub.0002s2359 Capsella rubella HOM05D001552 ORTHO05D003294 1.8e-08 63.5 185 38.4
Rhsim02G0210400 Rhododendron simsii HOM05D001552 ORTHO05D003294 1.8e-08 63.5 177 39.0
CARHR070350 Cardamine hirsuta HOM05D001552 ORTHO05D003294 4.0e-08 62.4 123 47.2
Lj9C478T4 Lonicera japonica HOM05D001552 ORTHO05D003294 4.0e-08 62.4 192 42.7
BcaB05g25013 Brassica carinata HOM05D001552 ORTHO05D003294 5.2e-08 62.0 123 41.5
Duzib147G0536 Durio zibethinus HOM05D001552 ORTHO05D003294 6.8e-08 61.6 185 33.5
Thhalv10018018m.g Eutrema salsugineum HOM05D001552 ORTHO05D003294 8.9e-08 61.2 129 38.8
Gohir.A04G138500 Gossypium hirsutum HOM05D001552 ORTHO05D003294 8.9e-08 61.2 194 41.2
CSS0040061 Camellia sinensis var. sinensis HOM05D001552 ORTHO05D003294 1.5e-07 60.5 177 43.5
Lalb_Chr06g0161531 Lupinus albus HOM05D001552 ORTHO05D003294 1.5e-07 60.5 188 35.1
Gorai.012G174700 Gossypium raimondii HOM05D001552 ORTHO05D003294 2.0e-07 60.1 192 40.6
Cc10_g14600 Coffea canephora HOM05D001552 ORTHO05D003294 2.6e-07 59.7 184 38.0
Potri.012G039200 Populus trichocarpa HOM05D001552 ORTHO05D003294 2.6e-07 59.7 194 36.1
Sabra12G0027700 Salix brachista HOM05D001552 ORTHO05D003294 4.4e-07 58.9 195 39.0
Carub.0002s2372 Capsella rubella HOM05D001552 ORTHO05D003294 5.8e-07 58.5 191 33.0
Gohir.D04G181400 Gossypium hirsutum HOM05D001552 ORTHO05D003294 5.8e-07 58.5 192 40.1
Thecc.01G143000 Theobroma cacao HOM05D001552 ORTHO05D003294 5.8e-07 58.5 199 34.2
Dinv25851 Davidia involucrata HOM05D001552 ORTHO05D003294 7.6e-07 58.2 184 41.3
Psat6g193320 Pisum sativum HOM05D001552 ORTHO05D003294 9.9e-07 57.8 179 36.3
AT1G76810 Arabidopsis thaliana HOM05D001552 ORTHO05D003294 1.7e-06 57.0 186 31.7
Sed0008952 Sechium edule HOM05D001552 ORTHO05D003294 1.7e-06 57.0 179 35.2
Dinv01061 Davidia involucrata HOM05D001552 ORTHO05D003294 2.9e-06 56.2 187 40.6
BcaC03g15705 Brassica carinata HOM05D001552 ORTHO05D003294 4.9e-06 55.5 151 37.7
A02p20910 Brassica napus HOM05D001552 ORTHO05D003294 4.9e-06 55.5 159 37.1
BolC2t09426H Brassica oleracea HOM05D001552 ORTHO05D003294 4.9e-06 55.5 151 37.7
BraA02t07123Z Brassica rapa HOM05D001552 ORTHO05D003294 4.9e-06 55.5 159 37.1
Manes.02G178500 Manihot esculenta HOM05D001552 ORTHO05D003294 4.9e-06 55.5 201 35.8


User provided reference genes

Program Settings