Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G0535 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.2e-187 659.8 358 100.0
FAN10G1689 Fragaria x ananassa HOM05D006889 ORTHO05D008614 3.6e-181 638.3 358 96.6
FAN10G2743 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.4e-180 636.3 358 96.4
FvH4_7g33430 Fragaria vesca HOM05D006889 ORTHO05D008614 6.9e-172 607.4 358 93.3
FAN01G0055 Fragaria x ananassa HOM05D006889 ORTHO05D008614 6.6e-167 590.9 338 95.6
RcHm_v2.0_Chr1g0383401 Rosa chinensis HOM05D006889 ORTHO05D008614 1.9e-166 589.3 359 90.3
Prupe.2G323000 Prunus persica HOM05D006889 ORTHO05D008614 2.8e-141 505.8 359 79.9
Eucgr.K00107 Eucalyptus grandis HOM05D006889 ORTHO05D008614 8.0e-120 434.5 358 69.3
MD07G1304400 Malus domestica HOM05D006889 ORTHO05D008614 3.9e-119 432.2 359 71.0
QL09p026702 Quercus lobata HOM05D006889 ORTHO05D008614 5.2e-119 431.8 358 68.4
Migut.F00816 Erythranthe guttata HOM05D006889 ORTHO05D008614 2.0e-118 429.9 352 69.6
Atru.chr12.2063 Acer truncatum HOM05D006889 ORTHO05D008614 9.7e-118 427.6 344 70.3
Ciclev10012044m.g Citrus clementina HOM05D006889 ORTHO05D008614 1.7e-117 426.8 343 71.4
Dinv25463 Davidia involucrata HOM05D006889 ORTHO05D008614 1.1e-116 424.1 346 68.5
Gohir.A06G144633 Gossypium hirsutum HOM05D006889 ORTHO05D008614 2.0e-115 419.9 358 67.9
Gorai.010G175600 Gossypium raimondii HOM05D006889 ORTHO05D008614 2.6e-115 419.5 354 68.4
TAR369G0178 Trochodendron aralioides HOM05D006889 ORTHO05D008614 2.6e-115 419.5 355 67.6
Manes.09G119000 Manihot esculenta HOM05D006889 ORTHO05D008614 3.8e-114 415.6 361 68.4
CSS0010313 Camellia sinensis var. sinensis HOM05D006889 ORTHO05D008614 1.1e-113 414.1 336 69.9
Thecc.06G017600 Theobroma cacao HOM05D006889 ORTHO05D008614 2.1e-112 409.8 346 68.5
GSVIVG01024467001 Vitis vinifera HOM05D006889 ORTHO05D008614 1.4e-111 407.1 347 66.9
Aa31LG5G21960 Aethionema arabicum HOM05D006889 ORTHO05D008614 2.3e-111 406.4 361 64.5
Haze_22241 Corylus avellana HOM05D006889 ORTHO05D008614 8.8e-111 404.4 360 67.5
TWI60G1635 Tripterygium wilfordii HOM05D006889 ORTHO05D008614 8.8e-111 404.4 360 66.1
Carub.0004s1859 Capsella rubella HOM05D006889 ORTHO05D008614 2.0e-110 403.3 353 64.6
AL4G32960 Arabidopsis lyrata HOM05D006889 ORTHO05D008614 3.3e-110 402.5 363 64.2
CiPaw.07G182100 Carya illinoinensis HOM05D006889 ORTHO05D008614 8.2e-109 397.9 333 70.3
Potri.001G412800 Populus trichocarpa HOM05D006889 ORTHO05D008614 1.1e-108 397.5 355 65.9
AT2G36740 Arabidopsis thaliana HOM05D006889 ORTHO05D008614 1.4e-108 397.1 363 63.6
Lalb_Chr13g0293181 Lupinus albus HOM05D006889 ORTHO05D008614 1.8e-108 396.7 348 66.1
THA.LOC104805469 Tarenaya hassleriana HOM05D006889 ORTHO05D008614 2.4e-108 396.4 362 63.3
Oeu033252.2 Olea europaea HOM05D006889 ORTHO05D008614 3.1e-108 396.0 399 61.2
Solyc04g009830.3 Solanum lycopersicum HOM05D006889 ORTHO05D008614 7.2e-105 384.8 358 61.5
Lj4g0013326 Lotus japonicus HOM05D006889 ORTHO05D008614 4.7e-104 382.1 346 63.9
Sopen04g004970 Solanum pennellii HOM05D006889 ORTHO05D008614 4.7e-104 382.1 359 61.6
ECA238G0057 Erigeron canadensis HOM05D006889 ORTHO05D008614 6.1e-104 381.7 374 59.9
Cc02_g09110 Coffea canephora HOM05D006889 ORTHO05D008614 8.0e-104 381.3 357 62.5
PSO384G0326 Papaver somniferum HOM05D006889 ORTHO05D008614 1.8e-103 380.2 370 60.3
A05p09120 Brassica napus HOM05D006889 ORTHO05D008614 4.0e-103 379.0 349 63.3
Nn6g34807 Nelumbo nucifera HOM05D006889 ORTHO05D008614 5.2e-103 378.6 363 62.8
BolC4t22783H Brassica oleracea HOM05D006889 ORTHO05D008614 6.8e-103 378.3 347 63.1
BraA05t19868Z Brassica rapa HOM05D006889 ORTHO05D008614 8.8e-103 377.9 349 63.0
Aqoxy4G02722 Aquilegia oxysepala HOM05D006889 ORTHO05D008614 2.6e-102 376.3 355 62.5
Cpa.g.sc140.53 Carica papaya HOM05D006889 ORTHO05D008614 4.4e-102 375.6 350 62.3
BcaC02g11793 Brassica carinata HOM05D006889 ORTHO05D008614 5.7e-102 375.2 347 62.5
BolC4t22767H Brassica oleracea HOM05D006889 ORTHO05D008614 5.7e-102 375.2 347 62.5
C04p11290 Brassica napus HOM05D006889 ORTHO05D008614 3.7e-101 372.5 347 62.2
MD07G1075300 Malus domestica HOM05D006889 ORTHO05D008614 1.1e-100 370.9 375 63.7
Glyma.05G136000 Glycine max HOM05D006889 ORTHO05D008614 4.5e-99 365.5 350 61.1
PGSC0003DMG400025437 Solanum tuberosum HOM05D006889 ORTHO05D008614 4.5e-99 365.5 380 57.9
CsaV3_5G005080 Cucumis sativus L. HOM05D006889 ORTHO05D008614 7.7e-99 364.8 342 62.0
SalBow3G4178 Salvia bowleyana HOM05D006889 ORTHO05D008614 7.7e-99 364.8 368 60.1
BcaB02g09334 Brassica carinata HOM05D006889 ORTHO05D008614 5.0e-98 362.1 350 60.3
CDE08G0956 Ceratophyllum demersum HOM05D006889 ORTHO05D008614 6.5e-98 361.7 348 60.9
PSO339G0304 Papaver somniferum HOM05D006889 ORTHO05D008614 8.6e-98 361.3 370 58.9
Phvul.002G186100 Phaseolus vulgaris HOM05D006889 ORTHO05D008614 8.6e-98 361.3 349 62.8
HanXRQChr07g0200571 Helianthus annuus HOM05D006889 ORTHO05D008614 1.5e-97 360.5 364 59.3
Sed0014561 Sechium edule HOM05D006889 ORTHO05D008614 1.5e-97 360.5 359 61.8
Sabra16G0274900 Salix brachista HOM05D006889 ORTHO05D008614 4.2e-97 359.0 372 59.7
Ca_18207_v3 Cicer arietinum L. HOM05D006889 ORTHO05D008614 7.2e-97 358.2 341 60.7
Hma1.2p1_0164F.1_g073300 Hydrangea macrophylla HOM05D006889 ORTHO05D008614 9.5e-97 357.8 295 69.8
Actinidia31405 Actinidia chinensis HOM05D006889 ORTHO05D008614 1.0e-95 354.4 313 66.1
vmacro10779 Vaccinium macrocarpon HOM05D006889 ORTHO05D008614 1.8e-95 353.6 347 62.8
Gohir.D06G150400 Gossypium hirsutum HOM05D006889 ORTHO05D008614 3.4e-94 349.4 287 69.0
Sabra16G0274600 Salix brachista HOM05D006889 ORTHO05D008614 3.4e-94 349.4 399 56.9
SGA_v2.0_scaffold62G21307 Striga asiatica HOM05D006889 ORTHO05D008614 2.8e-93 346.3 390 55.9
Sp4g19020 Schrenkiella parvula HOM05D006889 ORTHO05D008614 1.2e-91 340.9 349 57.6
Thhalv10016833m.g Eutrema salsugineum HOM05D006889 ORTHO05D008614 2.0e-91 340.1 357 57.1
Os08g0192400 Oryza sativa ssp. japonica HOM05D006889 ORTHO05D008614 3.5e-91 339.3 353 59.8
PGR142G0052 Punica granatum HOM05D006889 ORTHO05D008614 3.8e-90 335.9 364 57.1
Psat7g087400 Pisum sativum HOM05D006889 ORTHO05D008614 5.0e-90 335.5 343 58.9
HPP92_000052 Vanilla planifolia HOM05D006889 ORTHO05D008614 8.6e-90 334.7 343 59.5
Hund18033 Selenicereus undatus HOM05D006889 ORTHO05D008614 3.3e-89 332.8 373 56.8
MBI14_g11688_MAGBIO Magnolia biondii HOM05D006889 ORTHO05D008614 3.6e-88 329.3 359 58.2
arahy.Tifrunner.gnm1.ann1.T52I9D Arachis hypogaea HOM05D006889 ORTHO05D008614 1.7e-85 320.5 368 57.6
MSTRG.4328 Avicennia marina HOM05D006889 ORTHO05D008614 1.7e-85 320.5 348 58.3
Ah.14g084260 Amaranthus hybridus HOM05D006889 ORTHO05D008614 2.9e-85 319.7 352 54.5
Nitab4.5_0002651g0040 Nicotiana tabacum HOM05D006889 ORTHO05D008614 4.9e-85 318.9 356 57.3
CARHR131100 Cardamine hirsuta HOM05D006889 ORTHO05D008614 4.1e-84 315.8 352 55.1
unitig_747.g21800 Utricularia gibba HOM05D006889 ORTHO05D008614 3.9e-82 309.3 349 56.2
CAN.G186.71 Capsicum annuum HOM05D006889 ORTHO05D008614 5.0e-82 308.9 348 54.9
Sc08g0005450 Simmondsia chinensis HOM05D006889 ORTHO05D008614 4.3e-81 305.8 298 63.8
arahy.Tifrunner.gnm1.ann1.I4BD9U Arachis hypogaea HOM05D006889 ORTHO05D008614 1.6e-80 303.9 397 52.9
ATR0081G022 Amborella trichopoda HOM05D006889 ORTHO05D008614 3.1e-79 299.7 300 59.7
Zm00001eb260210 Zea mays HOM05D006889 ORTHO05D008614 2.0e-78 297.0 360 50.6
EL10Ac8g18884 Beta vulgaris HOM05D006889 ORTHO05D008614 4.6e-75 285.8 404 49.0
Nitab4.5_0000930g0060 Nicotiana tabacum HOM05D006889 ORTHO05D008614 4.6e-75 285.8 357 52.7
Rhsim09G0213900 Rhododendron simsii HOM05D006889 ORTHO05D008614 6.6e-74 282.0 380 51.1
Rhsim01G0067600 Rhododendron simsii HOM05D006889 ORTHO05D008614 3.1e-71 273.1 373 50.4
Lsat_1_v5_gn_2_107601 Lactuca sativa HOM05D006889 ORTHO05D008614 1.3e-66 257.7 359 49.3
MELO3C005447.2 Cucumis melo HOM05D006889 ORTHO05D008614 6.6e-66 255.4 261 61.3
Peaxi162Scf00135g00913 Petunia axillaris HOM05D006889 ORTHO05D008614 3.6e-64 249.6 315 50.5
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 6.2e-64 248.8 344 47.1
Pp3c14_17650 Physcomitrium patens HOM05D006889 ORTHO05D008614 9.6e-57 224.9 310 48.7
AUR62039766 Chenopodium quinoa HOM05D006889 ORTHO05D008614 7.6e-54 215.3 259 55.6
AUR62028393 Chenopodium quinoa HOM05D006889 ORTHO05D008614 1.7e-53 214.2 410 39.0
TPR.G11931 Trifolium pratense HOM05D006889 ORTHO05D008614 3.2e-52 209.9 343 45.5
SEGI_10499 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 1.6e-51 207.6 276 50.4
SMO165G0047 Selaginella moellendorffii HOM05D006889 ORTHO05D008614 3.5e-51 206.5 274 51.5
DCAR_030020 Daucus carota HOM05D006889 ORTHO05D008614 5.6e-49 199.1 273 48.4
COL.COLO4_31129 Corchorus olitorius HOM05D000112 ORTHO05D000564 1.2e-46 191.4 300 46.3
Gohir.D08G083500 Gossypium hirsutum HOM05D006889 ORTHO05D008614 2.0e-46 190.7 167 68.3
Mapoly0001s0482 Marchantia polymorpha HOM05D006889 ORTHO05D008614 3.4e-46 189.9 214 50.0
FAN28G2910 Fragaria x ananassa HOM05D006889 ORTHO05D008614 7.1e-44 182.2 137 78.8
CBR_g38961 Chara braunii HOM05D006889 ORTHO05D008614 1.6e-43 181.0 341 39.0
Gorai.004G087700 Gossypium raimondii HOM05D006889 ORTHO05D008614 6.7e-42 175.6 190 60.0
SEGI_12666 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 5.3e-39 166.0 148 56.1
TPR.G8913 Trifolium pratense HOM05D006889 ORTHO05D008614 5.8e-38 162.5 115 76.5
ClCG01G004860 Citrullus lanatus HOM05D006889 ORTHO05D008614 9.7e-25 118.6 192 47.9
SHI02511 Sapria himalayana HOM05D006889 ORTHO05D008614 9.4e-20 102.1 68 80.9
TPR.G34755 Trifolium pratense HOM05D006889 ORTHO05D008614 1.2e-19 101.7 62 83.9
Gorai.005G015000 Gossypium raimondii HOM05D004753 ORTHO05D005920 3.0e-18 97.1 168 45.2
Gohir.D02G011800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 3.9e-18 96.7 168 45.2
MCO15G439 Micromonas commoda HOM05D006889 ORTHO05D008614 1.8e-15 87.8 295 33.6
Cre17.g728200 Chlamydomonas reinhardtii HOM05D006889 ORTHO05D008614 8.5e-13 79.0 298 31.5
SHI02510 Sapria himalayana HOM05D006889 ORTHO05D008614 1.0e-10 72.0 36 88.9
SHI02512 Sapria himalayana HOM05D006889 ORTHO05D008614 1.5e-09 68.2 91 52.7
Gohir.D04G081932 Gossypium hirsutum HOM05D004753 ORTHO05D005920 7.4e-09 65.9 70 60.0
Cfa024449 Carpinus fangiana HOM05D006889 ORTHO05D008614 4.1e-07 60.1 70 45.7
PRCOL_00000609 Prasinoderma coloniale HOM05D006889 ORTHO05D008614 1.2e-06 58.5 280 28.2


User provided reference genes

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