Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G0297 Fragaria x ananassa HOM05D000017 ORTHO05D017008 3.0e-96 355.1 177 100.0
FvH4_2g02783 Fragaria vesca HOM05D000017 ORTHO05D000013 2.6e-63 245.7 183 70.5
FvH4_4g07822 Fragaria vesca HOM05D000017 ORTHO05D000013 3.2e-53 212.2 262 49.2
RcHm_v2.0_Chr5g0042901 Rosa chinensis HOM05D000017 ORTHO05D000013 3.2e-45 185.7 257 45.1
FvH4_5g06863 Fragaria vesca HOM05D000017 ORTHO05D017008 6.0e-44 181.4 217 49.8
FAN20G1340 Fragaria x ananassa HOM05D000017 ORTHO05D017008 1.5e-42 176.8 200 54.0
FvH4_5g03091 Fragaria vesca HOM05D000017 ORTHO05D000013 1.3e-41 173.7 245 46.5
FvH4_3g35812 Fragaria vesca HOM05D000017 ORTHO05D017008 2.4e-37 159.5 245 43.3
FAN22G2134 Fragaria x ananassa HOM05D000017 ORTHO05D017008 1.6e-36 156.8 251 42.6
FvH4_7g02154 Fragaria vesca HOM05D000017 ORTHO05D000013 1.6e-33 146.7 206 44.2
FAN08G0283 Fragaria x ananassa HOM05D000017 ORTHO05D000013 1.4e-29 133.7 222 43.2
FvH4_6g20107 Fragaria vesca HOM05D000017 ORTHO05D000013 3.3e-26 122.5 257 33.9
FvH4_1g29590 Fragaria vesca HOM05D000017 ORTHO05D025506 2.4e-24 116.3 180 40.0
FAN16G0370 Fragaria x ananassa HOM05D000017 ORTHO05D017008 6.5e-22 108.2 101 61.4
FvH4_7g07293 Fragaria vesca HOM05D000017 ORTHO05D017008 4.6e-20 102.1 92 63.0
FAN10G0137 Fragaria x ananassa HOM05D000017 ORTHO05D017008 2.3e-19 99.8 101 58.4
FvH4_5g24391 Fragaria vesca HOM05D000017 ORTHO05D000013 6.7e-19 98.2 197 36.0
FAN03G3074 Fragaria x ananassa HOM05D000017 ORTHO05D017008 1.5e-18 97.1 86 62.8
RcHm_v2.0_Chr3g0453251 Rosa chinensis HOM05D000017 ORTHO05D000013 4.1e-16 89.0 54 75.9
FAN28G1403 Fragaria x ananassa HOM05D000017 ORTHO05D017008 3.4e-15 85.9 70 60.0
FvH4_6g39681 Fragaria vesca HOM05D000017 ORTHO05D000013 9.3e-13 77.8 75 58.7
MD11G1161900 Malus domestica HOM05D000017 ORTHO05D000013 3.5e-12 75.9 81 46.9
MD12G1093400 Malus domestica HOM05D000017 ORTHO05D000013 6.1e-12 75.1 81 44.4
RcHm_v2.0_Chr7g0230091 Rosa chinensis HOM05D000017 ORTHO05D000013 1.8e-11 73.6 81 44.4
FAN21G3347 Fragaria x ananassa HOM05D000017 ORTHO05D025506 1.1e-10 70.9 141 40.4
RcHm_v2.0_Chr5g0038651 Rosa chinensis HOM05D000017 ORTHO05D000013 1.1e-10 70.9 81 43.2
FAN15G0386 Fragaria x ananassa HOM05D000017 ORTHO05D025506 4.3e-10 68.9 93 45.2
MD10G1135700 Malus domestica HOM05D000017 ORTHO05D000013 7.4e-10 68.2 88 42.0
RcHm_v2.0_Chr5g0043951 Rosa chinensis HOM05D000017 ORTHO05D000013 1.3e-09 67.4 81 40.7
FAN02G4146 Fragaria x ananassa HOM05D000017 ORTHO05D000013 2.2e-09 66.6 79 44.3
Hma1.2p1_0439F.1_g153280 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.7e-09 65.9 81 42.0
Hma1.2p1_0690F.1_g204040 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.3e-09 65.1 81 34.6
MD15G1409800 Malus domestica HOM05D000017 ORTHO05D000013 6.3e-09 65.1 88 39.8
Hma1.2p1_1280F.1_g272510 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 8.2e-09 64.7 81 40.7
Hma1.2p1_1640F.1_g295030 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.4e-08 63.9 81 40.7
Hma1.2p1_1145F.1_g261400 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.4e-08 63.2 91 36.3
FAN22G2377 Fragaria x ananassa HOM05D000017 ORTHO05D000013 3.1e-08 62.8 79 43.0
FAN27G2952 Fragaria x ananassa HOM05D008800 ORTHO05D010683 3.1e-08 62.8 79 43.0
Hma1.2p1_0080F.1_g042040 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.1e-08 62.8 81 40.7
Lj6C341T4 Lonicera japonica HOM05D000017 ORTHO05D000013 3.1e-08 62.8 81 38.3
Hma1.2p1_1001F.1_g246490 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.1e-08 62.4 81 39.5
Lj3C358G5 Lonicera japonica HOM05D000017 ORTHO05D000013 5.3e-08 62.0 81 38.3
Hma1.2p1_0036F.1_g023461 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.9e-08 61.6 81 35.8
Hma1.2p1_0357F.1_g134570 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.9e-08 61.6 83 38.6
Hma1.2p1_0357F.1_g134603 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.9e-08 61.6 83 37.3
Hma1.2p1_2603F.1_g325240 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.9e-08 61.6 81 35.8
Lj3P908T37 Lonicera japonica HOM05D000017 ORTHO05D000013 9.0e-08 61.2 81 37.0
FAN05G1418 Fragaria x ananassa HOM05D008800 ORTHO05D010683 1.2e-07 60.8 79 40.5
FAN01G2806 Fragaria x ananassa HOM05D008800 ORTHO05D010683 1.5e-07 60.5 79 40.5
Hma1.2p1_0399F.1_g144100 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.5e-07 60.5 81 32.1
FvH4_3g24443 Fragaria vesca HOM05D000017 ORTHO05D000013 2.0e-07 60.1 81 37.0
FAN28G0244 Fragaria x ananassa HOM05D000017 ORTHO05D000013 2.0e-07 60.1 103 48.5
Lj3P912T19 Lonicera japonica HOM05D000017 ORTHO05D000013 2.0e-07 60.1 81 34.6
RcHm_v2.0_Chr7g0220031 Rosa chinensis HOM05D000017 ORTHO05D000013 2.0e-07 60.1 77 41.6
FvH4_3g24442 Fragaria vesca HOM05D000017 ORTHO05D000013 2.6e-07 59.7 82 39.0
Hma1.2p1_0160F.1_g071000 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.6e-07 59.7 79 34.2
Hma1.2p1_0601F.1_g187270 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.6e-07 59.7 81 34.6
RcHm_v2.0_Chr4g0384731 Rosa chinensis HOM05D000017 ORTHO05D000013 3.4e-07 59.3 77 41.6
RcHm_v2.0_Chr6g0253561 Rosa chinensis HOM05D000017 ORTHO05D000013 3.4e-07 59.3 77 41.6
CSS0033759 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 4.5e-07 58.9 72 41.7
Lj3C48G2 Lonicera japonica HOM05D000017 ORTHO05D000013 5.9e-07 58.5 67 40.3
Lj7C243T2 Lonicera japonica HOM05D000017 ORTHO05D000013 5.9e-07 58.5 81 34.6
FvH4_3g44614 Fragaria vesca HOM05D000017 ORTHO05D000013 7.7e-07 58.2 115 33.0
Hma1.2p1_0267F.1_g107130 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 7.7e-07 58.2 83 34.9
Hma1.2p1_0281F.1_g113070 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 7.7e-07 58.2 83 34.9
Hma1.2p1_0446F.1_g154580 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 7.7e-07 58.2 83 34.9
Hma1.2p1_2510F.1_g323580 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.0e-06 57.8 83 34.9
Lj3C48T4 Lonicera japonica HOM05D000017 ORTHO05D000013 1.0e-06 57.8 81 34.6
FvH4_6g39191 Fragaria vesca HOM05D000017 ORTHO05D000013 1.3e-06 57.4 123 31.7
Hma1.2p1_0007F.1_g005210 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.3e-06 57.4 77 35.1
Lj9C96T4 Lonicera japonica HOM05D000017 ORTHO05D000013 1.3e-06 57.4 61 42.6
PSO384G4284 Papaver somniferum HOM05D000017 ORTHO05D000013 1.3e-06 57.4 94 34.0
FAN10G0088 Fragaria x ananassa HOM05D000017 ORTHO05D010683 1.7e-06 57.0 79 40.5
Hma1.2p1_0769F.1_g215850 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.7e-06 57.0 83 34.9
FAN16G2556 Fragaria x ananassa HOM05D000017 ORTHO05D000013 2.2e-06 56.6 79 39.2
FAN27G0239 Fragaria x ananassa HOM05D000017 ORTHO05D010683 2.2e-06 56.6 191 26.2
Hma1.2p1_0021F.1_g014373 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.9e-06 56.2 81 33.3
Hma1.2p1_0156F.1_g068760 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.9e-06 56.2 81 34.6
Lj5A553T10 Lonicera japonica HOM05D000017 ORTHO05D000013 2.9e-06 56.2 81 35.8
CSS0048426 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 3.8e-06 55.8 73 38.4
FAN25G1962 Fragaria x ananassa HOM05D000017 ORTHO05D010683 3.8e-06 55.8 79 39.2
Hma1.2p1_0098F.1_g048460 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.8e-06 55.8 81 33.3
Hma1.2p1_0823F.1_g224530 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.8e-06 55.8 81 33.3
FAN02G1424 Fragaria x ananassa HOM05D008800 ORTHO05D010683 5.0e-06 55.5 79 36.7
Hma1.2p1_0203F.1_g086210 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.0e-06 55.5 81 33.3
PSO761G0399 Papaver somniferum HOM05D000017 ORTHO05D000013 5.0e-06 55.5 81 34.6
CSS0014089 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 6.5e-06 55.1 72 38.9
FAN13G0802 Fragaria x ananassa HOM05D000017 ORTHO05D000013 6.5e-06 55.1 109 36.7
Hma1.2p1_0111F.1_g053550 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.5e-06 55.1 68 38.2
Hma1.2p1_0171F.1_g075720 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.5e-06 55.1 73 38.4
CSS0024251 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 8.5e-06 54.7 72 38.9
FvH4_3g24500 Fragaria vesca HOM05D008800 ORTHO05D010683 8.5e-06 54.7 190 24.7
Hma1.2p1_2194F.1_g316780 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 8.5e-06 54.7 83 32.5


User provided reference genes

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