Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G0274 Fragaria x ananassa HOM05D014733 ORTHO05D015653 2.0e-127 459.1 236 100.0
FAN14G3747 Fragaria x ananassa HOM05D014733 ORTHO05D015653 4.0e-120 434.9 259 89.2
FAN24G2521 Fragaria x ananassa HOM05D014733 ORTHO05D015653 3.9e-107 391.7 231 90.5
FAN11G1052 Fragaria x ananassa HOM05D014733 ORTHO05D015653 8.4e-86 320.9 236 77.5
FvH4_2g07270 Fragaria vesca HOM05D014733 ORTHO05D015653 2.7e-60 236.1 171 77.8
FvH4_4g14620 Fragaria vesca HOM05D014733 ORTHO05D015653 4.0e-35 152.5 93 87.1
FvH4_5g28200 Fragaria vesca HOM05D014733 ORTHO05D015653 4.6e-31 139.0 108 77.8
FAN14G1973 Fragaria x ananassa HOM05D002706 ORTHO05D045850 6.8e-27 125.2 86 70.9
FvH4_6g09050 Fragaria vesca HOM05D014733 ORTHO05D045850 1.5e-26 124.0 69 89.9
FAN17G2259 Fragaria x ananassa HOM05D002706 ORTHO05D015653 5.8e-26 122.1 162 53.7
FvH4_4g14310 Fragaria vesca HOM05D000431 ORTHO05D010836 3.2e-24 116.3 66 90.9
FvH4_7g06050 Fragaria vesca HOM05D014733 ORTHO05D015653 1.9e-21 107.1 59 93.2
FAN08G2603 Fragaria x ananassa HOM05D014733 ORTHO05D204938 1.9e-21 107.1 63 87.3
RcHm_v2.0_Chr5g0057181 Rosa chinensis HOM05D002706 ORTHO05D003253 1.6e-15 87.4 171 41.5
FAN04G0945 Fragaria x ananassa HOM05D002706 ORTHO05D003253 1.0e-14 84.7 182 37.4
FAN13G0625 Fragaria x ananassa HOM05D002706 ORTHO05D003253 1.0e-14 84.7 172 39.5
FAN18G2357 Fragaria x ananassa HOM05D002706 ORTHO05D003253 1.0e-14 84.7 194 37.1
FAN08G2484 Fragaria x ananassa HOM05D002706 ORTHO05D003253 1.3e-14 84.3 171 39.8
RcHm_v2.0_Chr7g0197611 Rosa chinensis HOM05D002706 ORTHO05D003253 1.7e-14 84.0 170 40.0
FvH4_5g02490 Fragaria vesca HOM05D002706 ORTHO05D003253 8.6e-14 81.6 171 39.2
FAN25G1989 Fragaria x ananassa HOM05D002706 ORTHO05D015653 1.1e-13 81.3 51 80.4
FAN09G2356 Fragaria x ananassa HOM05D002706 ORTHO05D003253 5.2e-11 72.4 177 34.5
arahy.Tifrunner.gnm1.ann1.0UMA9Y Arachis hypogaea HOM05D002706 ORTHO05D003253 6.8e-11 72.0 171 35.1
arahy.Tifrunner.gnm1.ann1.SSK3YK Arachis hypogaea HOM05D002706 ORTHO05D003253 6.8e-11 72.0 171 35.1
FAN05G3038 Fragaria x ananassa HOM05D002706 ORTHO05D003253 8.9e-11 71.6 177 33.9
Glyma.01G176800 Glycine max HOM05D002706 ORTHO05D003253 8.9e-11 71.6 175 35.4
Duzib160G0388 Durio zibethinus HOM05D002706 ORTHO05D003253 3.4e-10 69.7 171 35.1
FAN06G0175 Fragaria x ananassa HOM05D000528 ORTHO05D020566 3.4e-10 69.7 41 90.2
Ciclev10005105m.g Citrus clementina HOM05D002706 ORTHO05D003253 4.4e-10 69.3 172 34.3
ECA240G0438 Erigeron canadensis HOM05D002706 ORTHO05D003253 4.4e-10 69.3 171 35.1
Oeu026467.1 Olea europaea HOM05D002706 ORTHO05D003253 4.4e-10 69.3 171 35.7
GSVIVG01019752001 Vitis vinifera HOM05D002706 ORTHO05D003253 5.8e-10 68.9 171 35.1
CiPaw.11G135000 Carya illinoinensis HOM05D002706 ORTHO05D003253 7.6e-10 68.6 175 33.7
HanXRQChr10g0297421 Helianthus annuus HOM05D002706 ORTHO05D003253 7.6e-10 68.6 171 35.1
RcHm_v2.0_Chr2g0166361 Rosa chinensis HOM05D002706 ORTHO05D003253 7.6e-10 68.6 107 40.2
Manes.01G016300 Manihot esculenta HOM05D002706 ORTHO05D003253 9.9e-10 68.2 171 35.1
SGA_v2.0_scaffold181G39798 Striga asiatica HOM05D002706 ORTHO05D003253 9.9e-10 68.2 171 35.1
Solyc01g109360.3 Solanum lycopersicum HOM05D002706 ORTHO05D003253 1.3e-09 67.8 171 34.5
Sopen01g051550 Solanum pennellii HOM05D002706 ORTHO05D003253 1.3e-09 67.8 171 34.5
SGA_v2.0_scaffold73G24346 Striga asiatica HOM05D002706 ORTHO05D003253 1.3e-09 67.8 171 35.1
MELO3C005679.2 Cucumis melo HOM05D002706 ORTHO05D003253 1.7e-09 67.4 171 35.7
Glyma.11G065500 Glycine max HOM05D002706 ORTHO05D003253 1.7e-09 67.4 150 37.3
PGSC0003DMG400025166 Solanum tuberosum HOM05D002706 ORTHO05D003253 1.7e-09 67.4 171 34.5
Ca_29898_v3 Cicer arietinum L. HOM05D002706 ORTHO05D003253 2.9e-09 66.6 160 37.5
Nn1g04262 Nelumbo nucifera HOM05D002706 ORTHO05D003253 2.9e-09 66.6 171 34.5
Peaxi162Scf00111g00823 Petunia axillaris HOM05D002706 ORTHO05D003253 2.9e-09 66.6 171 34.5
Cpa.g.sc13.153 Carica papaya HOM05D002706 ORTHO05D003253 3.7e-09 66.2 170 35.3
Duzib192G0782 Durio zibethinus HOM05D002706 ORTHO05D003253 3.7e-09 66.2 171 34.5
Gohir.D05G115700 Gossypium hirsutum HOM05D002706 ORTHO05D003253 3.7e-09 66.2 171 33.9
Gorai.009G119700 Gossypium raimondii HOM05D002706 ORTHO05D003253 3.7e-09 66.2 171 33.9
MSTRG.6719 Avicennia marina HOM05D002706 ORTHO05D003253 4.9e-09 65.9 171 34.5
ECA234G1375 Erigeron canadensis HOM05D002706 ORTHO05D003253 4.9e-09 65.9 171 33.3
Eucgr.A00956 Eucalyptus grandis HOM05D002706 ORTHO05D003253 4.9e-09 65.9 171 33.3
Lsat_1_v5_gn_3_114641 Lactuca sativa HOM05D002706 ORTHO05D003253 4.9e-09 65.9 171 33.3
MD04G1034100 Malus domestica HOM05D002706 ORTHO05D003253 4.9e-09 65.9 171 33.9
CiPaw.12G092900 Carya illinoinensis HOM05D002706 ORTHO05D003253 6.4e-09 65.5 175 34.3
CsaV3_5G002780 Cucumis sativus L. HOM05D002706 ORTHO05D003253 6.4e-09 65.5 171 35.1
MD06G1084100 Malus domestica HOM05D002706 ORTHO05D003253 6.4e-09 65.5 171 33.9
PGR031G1433 Punica granatum HOM05D002706 ORTHO05D003253 6.4e-09 65.5 171 35.1
RcHm_v2.0_Chr6g0275951 Rosa chinensis HOM05D002706 ORTHO05D003253 6.4e-09 65.5 107 39.3
unitig_62.g23090 Utricularia gibba HOM05D002706 ORTHO05D003253 6.4e-09 65.5 171 35.7
CDE02G3904 Ceratophyllum demersum HOM05D002706 ORTHO05D003253 8.4e-09 65.1 171 34.5
ECA234G0431 Erigeron canadensis HOM05D002706 ORTHO05D003253 8.4e-09 65.1 87 46.0
Prupe.5G100500 Prunus persica HOM05D002706 ORTHO05D003253 8.4e-09 65.1 171 33.3
Thecc.06G055700 Theobroma cacao HOM05D002706 ORTHO05D003253 8.4e-09 65.1 171 33.3
vmacro12011 Vaccinium macrocarpon HOM05D002706 ORTHO05D003253 8.4e-09 65.1 172 34.3
CAN.G322.108 Capsicum annuum HOM05D002706 ORTHO05D003253 1.1e-08 64.7 171 33.9
Cc05_g10340 Coffea canephora HOM05D002706 ORTHO05D003253 1.1e-08 64.7 171 34.5
FAN16G2851 Fragaria x ananassa HOM05D002706 ORTHO05D015653 1.1e-08 64.7 33 90.9
Lj5g0021295 Lotus japonicus HOM05D002706 ORTHO05D003253 1.1e-08 64.7 171 33.3
RcHm_v2.0_Chr6g0257261 Rosa chinensis HOM05D002706 ORTHO05D003253 1.1e-08 64.7 107 38.3
Hund23521 Selenicereus undatus HOM05D002706 ORTHO05D003253 1.1e-08 64.7 171 33.9
CSS0035683 Camellia sinensis var. sinensis HOM05D002706 ORTHO05D003253 1.4e-08 64.3 171 33.9
CSS0045890 Camellia sinensis var. sinensis HOM05D002706 ORTHO05D003253 1.4e-08 64.3 171 33.9
CDE04G3144 Ceratophyllum demersum HOM05D002706 ORTHO05D003253 1.4e-08 64.3 171 34.5
ClCG01G002670 Citrullus lanatus HOM05D002706 ORTHO05D003253 1.4e-08 64.3 172 34.3
FAN12G4024 Fragaria x ananassa HOM05D000431 ORTHO05D010836 1.4e-08 64.3 33 100.0
Phvul.002G027700 Phaseolus vulgaris HOM05D002706 ORTHO05D003253 1.4e-08 64.3 175 33.1
Eucgr.K00934 Eucalyptus grandis HOM05D002706 ORTHO05D003253 1.9e-08 63.9 171 32.7
Hma1.2p1_0325F.1_g125930 Hydrangea macrophylla HOM05D002706 ORTHO05D003253 1.9e-08 63.9 171 33.3
Lalb_Chr06g0163611 Lupinus albus HOM05D002706 ORTHO05D003253 1.9e-08 63.9 172 35.5
Potri.010G248900 Populus trichocarpa HOM05D002706 ORTHO05D003253 1.9e-08 63.9 171 34.5
MSTRG.15013 Avicennia marina HOM05D002706 ORTHO05D003253 2.4e-08 63.5 171 33.3
Ca_26354_v3 Cicer arietinum L. HOM05D002706 ORTHO05D003253 2.4e-08 63.5 176 34.7
Psat6g116280 Pisum sativum HOM05D002706 ORTHO05D003253 2.4e-08 63.5 176 34.7
QL12p032909 Quercus lobata HOM05D002706 ORTHO05D003253 2.4e-08 63.5 176 34.1
TPR.G29099 Trifolium pratense HOM05D002706 ORTHO05D003253 2.4e-08 63.5 172 34.9
Medtr1g053270 Medicago truncatula HOM05D002706 ORTHO05D003253 3.2e-08 63.2 172 34.9
Sed0009702 Sechium edule HOM05D002706 ORTHO05D003253 3.2e-08 63.2 171 33.9
Sc01g0009590 Simmondsia chinensis HOM05D002706 ORTHO05D003253 3.2e-08 63.2 171 33.3
TAR626G1221 Trochodendron aralioides HOM05D002706 ORTHO05D003253 3.2e-08 63.2 146 36.3
Prupe.5G096900 Prunus persica HOM05D002706 ORTHO05D003253 4.1e-08 62.8 171 32.2
Lj1A816G36 Lonicera japonica HOM05D002706 ORTHO05D003253 5.4e-08 62.4 203 29.6
CSS0015343 Camellia sinensis var. sinensis HOM05D002706 ORTHO05D003253 7.1e-08 62.0 171 33.3
CSS0015711 Camellia sinensis var. sinensis HOM05D002706 ORTHO05D003253 7.1e-08 62.0 171 33.3
CSS0016628 Camellia sinensis var. sinensis HOM05D002706 ORTHO05D003253 7.1e-08 62.0 171 33.3
ECA232G2232 Erigeron canadensis HOM05D002706 ORTHO05D003253 7.1e-08 62.0 104 41.3
Sabra10G0193900 Salix brachista HOM05D002706 ORTHO05D003253 9.2e-08 61.6 171 33.9
Actinidia18846 Actinidia chinensis HOM05D002706 ORTHO05D003253 1.2e-07 61.2 171 33.9
FAN27G1235 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.2e-07 61.2 45 64.4
PSO528G0166 Papaver somniferum HOM05D002706 ORTHO05D003253 1.2e-07 61.2 171 32.7
QL10p062797 Quercus lobata HOM05D002706 ORTHO05D003253 1.2e-07 61.2 189 31.7
Sed0016965 Sechium edule HOM05D002706 ORTHO05D003253 1.2e-07 61.2 175 33.1
Ah.11g047900 Amaranthus hybridus HOM05D002706 ORTHO05D003253 1.6e-07 60.8 170 34.1
ATR0706G210 Amborella trichopoda HOM05D002706 ORTHO05D003253 1.6e-07 60.8 171 33.3
Thhalv10016782m.g Eutrema salsugineum HOM05D002706 ORTHO05D003253 1.6e-07 60.8 170 33.5
Lj5g0024819 Lotus japonicus HOM05D002706 ORTHO05D003253 1.6e-07 60.8 150 34.7
Atru.chr12.1398 Acer truncatum HOM05D002706 ORTHO05D003253 2.1e-07 60.5 188 30.9
Gohir.A05G115200 Gossypium hirsutum HOM05D002706 ORTHO05D003253 2.1e-07 60.5 146 35.6
MBI01_g16593_MAGBIO Magnolia biondii HOM05D002706 ORTHO05D003253 2.1e-07 60.5 174 33.3
PSO170G0959 Papaver somniferum HOM05D002706 ORTHO05D003253 2.1e-07 60.5 171 32.7
Prupe.7G166000 Prunus persica HOM05D000240 ORTHO05D001140 2.1e-07 60.5 49 67.3
vmacro17392 Vaccinium macrocarpon HOM05D002706 ORTHO05D003253 2.1e-07 60.5 140 39.3
Zm00001eb416340 Zea mays HOM05D002706 ORTHO05D003253 2.1e-07 60.5 171 34.5
AT2G33840 Arabidopsis thaliana HOM05D002706 ORTHO05D003253 2.7e-07 60.1 170 32.9
FAN26G0612 Fragaria x ananassa HOM05D000240 ORTHO05D001140 2.7e-07 60.1 50 68.0
Sc22g0005590 Simmondsia chinensis HOM05D002706 ORTHO05D003253 2.7e-07 60.1 172 33.7
vmacro17413 Vaccinium macrocarpon HOM05D002706 ORTHO05D003253 2.7e-07 60.1 155 38.7
Aqoxy5G03847 Aquilegia oxysepala HOM05D002706 ORTHO05D003253 3.5e-07 59.7 171 31.6
AL4G29620 Arabidopsis lyrata HOM05D002706 ORTHO05D003253 3.5e-07 59.7 170 32.9
Cfa015720 Carpinus fangiana HOM05D002706 ORTHO05D003253 3.5e-07 59.7 139 35.3
HanXRQChr03g0077621 Helianthus annuus HOM05D002706 ORTHO05D003253 3.5e-07 59.7 104 39.4
THA.LOC104812293 Tarenaya hassleriana HOM05D002706 ORTHO05D003253 3.5e-07 59.7 170 31.2
Ah.14g085530 Amaranthus hybridus HOM05D002706 ORTHO05D003253 6.0e-07 58.9 170 32.4
Nitab4.5_0001662g0040 Nicotiana tabacum HOM05D002706 ORTHO05D003253 7.8e-07 58.5 107 37.4
Nitab4.5_0002495g0060 Nicotiana tabacum HOM05D002706 ORTHO05D003253 7.8e-07 58.5 146 35.6
TWI32G0184 Tripterygium wilfordii HOM05D002706 ORTHO05D003253 7.8e-07 58.5 170 33.5
CANSAT80G1781 Cannabis sativa HOM05D002706 ORTHO05D003253 1.0e-06 58.2 170 31.2
Carub.0004s1552 Capsella rubella HOM05D002706 ORTHO05D003253 1.0e-06 58.2 170 32.4
FvH4_1g12070 Fragaria vesca HOM05D000240 ORTHO05D001140 1.0e-06 58.2 185 30.8
FAN19G0101 Fragaria x ananassa HOM05D000240 ORTHO05D001140 1.0e-06 58.2 185 30.8
COL.COLO4_31141 Corchorus olitorius HOM05D002706 ORTHO05D003253 1.3e-06 57.8 171 30.4
Manes.05G136800 Manihot esculenta HOM05D002706 ORTHO05D003253 1.3e-06 57.8 146 33.6
MCO11G552 Micromonas commoda HOM05D002706 ORTHO05D003253 1.3e-06 57.8 170 30.6
Nitab4.5_0004280g0080 Nicotiana tabacum HOM05D002706 ORTHO05D003253 1.3e-06 57.8 146 33.6
RcHm_v2.0_Chr2g0099691 Rosa chinensis HOM05D000240 ORTHO05D001140 1.3e-06 57.8 185 30.8
Zm00001eb172860 Zea mays HOM05D002706 ORTHO05D003253 1.3e-06 57.8 171 32.7
HanXRQChr03g0077631 Helianthus annuus HOM05D002706 ORTHO05D003253 1.7e-06 57.4 170 31.2
Rhsim05G0015300 Rhododendron simsii HOM05D002706 ORTHO05D003253 1.7e-06 57.4 171 34.5
HPP92_022522 Vanilla planifolia HOM05D002706 ORTHO05D003253 1.7e-06 57.4 171 33.9
Rhsim06G0185200 Rhododendron simsii HOM05D002706 ORTHO05D003253 2.3e-06 57.0 171 31.0
SEGI_02662 Sequoiadendron giganteum HOM05D002706 ORTHO05D003253 2.3e-06 57.0 146 34.2
MD00G1176100 Malus domestica HOM05D000240 ORTHO05D001140 3.0e-06 56.6 33 90.9
MD02G1110400 Malus domestica HOM05D000240 ORTHO05D001140 3.0e-06 56.6 71 52.1
MD02G1135300 Malus domestica HOM05D000240 ORTHO05D001140 3.0e-06 56.6 33 90.9
FAN01G2227 Fragaria x ananassa HOM05D002241 ORTHO05D002458 3.9e-06 56.2 57 64.9
FAN14G0008 Fragaria x ananassa HOM05D002706 ORTHO05D003253 3.9e-06 56.2 89 36.0
FAN23G1694 Fragaria x ananassa HOM05D000240 ORTHO05D001140 3.9e-06 56.2 185 30.3
Medtr1g007325 Medicago truncatula HOM05D002706 ORTHO05D003253 3.9e-06 56.2 163 30.7
Sabra08G0006100 Salix brachista HOM05D002706 ORTHO05D003253 3.9e-06 56.2 107 38.3
Solyc02g062330.3 Solanum lycopersicum HOM05D000240 ORTHO05D001140 3.9e-06 56.2 64 42.2
Sopen02g013320 Solanum pennellii HOM05D000240 ORTHO05D001140 3.9e-06 56.2 64 42.2
PGSC0003DMG400012011 Solanum tuberosum HOM05D000240 ORTHO05D001140 3.9e-06 56.2 64 42.2
FvH4_6g47330 Fragaria vesca HOM05D002706 ORTHO05D003253 5.1e-06 55.8 89 36.0
HanXRQChr05g0132181 Helianthus annuus HOM05D002706 ORTHO05D003253 5.1e-06 55.8 152 35.5
TPR.G14321 Trifolium pratense HOM05D002706 ORTHO05D003253 5.1e-06 55.8 197 32.0
TPR.G14339 Trifolium pratense HOM05D002706 ORTHO05D003253 5.1e-06 55.8 167 30.5
CSS0000203 Camellia sinensis var. sinensis HOM05D002706 ORTHO05D003253 8.6e-06 55.1 107 36.4


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