Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G0231 Fragaria x ananassa HOM05D013717 ORTHO05D009918 2.3e-83 312.4 180 100.0
FAN10G3359 Fragaria x ananassa HOM05D013717 ORTHO05D009918 7.9e-76 287.3 182 95.6
FAN06G2608 Fragaria x ananassa HOM05D013717 ORTHO05D009918 6.7e-75 284.3 180 95.0
FAN01G0488 Fragaria x ananassa HOM05D013717 ORTHO05D009918 2.4e-72 275.8 183 92.9
FAN10G3789 Fragaria x ananassa HOM05D013717 ORTHO05D009918 2.3e-67 259.2 162 95.7
RcHm_v2.0_Chr1g0360901 Rosa chinensis HOM05D013717 ORTHO05D009918 7.5e-42 174.5 162 71.0
Prupe.2G196100 Prunus persica HOM05D013717 ORTHO05D009918 5.7e-26 121.7 168 55.4
CANSAT56G3323 Cannabis sativa HOM05D013717 ORTHO05D009918 2.0e-18 96.7 168 50.6
Cfa004661 Carpinus fangiana HOM05D008433 ORTHO05D009918 2.9e-17 92.8 161 42.2
CANSAT56G2967 Cannabis sativa HOM05D013717 ORTHO05D009918 2.0e-15 86.7 167 47.9
TWI14G1180 Tripterygium wilfordii HOM05D008433 ORTHO05D009918 1.3e-14 84.0 162 42.6
Aa31LG1G28120 Aethionema arabicum HOM05D008433 ORTHO05D009918 2.8e-12 76.3 89 50.6
BcaB06g29468 Brassica carinata HOM05D008433 ORTHO05D009918 3.6e-12 75.9 135 39.3
BcaC02g07009 Brassica carinata HOM05D008433 ORTHO05D009918 3.6e-12 75.9 135 39.3
CiPaw.01G081400 Carya illinoinensis HOM05D008433 ORTHO05D009918 1.8e-11 73.6 150 38.0
Thhalv10001667m.g Eutrema salsugineum HOM05D008433 ORTHO05D009918 2.3e-11 73.2 87 49.4
A04p34600 Brassica napus HOM05D008433 ORTHO05D009918 4.0e-11 72.4 136 38.2
BraA04t18918Z Brassica rapa HOM05D008433 ORTHO05D009918 4.0e-11 72.4 136 38.2
Cpa.g.sc141.14 Carica papaya HOM05D008433 ORTHO05D009918 4.0e-11 72.4 156 35.9
Duzib138G0947 Durio zibethinus HOM05D008433 ORTHO05D009918 8.9e-11 71.2 82 47.6
BcaC02g07007 Brassica carinata HOM05D008433 ORTHO05D009918 1.5e-10 70.5 136 37.5
Thecc.01G334700 Theobroma cacao HOM05D008433 ORTHO05D009918 1.5e-10 70.5 160 36.2
Actinidia28092 Actinidia chinensis HOM05D013717 ORTHO05D009918 2.6e-10 69.7 183 38.3
Hma1.2p1_1697F.1_g298100 Hydrangea macrophylla HOM05D008433 ORTHO05D009918 2.6e-10 69.7 118 34.7
AL4G46200 Arabidopsis lyrata HOM05D008433 ORTHO05D009918 4.4e-10 68.9 183 32.2
Manes.05G017500 Manihot esculenta HOM05D008433 ORTHO05D009918 4.4e-10 68.9 166 36.7
Oeu046652.1 Olea europaea HOM05D008433 ORTHO05D009918 4.4e-10 68.9 82 45.1
TAR629G1417 Trochodendron aralioides HOM05D008433 ORTHO05D009918 7.5e-10 68.2 184 34.8
AT2G46735 Arabidopsis thaliana HOM05D008433 ORTHO05D009918 9.8e-10 67.8 182 33.0
AUR62022666 Chenopodium quinoa HOM05D008433 ORTHO05D009918 9.8e-10 67.8 171 32.7
Lj1g0005818 Lotus japonicus HOM05D008433 ORTHO05D009918 1.3e-09 67.4 83 49.4
Gohir.D11G104900 Gossypium hirsutum HOM05D008433 ORTHO05D009918 3.7e-09 65.9 85 41.2
Gorai.007G112200 Gossypium raimondii HOM05D008433 ORTHO05D009918 3.7e-09 65.9 85 41.2
TPR.G22611 Trifolium pratense HOM05D008433 ORTHO05D009918 4.9e-09 65.5 137 34.3
C04p72390 Brassica napus HOM05D008433 ORTHO05D009918 6.4e-09 65.1 183 33.9
BolC4t28725H Brassica oleracea HOM05D008433 ORTHO05D009918 6.4e-09 65.1 183 33.9
Potri.002G178100 Populus trichocarpa HOM05D008433 ORTHO05D009918 6.4e-09 65.1 166 34.9
Sabra02G0135500 Salix brachista HOM05D008433 ORTHO05D009918 1.9e-08 63.5 175 33.1
Nitab4.5_0003094g0050 Nicotiana tabacum HOM05D018587 ORTHO05D009918 2.4e-08 63.2 90 46.7
Gohir.A11G100200 Gossypium hirsutum HOM05D008433 ORTHO05D009918 3.2e-08 62.8 85 40.0
Carub.0004s2944 Capsella rubella HOM05D008433 ORTHO05D009918 4.1e-08 62.4 84 44.0
Rhsim01G0179000 Rhododendron simsii HOM05D008433 ORTHO05D009918 4.1e-08 62.4 195 30.3
MBI12_g42093_MAGBIO Magnolia biondii HOM05D008433 ORTHO05D009918 5.4e-08 62.0 162 36.4
AUR62004552 Chenopodium quinoa HOM05D008433 ORTHO05D009918 7.0e-08 61.6 184 29.9
Ah.05g179030 Amaranthus hybridus HOM05D008433 ORTHO05D009918 1.6e-07 60.5 172 31.4
ECA236G4657 Erigeron canadensis HOM05D000145 ORTHO05D000115 2.7e-07 59.7 80 46.2
Nn1g00412 Nelumbo nucifera HOM05D033573 ORTHO05D009918 2.7e-07 59.7 82 46.3
Migut.B01918 Erythranthe guttata HOM05D013717 ORTHO05D009918 4.6e-07 58.9 162 34.6
A05p01070 Brassica napus HOM05D000145 ORTHO05D013968 1.0e-06 57.8 183 30.1
BraA05t19107Z Brassica rapa HOM05D000145 ORTHO05D013968 1.0e-06 57.8 183 30.1
Sed0019953 Sechium edule HOM05D029570 ORTHO05D009918 1.0e-06 57.8 172 33.1
BcaNung03892 Brassica carinata HOM05D008433 ORTHO05D009918 1.3e-06 57.4 87 41.4
BolC4t21776H Brassica oleracea HOM05D000145 ORTHO05D013968 1.3e-06 57.4 183 29.5
CARHR142080 Cardamine hirsuta HOM05D008433 ORTHO05D009918 1.3e-06 57.4 182 32.4
Nitab4.5_0002053g0010 Nicotiana tabacum HOM05D018587 ORTHO05D009918 1.3e-06 57.4 84 41.7
Psat3g000840 Pisum sativum HOM05D008433 ORTHO05D009918 3.0e-06 56.2 141 31.9
Oeu015062.1 Olea europaea HOM05D008433 ORTHO05D009918 3.9e-06 55.8 85 40.0
PGR031G3198 Punica granatum HOM05D008433 ORTHO05D009918 3.9e-06 55.8 163 30.7
Peaxi162Scf00087g00044 Petunia axillaris HOM05D018587 ORTHO05D009918 5.0e-06 55.5 80 43.8
ClCG06G002750 Citrullus lanatus HOM05D029570 ORTHO05D009918 6.6e-06 55.1 169 29.0
Glyma.19G259100 Glycine max HOM05D008433 ORTHO05D009918 6.6e-06 55.1 129 31.8


User provided reference genes

Program Settings