Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G0228 Fragaria x ananassa HOM05D008930 ORTHO05D011101 1.0e-54 216.5 106 100.0
FAN10G1542 Fragaria x ananassa HOM05D008930 ORTHO05D011101 5.5e-53 210.7 106 98.1
FvH4_7g33090 Fragaria vesca HOM05D008930 ORTHO05D011101 7.2e-53 210.3 106 98.1
FAN10G0670 Fragaria x ananassa HOM05D008930 ORTHO05D011101 6.1e-52 207.2 106 97.2
Prupe.2G320800 Prunus persica HOM05D008930 ORTHO05D011101 5.4e-32 141.0 103 66.0
CiPaw.05G207300 Carya illinoinensis HOM05D008930 ORTHO05D011101 5.6e-29 131.0 101 62.4
Haze_00319 Corylus avellana HOM05D008930 ORTHO05D011101 1.2e-28 129.8 100 64.0
QL09p006519 Quercus lobata HOM05D008930 ORTHO05D011101 6.8e-27 124.0 102 59.8
TAR374G0067 Trochodendron aralioides HOM05D008930 ORTHO05D011101 1.5e-26 122.9 101 60.4
Rhsim03G0217200 Rhododendron simsii HOM05D008930 ORTHO05D011101 2.9e-25 118.6 99 61.6
Hma1.2p1_0415F.1_g148300 Hydrangea macrophylla HOM05D008930 ORTHO05D011101 3.7e-25 118.2 95 61.1
Hma1.2p1_1867F.1_g305920 Hydrangea macrophylla HOM05D008930 ORTHO05D011101 3.7e-25 118.2 95 61.1
Hma1.2p1_0115F.1_g055620 Hydrangea macrophylla HOM05D008930 ORTHO05D011101 8.3e-25 117.1 95 60.0
Nn3g18757 Nelumbo nucifera HOM05D008930 ORTHO05D011101 4.1e-24 114.8 100 59.0
Thecc.03G210900 Theobroma cacao HOM05D008930 ORTHO05D011101 1.2e-23 113.2 101 61.4
Aqoxy5G04368 Aquilegia oxysepala HOM05D008930 ORTHO05D011101 2.0e-23 112.5 89 57.3
PGSC0003DMG400027103 Solanum tuberosum HOM05D008930 ORTHO05D011101 2.0e-23 112.5 90 58.9
CAN.G65.147 Capsicum annuum HOM05D008930 ORTHO05D011101 2.7e-23 112.1 92 56.5
Lsat_1_v5_gn_8_3980 Lactuca sativa HOM05D008930 ORTHO05D011101 6.0e-23 110.9 102 52.9
MBI04_g38995_MAGBIO Magnolia biondii HOM05D008930 ORTHO05D011101 1.0e-22 110.2 99 53.5
Sopen06g029390 Solanum pennellii HOM05D008930 ORTHO05D011101 1.7e-22 109.4 89 57.3
Actinidia34280 Actinidia chinensis HOM05D008930 ORTHO05D011101 3.9e-22 108.2 97 56.7
MBI04_g27767_MAGBIO Magnolia biondii HOM05D008930 ORTHO05D011101 5.0e-22 107.8 95 52.6
Oeu031968.1 Olea europaea HOM05D008930 ORTHO05D011101 3.3e-21 105.1 103 51.5
vmacro06460 Vaccinium macrocarpon HOM05D008930 ORTHO05D011101 3.3e-21 105.1 103 52.4
DCAR_010565 Daucus carota HOM05D008930 ORTHO05D011101 1.6e-20 102.8 97 53.6
AUR62028105 Chenopodium quinoa HOM05D008930 ORTHO05D011101 4.7e-20 101.3 96 51.0
AUR62005961 Chenopodium quinoa HOM05D008930 ORTHO05D011101 1.8e-19 99.4 89 53.9
ATR0332G067 Amborella trichopoda HOM05D008930 ORTHO05D011101 1.5e-18 96.3 93 52.7
MBI12_g45761_MAGBIO Magnolia biondii HOM05D008930 ORTHO05D011101 2.6e-18 95.5 85 52.9
Potri.015G004300 Populus trichocarpa HOM05D008930 ORTHO05D011101 4.4e-18 94.7 92 52.2
Peaxi162Scf00815g10012 Petunia axillaris HOM05D008930 ORTHO05D011101 9.8e-18 93.6 80 53.8
CANSAT21G0615 Cannabis sativa HOM05D008930 ORTHO05D011101 1.3e-17 93.2 85 54.1
Solyc06g073040.1 Solanum lycopersicum HOM05D008930 ORTHO05D011101 6.4e-17 90.9 75 56.0
Nitab4.5_0000115g0120 Nicotiana tabacum HOM05D008930 ORTHO05D011101 2.4e-16 89.0 76 56.6
Sabra15G0002900 Salix brachista HOM05D008930 ORTHO05D011101 3.2e-16 88.6 98 50.0
MSTRG.8597 Avicennia marina HOM05D008930 ORTHO05D011101 9.2e-16 87.0 95 52.6
Nitab4.5_0003561g0020 Nicotiana tabacum HOM05D008930 ORTHO05D011101 2.1e-15 85.9 76 53.9
AagrBONN_evm.TU.Sc2ySwM_228.3088 Anthoceros agrestis HOM05D000401 ORTHO05D000252 1.7e-09 66.2 89 39.3
SMO347G0570 Selaginella moellendorffii HOM05D001000 ORTHO05D011101 4.9e-09 64.7 97 35.1
Mapoly0142s0001 Marchantia polymorpha HOM05D000401 ORTHO05D000252 7.1e-08 60.8 71 42.3
Phvul.005G171200 Phaseolus vulgaris HOM05D005698 ORTHO05D007022 2.1e-07 59.3 77 37.7
Sabra05G0102800 Salix brachista HOM05D000401 ORTHO05D000252 3.5e-07 58.5 98 34.7
Oeu037890.1 Olea europaea HOM05D000401 ORTHO05D000252 4.6e-07 58.2 73 39.7
Haze_24454 Corylus avellana HOM05D000401 ORTHO05D000252 6.0e-07 57.8 61 44.3
Duzib147G1137 Durio zibethinus HOM05D000401 ORTHO05D000252 7.8e-07 57.4 75 36.0
SMO340G0153 Selaginella moellendorffii HOM05D000401 ORTHO05D000252 7.8e-07 57.4 53 47.2
Potri.007G028000 Populus trichocarpa HOM05D000401 ORTHO05D000252 1.3e-06 56.6 94 35.1
QL06p045539 Quercus lobata HOM05D000401 ORTHO05D000252 1.3e-06 56.6 73 38.4
SEGI_33718 Sequoiadendron giganteum HOM05D001000 ORTHO05D001896 1.3e-06 56.6 65 36.9
THA.LOC104813559 Tarenaya hassleriana HOM05D005698 ORTHO05D007022 1.3e-06 56.6 86 34.9
Aa31LG4G270 Aethionema arabicum HOM05D005698 ORTHO05D007022 1.7e-06 56.2 93 33.3
CiPaw.01G035600 Carya illinoinensis HOM05D000401 ORTHO05D000252 1.7e-06 56.2 73 38.4
CiPaw.13G065000 Carya illinoinensis HOM05D000401 ORTHO05D000252 1.7e-06 56.2 60 43.3
ClCG07G009070 Citrullus lanatus HOM05D000401 ORTHO05D000252 1.7e-06 56.2 79 35.4
Duzib093G0240 Durio zibethinus HOM05D000401 ORTHO05D000252 1.7e-06 56.2 71 36.6
Manes.01G133500 Manihot esculenta HOM05D000401 ORTHO05D000252 1.7e-06 56.2 93 36.6
Nitab4.5_0003068g0070 Nicotiana tabacum HOM05D000401 ORTHO05D000252 1.7e-06 56.2 90 32.2
AagrBONN_evm.TU.Sc2ySwM_228.2870 Anthoceros agrestis HOM05D000401 ORTHO05D000252 2.3e-06 55.8 100 35.0
Duzib264G0037 Durio zibethinus HOM05D000401 ORTHO05D000252 2.3e-06 55.8 72 37.5
Nitab4.5_0001466g0080 Nicotiana tabacum HOM05D000401 ORTHO05D000252 2.3e-06 55.8 73 34.2
Solyc03g034100.4 Solanum lycopersicum HOM05D000401 ORTHO05D000252 2.3e-06 55.8 73 34.2
Solyc05g055220.1 Solanum lycopersicum HOM05D001000 ORTHO05D001896 2.3e-06 55.8 64 40.6
Sopen03g006880 Solanum pennellii HOM05D000401 ORTHO05D000252 2.3e-06 55.8 73 34.2
Sopen05g033660 Solanum pennellii HOM05D001000 ORTHO05D001896 2.3e-06 55.8 64 40.6
CANSAT01G1343 Cannabis sativa HOM05D000401 ORTHO05D000252 3.0e-06 55.5 73 37.0
Lj2A449T51 Lonicera japonica HOM05D000401 ORTHO05D000252 3.0e-06 55.5 73 37.0
Lj1g0008429 Lotus japonicus HOM05D000401 ORTHO05D000252 3.0e-06 55.5 61 42.6
Manes.09G048800 Manihot esculenta HOM05D001000 ORTHO05D001896 3.0e-06 55.5 64 40.6
vmacro02887 Vaccinium macrocarpon HOM05D000401 ORTHO05D000252 3.0e-06 55.5 61 44.3
Cfa011818 Carpinus fangiana HOM05D000401 ORTHO05D000252 3.9e-06 55.1 61 42.6
ECA246G0887 Erigeron canadensis HOM05D000401 ORTHO05D000252 3.9e-06 55.1 73 37.0
Manes.16G038730 Manihot esculenta HOM05D000401 ORTHO05D000252 3.9e-06 55.1 58 43.1
Nitab4.5_0002759g0040 Nicotiana tabacum HOM05D000401 ORTHO05D000252 3.9e-06 55.1 60 46.7
Prupe.7G152000 Prunus persica HOM05D000401 ORTHO05D000252 3.9e-06 55.1 93 33.3
PGSC0003DMG400023395 Solanum tuberosum HOM05D001000 ORTHO05D001896 3.9e-06 55.1 64 39.1
SGA_v2.0_scaffold120G32981 Striga asiatica HOM05D000401 ORTHO05D000252 3.9e-06 55.1 61 42.6
HPP92_023653 Vanilla planifolia HOM05D000401 ORTHO05D000252 3.9e-06 55.1 66 40.9
arahy.Tifrunner.gnm1.ann1.PGK53K Arachis hypogaea HOM05D000401 ORTHO05D000252 5.1e-06 54.7 74 39.2
Rhsim13G0060700 Rhododendron simsii HOM05D000401 ORTHO05D000252 5.1e-06 54.7 61 44.3
Sabra07G0024300 Salix brachista HOM05D000401 ORTHO05D000252 5.1e-06 54.7 94 34.0
PGSC0003DMG400017788 Solanum tuberosum HOM05D000401 ORTHO05D000252 5.1e-06 54.7 73 34.2
GSVIVG01009691001 Vitis vinifera HOM05D000401 ORTHO05D000252 5.1e-06 54.7 73 34.2
Mapoly0170s0026 Marchantia polymorpha HOM05D000401 ORTHO05D000252 6.6e-06 54.3 71 39.4
Nitab4.5_0001827g0120 Nicotiana tabacum HOM05D000401 ORTHO05D000252 6.6e-06 54.3 73 35.6
Oeu002971.1 Olea europaea HOM05D000401 ORTHO05D000252 6.6e-06 54.3 73 35.6
QL01p025102 Quercus lobata HOM05D000401 ORTHO05D000252 6.6e-06 54.3 74 39.2
SalBow5G4271 Salvia bowleyana HOM05D000401 ORTHO05D000252 6.6e-06 54.3 73 35.6
TAR383G0966 Trochodendron aralioides HOM05D000401 ORTHO05D000252 6.6e-06 54.3 106 33.0
TAR636G0381 Trochodendron aralioides HOM05D001000 ORTHO05D002976 6.6e-06 54.3 88 31.8
MELO3C017554.2 Cucumis melo HOM05D000401 ORTHO05D000252 8.6e-06 53.9 79 32.9
CsaV3_4G005140 Cucumis sativus L. HOM05D000401 ORTHO05D000252 8.6e-06 53.9 79 32.9
Gohir.D03G015900 Gossypium hirsutum HOM05D000401 ORTHO05D000252 8.6e-06 53.9 75 37.3
Gorai.003G016100 Gossypium raimondii HOM05D000401 ORTHO05D000252 8.6e-06 53.9 75 37.3
Nitab4.5_0004721g0060 Nicotiana tabacum HOM05D000401 ORTHO05D000252 8.6e-06 53.9 105 28.6
Os05g0477200 Oryza sativa ssp. japonica HOM05D000401 ORTHO05D000252 8.6e-06 53.9 89 34.8
Peaxi162Scf00239g00023 Petunia axillaris HOM05D000401 ORTHO05D000252 8.6e-06 53.9 60 43.3
TWI09G1341 Tripterygium wilfordii HOM05D000401 ORTHO05D000252 8.6e-06 53.9 102 31.4


User provided reference genes

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