Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G0153 Fragaria x ananassa HOM05D000966 ORTHO05D007323 8.7e-157 557.0 294 100.0
FAN01G0621 Fragaria x ananassa HOM05D000966 ORTHO05D007323 4.3e-148 528.1 317 90.2
RcHm_v2.0_Chr1g0329491 Rosa chinensis HOM05D000966 ORTHO05D007323 1.5e-124 449.9 261 90.8
Prupe.8G038500 Prunus persica HOM05D000966 ORTHO05D007323 9.5e-95 350.9 260 77.3
MD05G1031500 Malus domestica HOM05D000966 ORTHO05D007323 2.2e-91 339.7 248 77.4
QL02p038471 Quercus lobata HOM05D000966 ORTHO05D007323 2.1e-78 296.6 265 64.9
CiPaw.15G013800 Carya illinoinensis HOM05D000966 ORTHO05D007323 3.6e-78 295.8 265 63.8
Sabra05G0148900 Salix brachista HOM05D000966 ORTHO05D007323 3.6e-78 295.8 294 57.8
Cfa018294 Carpinus fangiana HOM05D000966 ORTHO05D007323 4.7e-78 295.4 263 64.6
Potri.005G195400 Populus trichocarpa HOM05D000966 ORTHO05D007323 1.1e-77 294.3 264 62.1
TWI34G1291 Tripterygium wilfordii HOM05D000966 ORTHO05D007323 1.9e-74 283.5 259 64.1
TAR381G1161 Trochodendron aralioides HOM05D000966 ORTHO05D007323 4.1e-74 282.3 268 61.6
Atru.chr13.2052 Acer truncatum HOM05D000966 ORTHO05D007323 9.2e-74 281.2 264 63.3
Cpa.g.sc49.86 Carica papaya HOM05D000966 ORTHO05D007323 9.2e-74 281.2 265 60.8
Gorai.010G131600 Gossypium raimondii HOM05D000966 ORTHO05D007323 5.1e-72 275.4 267 58.4
Manes.12G141700 Manihot esculenta HOM05D000966 ORTHO05D007323 5.1e-72 275.4 264 60.6
Gohir.D06G115100 Gossypium hirsutum HOM05D000966 ORTHO05D007323 8.6e-72 274.6 267 58.1
Ciclev10000952m.g Citrus clementina HOM05D000966 ORTHO05D007323 1.5e-71 273.9 253 63.2
Gohir.A06G111200 Gossypium hirsutum HOM05D000966 ORTHO05D007323 2.5e-71 273.1 266 58.3
Duzib116G0132 Durio zibethinus HOM05D000966 ORTHO05D007323 4.3e-71 272.3 265 57.7
Thecc.08G157600 Theobroma cacao HOM05D000966 ORTHO05D007323 5.2e-69 265.4 265 58.5
Ca_10671_v3 Cicer arietinum L. HOM05D000966 ORTHO05D007323 6.4e-67 258.5 261 58.6
Lalb_Chr02g0141501 Lupinus albus HOM05D000966 ORTHO05D007323 5.4e-66 255.4 271 56.5
Phvul.007G082400 Phaseolus vulgaris HOM05D000966 ORTHO05D007323 1.7e-64 250.4 258 56.2
Psat6g191160 Pisum sativum HOM05D000966 ORTHO05D007323 1.7e-64 250.4 261 57.9
VMungo0720G0673 Vigna mungo HOM05D000966 ORTHO05D007323 1.7e-64 250.4 258 56.2
Sed0009464 Sechium edule HOM05D000966 ORTHO05D007323 2.3e-64 250.0 267 54.7
ClCG08G008820 Citrullus lanatus HOM05D000966 ORTHO05D007323 3.0e-64 249.6 268 55.2
MELO3C008329.2 Cucumis melo HOM05D000966 ORTHO05D007323 8.7e-64 248.1 268 53.7
arahy.Tifrunner.gnm1.ann1.Z2GQ5K Arachis hypogaea HOM05D000966 ORTHO05D007323 1.1e-63 247.7 262 56.9
Haze_17793 Corylus avellana HOM05D000966 ORTHO05D007323 1.5e-63 247.3 364 47.0
CANSAT25G2301 Cannabis sativa HOM05D000966 ORTHO05D007323 1.9e-63 246.9 262 55.3
CsaV3_6G005070 Cucumis sativus L. HOM05D000966 ORTHO05D007323 9.6e-63 244.6 268 54.9
arahy.Tifrunner.gnm1.ann1.83HUSC Arachis hypogaea HOM05D000966 ORTHO05D007323 1.3e-62 244.2 262 56.5
Lj5g0028132 Lotus japonicus HOM05D000966 ORTHO05D007323 6.2e-62 241.9 261 55.2
PSO170G0768 Papaver somniferum HOM05D000966 ORTHO05D007323 2.4e-61 240.0 273 53.5
Nn3g18699 Nelumbo nucifera HOM05D000966 ORTHO05D007323 3.1e-61 239.6 260 56.5
Glyma.20G168900 Glycine max HOM05D000966 ORTHO05D007323 4.0e-61 239.2 258 55.8
Glyma.10G222800 Glycine max HOM05D000966 ORTHO05D007323 5.3e-61 238.8 258 55.8
Dinv25888 Davidia involucrata HOM05D000044 ORTHO05D002853 4.5e-60 235.7 258 55.8
PSO700G0340 Papaver somniferum HOM05D000966 ORTHO05D007323 5.8e-60 235.3 273 53.1
TPR.G17050 Trifolium pratense HOM05D000966 ORTHO05D007323 1.7e-59 233.8 262 56.1
Medtr1g098000 Medicago truncatula HOM05D000966 ORTHO05D007323 4.9e-59 232.3 258 56.2
Sc20g0003630 Simmondsia chinensis HOM05D000966 ORTHO05D007323 6.4e-59 231.9 262 54.6
Eucgr.F02689 Eucalyptus grandis HOM05D000966 ORTHO05D007323 1.2e-57 227.6 242 56.2
Hma1.2p1_0081F.1_g042500 Hydrangea macrophylla HOM05D000966 ORTHO05D007323 1.6e-57 227.3 266 50.0
Medtr1g098370 Medicago truncatula HOM05D000966 ORTHO05D007323 6.0e-57 225.3 258 54.7
PGR042G2706 Punica granatum HOM05D000966 ORTHO05D007323 7.9e-57 224.9 248 53.6
Sp5g31860 Schrenkiella parvula HOM05D000966 ORTHO05D007323 1.3e-56 224.2 258 53.9
AL2G36860 Arabidopsis lyrata HOM05D000966 ORTHO05D007323 1.8e-56 223.8 259 53.7
THA.LOC104812030 Tarenaya hassleriana HOM05D000966 ORTHO05D007323 1.8e-56 223.8 243 54.7
Carub.0002s2362 Capsella rubella HOM05D000966 ORTHO05D007323 2.3e-56 223.4 263 53.6
Thhalv10018466m.g Eutrema salsugineum HOM05D000966 ORTHO05D007323 2.5e-55 219.9 259 55.2
ATR0584G286 Amborella trichopoda HOM05D000966 ORTHO05D007323 8.1e-54 214.9 262 50.0
Aa31LG4G6790 Aethionema arabicum HOM05D000966 ORTHO05D007323 1.4e-53 214.2 244 53.7
AT1G76710 Arabidopsis thaliana HOM05D000966 ORTHO05D007323 5.3e-53 212.2 262 51.9
Aqoxy4G02511 Aquilegia oxysepala HOM05D000966 ORTHO05D007323 1.2e-52 211.1 269 49.4
BcaC08g47180 Brassica carinata HOM05D001345 ORTHO05D001190 1.4e-50 204.1 249 53.0
AUR62026672 Chenopodium quinoa HOM05D000966 ORTHO05D007323 5.1e-48 195.7 258 49.2
GSVIVG01034572001 Vitis vinifera HOM05D000966 ORTHO05D007323 1.1e-47 194.5 255 47.1
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 5.6e-47 192.2 263 46.8
AUR62040579 Chenopodium quinoa HOM05D000966 ORTHO05D007323 1.3e-46 191.0 258 47.7
Hund26681 Selenicereus undatus HOM05D000966 ORTHO05D007323 3.7e-46 189.5 264 45.8
Ah.02g124940 Amaranthus hybridus HOM05D000966 ORTHO05D007323 6.2e-46 188.7 258 45.7
MD10G1033100 Malus domestica HOM05D000966 ORTHO05D007323 6.9e-45 185.3 134 73.9
CARHR070260 Cardamine hirsuta HOM05D000966 ORTHO05D007323 1.0e-43 181.4 263 46.0
SalBow6G0098 Salvia bowleyana HOM05D000966 ORTHO05D007323 1.4e-42 177.6 262 44.3
MSTRG.22010 Avicennia marina HOM05D000966 ORTHO05D007323 4.2e-42 176.0 265 45.7
CDE12G0409 Ceratophyllum demersum HOM05D000966 ORTHO05D007323 7.1e-42 175.3 267 44.9
Nitab4.5_0000949g0070 Nicotiana tabacum HOM05D000966 ORTHO05D007323 2.1e-41 173.7 233 45.1
Nitab4.5_0000617g0300 Nicotiana tabacum HOM05D000966 ORTHO05D007323 7.9e-41 171.8 233 45.1
Migut.N03097 Erythranthe guttata HOM05D000966 ORTHO05D007323 1.0e-40 171.4 278 43.2
BcaC08g47221 Brassica carinata HOM05D000966 ORTHO05D007323 3.0e-40 169.9 241 46.9
A07p42380 Brassica napus HOM05D000966 ORTHO05D007323 3.0e-40 169.9 258 45.0
Peaxi162Scf01038g00145 Petunia axillaris HOM05D000966 ORTHO05D007323 1.1e-39 167.9 237 44.3
Oeu020493.1 Olea europaea HOM05D000966 ORTHO05D007323 7.4e-39 165.2 265 41.9
BolC6t40119H Brassica oleracea HOM05D000966 ORTHO05D007323 4.8e-38 162.5 262 42.4
BraA07t31764Z Brassica rapa HOM05D000966 ORTHO05D007323 2.4e-37 160.2 275 42.5
Peaxi162Scf00088g00919 Petunia axillaris HOM05D000966 ORTHO05D007323 6.9e-37 158.7 234 41.9
C06p50930 Brassica napus HOM05D000966 ORTHO05D007323 1.3e-35 154.5 270 41.9
DCAR_001155 Daucus carota HOM05D000966 ORTHO05D007323 1.3e-35 154.5 257 39.3
Cc03_g11990 Coffea canephora HOM05D000966 ORTHO05D007323 5.0e-35 152.5 253 39.1
Os04g0429100 Oryza sativa ssp. japonica HOM05D000966 ORTHO05D007323 5.5e-34 149.1 279 35.8
COL.COLO4_13799 Corchorus olitorius HOM05D000966 ORTHO05D007323 3.6e-33 146.4 243 44.9
unitig_18.g30053 Utricularia gibba HOM05D000966 ORTHO05D007323 7.9e-33 145.2 202 45.0
unitig_8.g4809 Utricularia gibba HOM05D000966 ORTHO05D007323 7.9e-33 145.2 202 45.0
EL10Ac1g01592 Beta vulgaris HOM05D000966 ORTHO05D007323 3.0e-32 143.3 147 53.7
Lj4C702T3 Lonicera japonica HOM05D000966 ORTHO05D007323 6.7e-32 142.1 253 41.5
MD10G1033000 Malus domestica HOM05D000966 ORTHO05D007323 2.5e-31 140.2 96 80.2
Zm00001eb082920 Zea mays HOM05D000966 ORTHO05D007323 3.3e-31 139.8 283 35.0
ECA233G6088 Erigeron canadensis HOM05D000966 ORTHO05D007323 4.3e-31 139.4 234 41.9
CAN.G555.11 Capsicum annuum HOM05D000966 ORTHO05D007323 1.8e-29 134.0 231 39.0
HanXRQChr08g0226091 Helianthus annuus HOM05D000966 ORTHO05D007323 5.3e-29 132.5 236 40.3
Sopen07g004390 Solanum pennellii HOM05D000966 ORTHO05D007323 6.9e-29 132.1 261 37.2
Solyc07g008460.3 Solanum lycopersicum HOM05D000966 ORTHO05D007323 9.1e-29 131.7 261 37.5
PGSC0003DMG400010972 Solanum tuberosum HOM05D000966 ORTHO05D007323 1.5e-28 131.0 231 38.1
Oeu056130.2 Olea europaea HOM05D000966 ORTHO05D007323 3.4e-28 129.8 250 35.6
Medtr1g098030 Medicago truncatula HOM05D000966 ORTHO05D007323 5.9e-28 129.0 209 46.9
Cc00_g32880 Coffea canephora HOM05D000966 ORTHO05D007323 5.0e-27 125.9 241 35.3
A07p42370 Brassica napus HOM05D000966 ORTHO05D007323 1.9e-26 124.0 114 57.9
Actinidia17776 Actinidia chinensis HOM05D000966 ORTHO05D007323 1.6e-25 120.9 252 36.5
Lsat_1_v5_gn_8_521 Lactuca sativa HOM05D000966 ORTHO05D007323 5.1e-24 115.9 233 38.6
GSVIVG01034571001 Vitis vinifera HOM05D000966 ORTHO05D007323 2.2e-22 110.5 126 47.6
HPP92_009293 Vanilla planifolia HOM05D000966 ORTHO05D007323 1.4e-21 107.8 103 51.5
SEGI_26212 Sequoiadendron giganteum HOM05D000966 ORTHO05D007323 1.2e-20 104.8 295 30.8
CSS0040268 Camellia sinensis var. sinensis HOM05D000966 ORTHO05D007323 5.5e-18 95.9 123 51.2
Rhsim06G0128000 Rhododendron simsii HOM05D000966 ORTHO05D007323 4.7e-17 92.8 254 31.5
Cc03_g12000 Coffea canephora HOM05D000966 ORTHO05D007323 1.8e-13 80.9 191 30.9
A07p42360 Brassica napus HOM05D001345 ORTHO05D001190 8.2e-06 55.5 41 70.7
ECA234G4770 Erigeron canadensis HOM05D000966 ORTHO05D007323 8.2e-06 55.5 66 48.5


User provided reference genes

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