Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G4571 Fragaria x ananassa HOM05D007368 ORTHO05D009330 3.0e-81 305.1 148 100.0
FvH4_6g15150 Fragaria vesca HOM05D007368 ORTHO05D009330 1.2e-77 293.1 148 97.3
FAN05G3151 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.7e-76 289.3 148 96.6
FAN14G0355 Fragaria x ananassa HOM05D007368 ORTHO05D009330 6.3e-71 270.8 148 92.6
FAN09G3524 Fragaria x ananassa HOM05D007368 ORTHO05D009330 9.1e-70 266.9 145 93.1
RcHm_v2.0_Chr3g0468451 Rosa chinensis HOM05D007368 ORTHO05D009330 1.5e-64 249.6 146 86.3
MD12G1126200 Malus domestica HOM05D007368 ORTHO05D009330 2.0e-48 196.1 149 71.1
Prupe.6G242800 Prunus persica HOM05D007368 ORTHO05D009330 3.4e-48 195.3 151 69.5
Atru.chr8.2541 Acer truncatum HOM05D007368 ORTHO05D009330 2.8e-47 192.2 144 70.1
GSVIVG01025542001 Vitis vinifera HOM05D007368 ORTHO05D009330 3.5e-45 185.3 148 66.9
Ciclev10013048m.g Citrus clementina HOM05D007368 ORTHO05D009330 1.0e-44 183.7 143 67.8
Gohir.D04G116100 Gossypium hirsutum HOM05D007368 ORTHO05D009330 6.5e-44 181.0 144 65.3
Gohir.A04G077000 Gossypium hirsutum HOM05D007368 ORTHO05D009330 1.5e-43 179.9 144 65.3
QL07p045528 Quercus lobata HOM05D007368 ORTHO05D009330 2.5e-43 179.1 153 65.4
Duzib106G0389 Durio zibethinus HOM05D007368 ORTHO05D009330 3.3e-43 178.7 147 64.6
Haze_20668 Corylus avellana HOM05D007368 ORTHO05D009330 1.6e-42 176.4 144 66.0
Cfa017494 Carpinus fangiana HOM05D007368 ORTHO05D009330 8.0e-42 174.1 144 64.6
Potri.016G084000 Populus trichocarpa HOM05D007368 ORTHO05D009330 1.4e-41 173.3 126 71.4
Thecc.05G052500 Theobroma cacao HOM05D007368 ORTHO05D009330 8.9e-41 170.6 143 62.2
Eucgr.A01185 Eucalyptus grandis HOM05D007368 ORTHO05D009330 1.2e-40 170.2 144 64.6
Manes.08G002100 Manihot esculenta HOM05D007368 ORTHO05D009330 9.8e-40 167.2 140 65.0
Gorai.009G420700 Gossypium raimondii HOM05D007368 ORTHO05D009330 1.3e-39 166.8 169 55.6
CsaV3_3G035440 Cucumis sativus L. HOM05D007368 ORTHO05D009330 1.1e-38 163.7 138 64.5
Nn2g10623 Nelumbo nucifera HOM05D007368 ORTHO05D009330 5.4e-38 161.4 131 64.1
TWI18G0236 Tripterygium wilfordii HOM05D007368 ORTHO05D009330 4.5e-37 158.3 146 58.9
PGR004G1717 Punica granatum HOM05D007368 ORTHO05D009330 7.8e-37 157.5 155 57.4
Peaxi162Scf00005g05110 Petunia axillaris HOM05D007368 ORTHO05D009330 1.3e-36 156.8 112 72.3
TAR623G0445 Trochodendron aralioides HOM05D007368 ORTHO05D009330 2.9e-36 155.6 115 67.0
THA.LOC104806520 Tarenaya hassleriana HOM05D007368 ORTHO05D009330 5.0e-36 154.8 144 60.4
Nitab4.5_0000848g0200 Nicotiana tabacum HOM05D007368 ORTHO05D009330 8.6e-36 154.1 112 69.6
SalBow4G2292 Salvia bowleyana HOM05D007368 ORTHO05D009330 1.1e-35 153.7 143 60.8
Nitab4.5_0006316g0030 Nicotiana tabacum HOM05D007368 ORTHO05D009330 3.3e-35 152.1 145 57.2
RhsimUnG0119200 Rhododendron simsii HOM05D007368 ORTHO05D009330 4.3e-35 151.8 136 61.8
SGA_v2.0_scaffold35G14174 Striga asiatica HOM05D007368 ORTHO05D009330 4.3e-35 151.8 117 65.8
AL5G34390 Arabidopsis lyrata HOM05D007368 ORTHO05D009330 7.3e-35 151.0 145 59.3
CANSAT80G2753 Cannabis sativa HOM05D007368 ORTHO05D009330 9.5e-35 150.6 144 56.9
MELO3C009303.2 Cucumis melo HOM05D007368 ORTHO05D009330 2.8e-34 149.1 113 67.3
MBI05_g24570_MAGBIO Magnolia biondii HOM05D007368 ORTHO05D009330 2.8e-34 149.1 116 60.3
EL10Ac7g17332 Beta vulgaris HOM05D007368 ORTHO05D009330 4.7e-34 148.3 123 62.6
PSO384G2936 Papaver somniferum HOM05D007368 ORTHO05D009330 6.1e-34 147.9 123 60.2
C08p28830 Brassica napus HOM05D007368 ORTHO05D009330 1.4e-33 146.7 144 59.0
Migut.L01655 Erythranthe guttata HOM05D007368 ORTHO05D009330 1.4e-33 146.7 144 57.6
Cpa.g.sc114.58 Carica papaya HOM05D007368 ORTHO05D009330 1.8e-33 146.4 129 61.2
ClCG10G020660 Citrullus lanatus HOM05D007368 ORTHO05D009330 1.8e-33 146.4 88 81.8
Aa31LG10G9720 Aethionema arabicum HOM05D007368 ORTHO05D009330 3.0e-33 145.6 144 57.6
BcaC07g39711 Brassica carinata HOM05D007368 ORTHO05D009330 3.0e-33 145.6 144 58.3
CSS0023324 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 4.0e-33 145.2 90 78.9
AUR62002707 Chenopodium quinoa HOM05D007368 ORTHO05D009330 5.2e-33 144.8 89 80.9
Sp5g08870 Schrenkiella parvula HOM05D007368 ORTHO05D009330 6.8e-33 144.4 120 65.8
AT3G53470 Arabidopsis thaliana HOM05D007368 ORTHO05D009330 8.9e-33 144.1 146 58.2
CARHR163370 Cardamine hirsuta HOM05D007368 ORTHO05D009330 1.5e-32 143.3 143 58.7
PSO339G6044 Papaver somniferum HOM05D007368 ORTHO05D009330 1.5e-32 143.3 123 58.5
A09p46480 Brassica napus HOM05D007368 ORTHO05D009330 2.6e-32 142.5 144 58.3
Thhalv10010814m.g Eutrema salsugineum HOM05D007368 ORTHO05D009330 2.6e-32 142.5 143 58.7
Lalb_Chr01g0019071 Lupinus albus HOM05D007368 ORTHO05D009330 3.4e-32 142.1 118 64.4
BolC8t50485H Brassica oleracea HOM05D007368 ORTHO05D009330 4.4e-32 141.7 148 57.4
Sabra16G0091100 Salix brachista HOM05D007368 ORTHO05D009330 4.4e-32 141.7 89 77.5
vmacro20068 Vaccinium macrocarpon HOM05D007368 ORTHO05D009330 4.4e-32 141.7 87 81.6
Os03g0285100 Oryza sativa ssp. japonica HOM05D007368 ORTHO05D009330 5.8e-32 141.4 110 66.4
Glyma.03G177200 Glycine max HOM05D007368 ORTHO05D009330 9.8e-32 140.6 129 58.9
Lsat_1_v5_gn_2_109820 Lactuca sativa HOM05D007368 ORTHO05D009330 9.8e-32 140.6 147 59.2
Aqoxy4G03165 Aquilegia oxysepala HOM05D007368 ORTHO05D009330 1.7e-31 139.8 89 74.2
BcaB01g00269 Brassica carinata HOM05D007368 ORTHO05D009330 1.7e-31 139.8 143 57.3
Carub.0005s2004 Capsella rubella HOM05D007368 ORTHO05D009330 2.2e-31 139.4 113 63.7
HanXRQChr07g0195701 Helianthus annuus HOM05D007368 ORTHO05D009330 3.7e-31 138.7 137 58.4
BraA09t40112Z Brassica rapa HOM05D007368 ORTHO05D009330 6.4e-31 137.9 148 56.1
Lj1g0027781 Lotus japonicus HOM05D007368 ORTHO05D009330 6.4e-31 137.9 89 74.2
VMungo1383G1325 Vigna mungo HOM05D007368 ORTHO05D009330 6.4e-31 137.9 117 64.1
Medtr7g100570 Medicago truncatula HOM05D007368 ORTHO05D009330 8.3e-31 137.5 132 59.8
Sc20g0004140 Simmondsia chinensis HOM05D007368 ORTHO05D009330 1.4e-30 136.7 90 75.6
A07p02830 Brassica napus HOM05D007368 ORTHO05D009330 4.1e-30 135.2 120 62.5
BraA07t28082Z Brassica rapa HOM05D007368 ORTHO05D009330 4.1e-30 135.2 120 62.5
Cc06_g03400 Coffea canephora HOM05D007368 ORTHO05D009330 1.6e-29 133.3 149 51.7
Glyma.19G177900 Glycine max HOM05D007368 ORTHO05D009330 3.5e-29 132.1 119 60.5
Psat3g046880 Pisum sativum HOM05D007368 ORTHO05D009330 6.0e-29 131.3 127 59.1
CSS0022034 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 1.0e-28 130.6 87 75.9
Zm00001eb013060 Zea mays HOM05D007368 ORTHO05D009330 1.3e-28 130.2 117 61.5
Zm00001eb039440 Zea mays HOM05D007368 ORTHO05D009330 1.7e-28 129.8 99 67.7
Zm00001eb039470 Zea mays HOM05D007368 ORTHO05D009330 1.7e-28 129.8 99 67.7
Medtr7g061255 Medicago truncatula HOM05D007368 ORTHO05D009330 3.0e-28 129.0 88 71.6
BcaC03g13096 Brassica carinata HOM05D007368 ORTHO05D009330 3.9e-28 128.6 144 54.9
BolC2t05999H Brassica oleracea HOM05D007368 ORTHO05D009330 3.9e-28 128.6 142 55.6
CDE07G1273 Ceratophyllum demersum HOM05D007368 ORTHO05D009330 8.6e-28 127.5 122 53.3
HPP92_003604 Vanilla planifolia HOM05D007368 ORTHO05D009330 1.1e-27 127.1 111 56.8
Zm00001eb039540 Zea mays HOM05D007368 ORTHO05D009330 2.5e-27 125.9 99 65.7
AUR62030166 Chenopodium quinoa HOM05D007368 ORTHO05D009330 1.2e-26 123.6 68 86.8
Phvul.001G174100 Phaseolus vulgaris HOM05D007368 ORTHO05D009330 6.8e-25 117.9 89 68.5
Sopen09g002110 Solanum pennellii HOM05D007368 ORTHO05D009330 2.6e-24 115.9 112 57.1
Actinidia11231 Actinidia chinensis HOM05D007368 ORTHO05D009330 4.4e-24 115.2 111 57.7
arahy.Tifrunner.gnm1.ann1.FER711 Arachis hypogaea HOM05D007368 ORTHO05D009330 4.4e-24 115.2 76 72.4
Dinv37241 Davidia involucrata HOM05D007368 ORTHO05D009330 7.5e-24 114.4 76 69.7
Solyc09g007240.3 Solanum lycopersicum HOM05D007368 ORTHO05D009330 9.8e-24 114.0 112 56.2
SEGI_06625 Sequoiadendron giganteum HOM05D007368 ORTHO05D009330 3.7e-23 112.1 101 54.5
arahy.Tifrunner.gnm1.ann1.XWNT9U Arachis hypogaea HOM05D007368 ORTHO05D009330 8.3e-23 110.9 73 71.2
CSS0036054 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 1.5e-19 100.1 85 64.7
Sed0014476 Sechium edule HOM05D007368 ORTHO05D009330 2.3e-17 92.8 147 43.5
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 4.1e-14 82.0 84 54.8
Pp3c5_6130 Physcomitrium patens HOM05D007368 ORTHO05D009330 4.3e-11 72.0 96 44.8
Mapoly0019s0018 Marchantia polymorpha HOM05D007368 ORTHO05D009330 6.2e-10 68.2 82 45.1
SMO180G0004 Selaginella moellendorffii HOM05D007368 ORTHO05D009330 6.8e-09 64.7 82 43.9
TAR369G0858 Trochodendron aralioides HOM05D000391 ORTHO05D011523 3.8e-07 58.9 48 58.3


User provided reference genes

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