Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G4553 Fragaria x ananassa HOM05D004734 ORTHO05D006019 0.0e+00 1447.2 752 100.0
FAN14G4409 Fragaria x ananassa HOM05D004734 ORTHO05D006019 0.0e+00 1387.9 753 96.1
FAN05G4875 Fragaria x ananassa HOM05D004734 ORTHO05D006019 0.0e+00 1374.8 765 94.2
FAN09G1456 Fragaria x ananassa HOM05D004734 ORTHO05D006019 0.0e+00 1361.3 774 92.6
RcHm_v2.0_Chr2g0157781 Rosa chinensis HOM05D004734 ORTHO05D006019 0.0e+00 1286.9 754 89.4
Prupe.3G208500 Prunus persica HOM05D004734 ORTHO05D006019 0.0e+00 1166.8 757 80.1
MD09G1116200 Malus domestica HOM05D004734 ORTHO05D006019 0.0e+00 1158.7 757 79.0
MD17G1107900 Malus domestica HOM05D004734 ORTHO05D006019 0.0e+00 1150.2 757 78.7
Cfa014305 Carpinus fangiana HOM05D004734 ORTHO05D006019 3.5e-303 1044.6 766 71.4
FvH4_6g41900 Fragaria vesca HOM05D004734 ORTHO05D006019 5.1e-302 1040.8 566 95.4
Haze_12752 Corylus avellana HOM05D004734 ORTHO05D006019 3.5e-295 1018.1 742 71.4
Atru.chr6.3288 Acer truncatum HOM05D004734 ORTHO05D006019 6.0e-295 1017.3 755 70.6
Ciclev10014379m.g Citrus clementina HOM05D004734 ORTHO05D006019 1.4e-291 1006.1 757 69.2
CANSAT64G0097 Cannabis sativa HOM05D004734 ORTHO05D006019 1.0e-289 1000.0 755 69.5
CiPaw.04G108800 Carya illinoinensis HOM05D004734 ORTHO05D006019 2.5e-288 995.3 763 68.8
Gohir.D07G174400 Gossypium hirsutum HOM05D004734 ORTHO05D006019 1.0e-281 973.4 758 65.8
Duzib138G1622 Durio zibethinus HOM05D004734 ORTHO05D006019 8.5e-281 970.3 774 66.1
Potri.002G223600 Populus trichocarpa HOM05D004734 ORTHO05D006019 7.2e-280 967.2 758 66.8
TWI75G1245 Tripterygium wilfordii HOM05D004734 ORTHO05D006019 1.8e-278 962.6 756 66.4
Glyma.02G266800 Glycine max HOM05D004734 ORTHO05D006019 4.3e-277 958.0 755 65.7
Glyma.14G050700 Glycine max HOM05D004734 ORTHO05D006019 2.8e-276 955.3 755 65.4
Manes.12G058300 Manihot esculenta HOM05D004734 ORTHO05D006019 1.4e-275 953.0 757 67.1
Dinv08709 Davidia involucrata HOM05D004734 ORTHO05D006019 2.4e-275 952.2 760 66.6
ClCG02G018160 Citrullus lanatus HOM05D004734 ORTHO05D006019 2.6e-274 948.7 752 65.3
Atru.chr6.3273 Acer truncatum HOM05D004734 ORTHO05D006019 5.0e-273 944.5 703 70.3
Gorai.001G195000 Gossypium raimondii HOM05D004734 ORTHO05D006019 7.9e-271 937.2 758 64.0
QL01p037797 Quercus lobata HOM05D004734 ORTHO05D006019 3.9e-270 934.9 710 69.4
Phvul.008G215200 Phaseolus vulgaris HOM05D004734 ORTHO05D006019 2.6e-269 932.2 755 64.4
CSS0018671 Camellia sinensis var. sinensis HOM05D004734 ORTHO05D006019 5.3e-267 924.5 759 64.4
MELO3C019721.2 Cucumis melo HOM05D004734 ORTHO05D006019 6.9e-267 924.1 771 63.0
Hma1.2p1_2840F.1_g329320 Hydrangea macrophylla HOM05D004734 ORTHO05D006019 5.9e-266 921.0 764 64.8
Sed0026816 Sechium edule HOM05D004734 ORTHO05D006019 2.5e-264 915.6 756 63.4
TAR629G0221 Trochodendron aralioides HOM05D004734 ORTHO05D006019 4.2e-264 914.8 758 62.5
arahy.Tifrunner.gnm1.ann1.L0FFGY Arachis hypogaea HOM05D004734 ORTHO05D006019 5.5e-264 914.4 769 62.3
Lalb_Chr10g0105531 Lupinus albus HOM05D004734 ORTHO05D006019 7.2e-264 914.1 757 63.4
arahy.Tifrunner.gnm1.ann1.LYY30L Arachis hypogaea HOM05D004734 ORTHO05D006019 1.4e-259 899.8 787 60.7
PGR042G3679 Punica granatum HOM05D004734 ORTHO05D006019 3.1e-259 898.7 758 61.9
Nn1g07321 Nelumbo nucifera HOM05D004734 ORTHO05D006019 4.1e-259 898.3 758 61.2
GSVIVG01030526001 Vitis vinifera HOM05D004734 ORTHO05D006019 7.0e-259 897.5 761 63.9
Actinidia09755 Actinidia chinensis HOM05D004734 ORTHO05D006019 2.9e-257 892.1 736 64.4
vmacro12148 Vaccinium macrocarpon HOM05D004734 ORTHO05D006019 3.8e-257 891.7 801 60.0
Eucgr.A01088 Eucalyptus grandis HOM05D004734 ORTHO05D006019 1.9e-256 889.4 761 61.6
AL4G28410 Arabidopsis lyrata HOM05D004734 ORTHO05D006019 3.0e-254 882.1 758 60.9
THA.LOC104826129 Tarenaya hassleriana HOM05D004734 ORTHO05D006019 4.0e-254 881.7 759 60.5
Thhalv10016293m.g Eutrema salsugineum HOM05D004734 ORTHO05D006019 4.4e-253 878.2 758 60.3
AT2G32900 Arabidopsis thaliana HOM05D004734 ORTHO05D006019 3.7e-252 875.2 751 60.2
CARHR126840 Cardamine hirsuta HOM05D004734 ORTHO05D006019 3.7e-252 875.2 758 60.0
Aa31LG5G4570 Aethionema arabicum HOM05D004734 ORTHO05D006019 4.8e-252 874.8 748 60.7
VMungo0647G1710 Vigna mungo HOM05D004734 ORTHO05D006019 6.3e-252 874.4 733 62.8
BraA03t11112Z Brassica rapa HOM05D004734 ORTHO05D006019 2.0e-250 869.4 780 59.9
BcaC01g05869 Brassica carinata HOM05D004734 ORTHO05D006019 4.5e-250 868.2 758 60.9
BolC3t14542H Brassica oleracea HOM05D004734 ORTHO05D006019 6.5e-249 864.4 781 59.3
Carub.0004s1431 Capsella rubella HOM05D004734 ORTHO05D006019 8.5e-249 864.0 756 59.9
BcaB01g03944 Brassica carinata HOM05D004734 ORTHO05D006019 1.9e-248 862.8 758 59.8
Sp4g15270 Schrenkiella parvula HOM05D004734 ORTHO05D006019 2.5e-248 862.4 758 59.8
SalBow7G0507 Salvia bowleyana HOM05D004734 ORTHO05D006019 2.7e-247 859.0 756 58.9
Solyc05g043350.4 Solanum lycopersicum HOM05D004734 ORTHO05D006019 1.4e-246 856.7 761 59.1
Migut.A01159 Erythranthe guttata HOM05D004734 ORTHO05D006019 4.0e-246 855.1 761 58.2
Cc00_g21460 Coffea canephora HOM05D004734 ORTHO05D006019 9.8e-245 850.5 764 58.2
Sc21g0001080 Simmondsia chinensis HOM05D004734 ORTHO05D006019 2.8e-244 849.0 761 59.8
BcaB02g10504 Brassica carinata HOM05D004734 ORTHO05D006019 8.3e-244 847.4 755 59.3
Nitab4.5_0000006g0360 Nicotiana tabacum HOM05D004734 ORTHO05D006019 3.8e-241 838.6 767 58.7
Nitab4.5_0009060g0010 Nicotiana tabacum HOM05D004734 ORTHO05D006019 6.5e-241 837.8 759 58.8
SGA_v2.0_scaffold73G24401 Striga asiatica HOM05D004734 ORTHO05D006019 3.2e-240 835.5 783 56.2
CAN.G387.3 Capsicum annuum HOM05D004734 ORTHO05D006019 4.2e-240 835.1 757 57.3
Aqoxy2G03788 Aquilegia oxysepala HOM05D004734 ORTHO05D006019 3.6e-239 832.0 770 57.1
A05p12730 Brassica napus HOM05D004734 ORTHO05D006019 3.6e-239 832.0 764 57.5
DCAR_012916 Daucus carota HOM05D004734 ORTHO05D006019 8.0e-239 830.9 759 58.9
BolC4t23215H Brassica oleracea HOM05D004734 ORTHO05D006019 1.8e-238 829.7 773 56.8
BraA05t20212Z Brassica rapa HOM05D004734 ORTHO05D006019 5.2e-238 828.2 773 56.7
TPR.G25656 Trifolium pratense HOM05D004734 ORTHO05D006019 9.8e-237 823.9 679 63.9
Duzib211G0196 Durio zibethinus HOM05D004734 ORTHO05D006019 1.7e-236 823.2 758 59.2
HanXRQChr16g0508221 Helianthus annuus HOM05D004734 ORTHO05D006019 1.0e-233 813.9 756 58.2
Oeu054514.1 Olea europaea HOM05D004734 ORTHO05D006019 5.0e-233 811.6 762 57.0
A03p18530 Brassica napus HOM05D004734 ORTHO05D006019 2.3e-230 802.7 727 59.8
C03p21580 Brassica napus HOM05D004734 ORTHO05D006019 2.0e-229 799.7 728 59.5
EL10Ac9g22816 Beta vulgaris HOM05D004734 ORTHO05D006019 7.5e-229 797.7 797 54.3
C04p16650 Brassica napus HOM05D004734 ORTHO05D006019 9.8e-229 797.3 756 56.9
HanXRQChr14g0438421 Helianthus annuus HOM05D004734 ORTHO05D006019 1.3e-228 797.0 754 57.6
PSO017G2150 Papaver somniferum HOM05D004734 ORTHO05D006019 3.9e-225 785.4 763 55.6
Thecc.01G184100 Theobroma cacao HOM05D004734 ORTHO05D006019 1.2e-223 780.4 570 69.6
Lsat_1_v5_gn_7_94920 Lactuca sativa HOM05D004734 ORTHO05D006019 4.9e-220 768.5 744 56.5
Gohir.A07G168100 Gossypium hirsutum HOM05D004734 ORTHO05D006019 3.5e-218 762.3 572 67.8
Rhsim06G0169400 Rhododendron simsii HOM05D004734 ORTHO05D006019 3.9e-217 758.8 715 60.3
Lj8A131T30 Lonicera japonica HOM05D004734 ORTHO05D006019 1.1e-216 757.3 730 58.8
AUR62017577 Chenopodium quinoa HOM05D004734 ORTHO05D006019 9.5e-216 754.2 755 53.9
Ah.01g001840 Amaranthus hybridus HOM05D004734 ORTHO05D006019 1.8e-214 750.0 756 52.5
Cpa.g.sc132.37 Carica papaya HOM05D004734 ORTHO05D006019 7.5e-213 744.6 702 57.5
Psat2g026760 Pisum sativum HOM05D004734 ORTHO05D006019 1.0e-209 734.2 561 68.3
Medtr5g084830 Medicago truncatula HOM05D004734 ORTHO05D006019 2.3e-209 733.0 561 68.3
MBI16_g26176_MAGBIO Magnolia biondii HOM05D004734 ORTHO05D006019 1.5e-208 730.3 758 54.5
LjContig00029g0002265 Lotus japonicus HOM05D004734 ORTHO05D006019 3.6e-207 725.7 561 67.4
CsaV3_6G015550 Cucumis sativus L. HOM05D004734 ORTHO05D006019 2.3e-201 706.4 566 65.0
HPP92_000196 Vanilla planifolia HOM05D004734 ORTHO05D006019 1.8e-198 696.8 758 50.4
CDE07G0136 Ceratophyllum demersum HOM05D004734 ORTHO05D006019 3.1e-198 696.0 754 49.9
Sopen05g026560 Solanum pennellii HOM05D004734 ORTHO05D006019 5.8e-197 691.8 575 63.0
TPR.G6822 Trifolium pratense HOM05D004734 ORTHO05D006019 2.9e-196 689.5 580 61.6
Dinv39761 Davidia involucrata HOM05D004734 ORTHO05D006019 3.2e-195 686.0 512 71.1
ECA236G2537 Erigeron canadensis HOM05D004734 ORTHO05D006019 2.1e-194 683.3 631 57.8
ATR1128G058 Amborella trichopoda HOM05D004734 ORTHO05D006019 4.0e-190 669.1 741 50.2
PSO675G0915 Papaver somniferum HOM05D004734 ORTHO05D006019 3.4e-189 666.0 655 54.5
AUR62015114 Chenopodium quinoa HOM05D004734 ORTHO05D006019 7.1e-187 658.3 755 50.6
PGSC0003DMG400019206 Solanum tuberosum HOM05D004734 ORTHO05D006019 2.3e-177 626.7 531 62.3
Hma1.2p1_2840F.1_g329330 Hydrangea macrophylla HOM05D004734 ORTHO05D006019 9.6e-176 621.3 529 64.1
Hund08442 Selenicereus undatus HOM05D004734 ORTHO05D006019 1.1e-171 607.8 756 47.2
Hma1.2p1_0445F.1_g154190 Hydrangea macrophylla HOM05D004734 ORTHO05D006019 2.5e-171 606.7 458 69.7
Sabra02G0171200 Salix brachista HOM05D004734 ORTHO05D006019 5.0e-164 582.4 505 60.8
Zm00001eb114880 Zea mays HOM05D004734 ORTHO05D006019 3.7e-151 539.7 631 46.9
HPP92_000240 Vanilla planifolia HOM05D004734 ORTHO05D006019 3.1e-150 536.6 524 53.6
SEGI_13952 Sequoiadendron giganteum HOM05D004734 ORTHO05D006019 1.0e-148 531.6 775 39.4
SHI10094 Sapria himalayana HOM05D004734 ORTHO05D006019 9.7e-136 488.4 432 57.4
Psat1g135920 Pisum sativum HOM05D004734 ORTHO05D006019 2.6e-128 463.8 331 71.0
Ca_06067_v3 Cicer arietinum L. HOM05D004734 ORTHO05D006019 1.0e-124 451.8 489 51.5
COL.COLO4_07254 Corchorus olitorius HOM05D004734 ORTHO05D006019 1.0e-124 451.8 532 50.2
Psat0s1468g0040 Pisum sativum HOM05D004734 ORTHO05D006019 9.2e-118 428.7 324 69.1
Peaxi162Scf00977g00312 Petunia axillaris HOM05D004734 ORTHO05D006019 4.0e-105 386.7 285 70.9
Psat0s1468g0080 Pisum sativum HOM05D004734 ORTHO05D006019 4.0e-105 386.7 284 70.4
Mapoly0004s0108 Marchantia polymorpha HOM05D004734 ORTHO05D006019 3.5e-101 373.6 818 30.1
Peaxi162Scf00977g00315 Petunia axillaris HOM05D004734 ORTHO05D006019 1.1e-99 368.6 476 46.4
unitig_8.g4607 Utricularia gibba HOM05D004734 ORTHO05D006019 2.1e-98 364.4 380 53.7
RcHm_v2.0_Chr1g0340141 Rosa chinensis HOM05D004734 ORTHO05D006019 3.6e-98 363.6 218 84.4
Ca_06064_v3 Cicer arietinum L. HOM05D004734 ORTHO05D000733 6.2e-90 336.3 278 64.7
Os11g0545700 Oryza sativa ssp. japonica HOM05D004734 ORTHO05D006019 1.5e-88 331.6 282 61.7
SMO200G0072 Selaginella moellendorffii HOM05D004734 ORTHO05D006019 7.1e-86 322.8 735 29.3
unitig_8.g4608 Utricularia gibba HOM05D004734 ORTHO05D006019 2.7e-85 320.9 345 46.7
Psat5g176200 Pisum sativum HOM05D004734 ORTHO05D006019 3.3e-83 313.9 229 69.9
RcHm_v2.0_Chr0c20g0500271 Rosa chinensis HOM05D004734 ORTHO05D006019 4.9e-79 300.1 248 70.2
Pp3c3_5560 Physcomitrium patens HOM05D004734 ORTHO05D006019 7.1e-78 296.2 758 28.2
RcHm_v2.0_Chr1g0340131 Rosa chinensis HOM05D004734 ORTHO05D006019 2.1e-77 294.7 177 84.2
Zm00001eb113720 Zea mays HOM05D004734 ORTHO05D006019 2.0e-64 251.5 204 62.3
CBR_g30206 Chara braunii HOM05D004734 ORTHO05D006019 2.4e-57 228.0 647 26.6
Atru.chr12.2374 Acer truncatum HOM05D004734 ORTHO05D006019 1.6e-53 215.3 185 61.1
SHI10095 Sapria himalayana HOM05D004734 ORTHO05D006019 2.6e-48 198.0 251 47.0
HPP92_028626 Vanilla planifolia HOM05D004734 ORTHO05D006019 2.3e-44 184.9 426 33.6
HPP92_028624 Vanilla planifolia HOM05D004734 ORTHO05D006019 2.5e-43 181.4 417 33.8
RcHm_v2.0_Chr1g0340121 Rosa chinensis HOM05D004734 ORTHO05D006019 1.8e-41 175.3 111 85.6
TPR.G146 Trifolium pratense HOM05D004734 ORTHO05D006019 1.3e-39 169.1 139 67.6
Medtr5g084823 Medicago truncatula HOM05D004734 ORTHO05D006019 3.6e-37 161.0 186 46.8
FvH4_1g12421 Fragaria vesca HOM05D058264 ORTHO05D029456 9.7e-27 126.3 137 51.8
Psat1g136480 Pisum sativum HOM05D002598 ORTHO05D014892 9.1e-25 119.8 88 65.9
Ca_06065_v3 Cicer arietinum L. HOM05D004734 ORTHO05D001394 5.9e-24 117.1 92 64.1
Ca_31316_v3 Cicer arietinum L. HOM05D004734 ORTHO05D006019 5.9e-24 117.1 89 67.4
HPP92_000155 Vanilla planifolia HOM05D004734 ORTHO05D006019 9.8e-19 99.8 266 31.2
HPP92_028625 Vanilla planifolia HOM05D004734 ORTHO05D006019 1.7e-18 99.0 76 63.2
SMO278G0012 Selaginella moellendorffii HOM05D004734 ORTHO05D006019 3.7e-18 97.8 290 28.6
FvH4_3g20454 Fragaria vesca HOM05D004734 ORTHO05D196162 3.1e-17 94.7 103 53.4
HPP92_028623 Vanilla planifolia HOM05D004734 ORTHO05D006019 5.5e-14 84.0 68 58.8
CBR_g3444 Chara braunii HOM05D000019 ORTHO05D000353 1.2e-11 76.3 113 34.5
arahy.Tifrunner.gnm1.ann1.RUY2TK Arachis hypogaea HOM05D005906 ORTHO05D007359 1.5e-06 59.3 38 73.7
Nitab4.5_0001356g0190 Nicotiana tabacum HOM05D000224 ORTHO05D001489 1.5e-06 59.3 124 29.8
Glyma.20G074700 Glycine max HOM05D004734 ORTHO05D213795 4.2e-06 57.8 45 68.9


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