Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G4453 Fragaria x ananassa HOM05D003613 ORTHO05D004055 1.0e-54 216.5 109 100.0
RcHm_v2.0_Chr2g0131951 Rosa chinensis HOM05D003613 ORTHO05D004055 2.6e-42 175.3 91 97.8
Prupe.3G105500 Prunus persica HOM05D003613 ORTHO05D004055 1.3e-36 156.4 91 85.7
MD09G1229400 Malus domestica HOM05D003613 ORTHO05D004055 6.3e-36 154.1 91 83.5
MD17G1228300 Malus domestica HOM05D003613 ORTHO05D004055 7.0e-35 150.6 91 81.3
Potri.003G186400 Populus trichocarpa HOM05D003613 ORTHO05D004055 7.2e-32 140.6 91 76.9
FAN14G0884 Fragaria x ananassa HOM05D008004 ORTHO05D004055 9.4e-32 140.2 88 84.1
FvH4_6g28090 Fragaria vesca HOM05D008004 ORTHO05D011218 1.6e-31 139.4 91 80.2
COL.COLO4_30901 Corchorus olitorius HOM05D003613 ORTHO05D004055 1.4e-30 136.3 92 71.7
Potri.001G038750 Populus trichocarpa HOM05D003613 ORTHO05D004055 5.2e-30 134.4 91 73.6
Ciclev10026842m.g Citrus clementina HOM05D003613 ORTHO05D004055 6.8e-30 134.0 91 72.5
MELO3C024884.2 Cucumis melo HOM05D003613 ORTHO05D004055 6.8e-30 134.0 92 72.8
CsaV3_3G032670 Cucumis sativus L. HOM05D003613 ORTHO05D004055 1.2e-29 133.3 92 72.8
Gohir.D06G146000 Gossypium hirsutum HOM05D003613 ORTHO05D004055 1.2e-29 133.3 90 70.0
Gorai.010G170200 Gossypium raimondii HOM05D003613 ORTHO05D004055 1.2e-29 133.3 90 70.0
Potri.001G038200 Populus trichocarpa HOM05D003613 ORTHO05D004055 1.5e-29 132.9 91 72.5
Potri.001G040300 Populus trichocarpa HOM05D003613 ORTHO05D004055 1.5e-29 132.9 91 73.6
CsaV3_7G031790 Cucumis sativus L. HOM05D003613 ORTHO05D004055 2.0e-29 132.5 91 74.7
Duzib235G1294 Durio zibethinus HOM05D003613 ORTHO05D004055 2.0e-29 132.5 91 68.1
Gohir.A06G141700 Gossypium hirsutum HOM05D003613 ORTHO05D004055 2.0e-29 132.5 91 68.1
ClCG10G012830 Citrullus lanatus HOM05D003613 ORTHO05D004055 4.4e-29 131.3 92 71.7
Gohir.A10G049000 Gossypium hirsutum HOM05D003613 ORTHO05D004055 4.4e-29 131.3 90 68.9
Haze_15237 Corylus avellana HOM05D003613 ORTHO05D004055 7.5e-29 130.6 91 74.7
MELO3C029246.2 Cucumis melo HOM05D003613 ORTHO05D004055 7.5e-29 130.6 91 73.6
Sed0012530 Sechium edule HOM05D003613 ORTHO05D004055 7.5e-29 130.6 110 63.6
Gohir.D10G049600 Gossypium hirsutum HOM05D003613 ORTHO05D004055 9.8e-29 130.2 90 67.8
Gorai.011G053100 Gossypium raimondii HOM05D003613 ORTHO05D004055 9.8e-29 130.2 90 67.8
TWI75G1756 Tripterygium wilfordii HOM05D003613 ORTHO05D004055 9.8e-29 130.2 90 71.1
CiPaw.01G052100 Carya illinoinensis HOM05D003613 ORTHO05D004055 1.3e-28 129.8 91 72.5
Cfa004173 Carpinus fangiana HOM05D003613 ORTHO05D004055 1.7e-28 129.4 91 74.7
Haze_16413 Corylus avellana HOM05D003613 ORTHO05D004055 1.7e-28 129.4 91 73.6
Haze_16416 Corylus avellana HOM05D003613 ORTHO05D004055 1.7e-28 129.4 91 73.6
Atru.chr1.2819 Acer truncatum HOM05D003613 ORTHO05D004055 4.8e-28 127.9 92 68.5
Manes.11G070600 Manihot esculenta HOM05D003613 ORTHO05D004055 6.3e-28 127.5 91 72.5
Thecc.06G133700 Theobroma cacao HOM05D003613 ORTHO05D004055 6.3e-28 127.5 91 68.1
Duzib160G0323 Durio zibethinus HOM05D003613 ORTHO05D004055 8.3e-28 127.1 91 67.0
TAR383G0763 Trochodendron aralioides HOM05D003613 ORTHO05D004055 1.1e-27 126.7 104 66.3
Sed0006875 Sechium edule HOM05D003613 ORTHO05D004055 1.8e-27 125.9 92 68.5
ClCG09G003430 Citrullus lanatus HOM05D003613 ORTHO05D004055 2.4e-27 125.6 91 71.4
Duzib192G0866 Durio zibethinus HOM05D003613 ORTHO05D004055 3.1e-27 125.2 91 65.9
VMungo0540G1949 Vigna mungo HOM05D003613 ORTHO05D004055 3.1e-27 125.2 91 68.1
Glyma.15G063700 Glycine max HOM05D003613 ORTHO05D004055 4.1e-27 124.8 91 68.1
Phvul.006G195900 Phaseolus vulgaris HOM05D003613 ORTHO05D004055 4.1e-27 124.8 91 68.1
TWI31G1088 Tripterygium wilfordii HOM05D003613 ORTHO05D004055 4.1e-27 124.8 87 70.1
Glyma.13G250700 Glycine max HOM05D003613 ORTHO05D004055 5.4e-27 124.4 91 68.1
Sabra03G0136400 Salix brachista HOM05D003613 ORTHO05D004055 5.4e-27 124.4 82 73.2
Manes.04G099000 Manihot esculenta HOM05D003613 ORTHO05D004055 9.1e-27 123.6 93 68.8
Sed0021976 Sechium edule HOM05D003613 ORTHO05D004055 1.6e-26 122.9 91 67.0
Cpa.g.sc68.45 Carica papaya HOM05D003613 ORTHO05D004055 2.0e-26 122.5 89 69.7
THA.LOC104813597 Tarenaya hassleriana HOM05D003613 ORTHO05D004055 2.7e-26 122.1 89 67.4
Sabra03G0136500 Salix brachista HOM05D003613 ORTHO05D004055 3.5e-26 121.7 84 69.0
Dinv21437 Davidia involucrata HOM05D003613 ORTHO05D004055 7.7e-26 120.6 98 66.3
Eucgr.F03989 Eucalyptus grandis HOM05D003613 ORTHO05D004055 1.7e-25 119.4 93 69.9
Glyma.01G154800 Glycine max HOM05D003613 ORTHO05D004055 1.7e-25 119.4 91 63.7
arahy.Tifrunner.gnm1.ann1.T22GZM Arachis hypogaea HOM05D003613 ORTHO05D004055 2.3e-25 119.0 80 70.0
DCAR_025611 Daucus carota HOM05D003613 ORTHO05D004055 2.3e-25 119.0 97 63.9
Lalb_Chr19g0125611 Lupinus albus HOM05D003613 ORTHO05D004055 3.8e-25 118.2 91 67.0
Lj6g0025627 Lotus japonicus HOM05D003613 ORTHO05D004055 5.0e-25 117.9 91 62.6
Nn8g40130 Nelumbo nucifera HOM05D003613 ORTHO05D004055 5.0e-25 117.9 96 69.8
Glyma.15G176700 Glycine max HOM05D003613 ORTHO05D004055 6.5e-25 117.5 91 64.8
Rhsim12G0183300 Rhododendron simsii HOM05D003613 ORTHO05D004055 8.6e-25 117.1 100 63.0
GSVIVG01016088001 Vitis vinifera HOM05D003613 ORTHO05D004055 1.1e-24 116.7 94 66.0
Ca_00210_v3 Cicer arietinum L. HOM05D003613 ORTHO05D004055 1.9e-24 115.9 95 62.1
Oeu051549.1 Olea europaea HOM05D003613 ORTHO05D004055 1.9e-24 115.9 100 64.0
QL12p003368 Quercus lobata HOM05D003613 ORTHO05D004055 4.2e-24 114.8 89 70.8
Glyma.07G187000 Glycine max HOM05D003613 ORTHO05D004055 7.2e-24 114.0 88 65.9
Potri.001G039700 Populus trichocarpa HOM05D003613 ORTHO05D004055 9.5e-24 113.6 74 75.7
Nitab4.5_0005437g0020 Nicotiana tabacum HOM05D003613 ORTHO05D004055 2.1e-23 112.5 119 55.5
Phvul.002G218400 Phaseolus vulgaris HOM05D003613 ORTHO05D004055 2.1e-23 112.5 88 60.2
PGSC0003DMG400014438 Solanum tuberosum HOM05D003613 ORTHO05D004055 2.1e-23 112.5 99 62.6
Carub.0002s2654 Capsella rubella HOM05D003613 ORTHO05D004055 2.8e-23 112.1 91 63.7
HanXRQChr05g0157501 Helianthus annuus HOM05D003613 ORTHO05D004055 2.8e-23 112.1 98 61.2
Medtr2g010880 Medicago truncatula HOM05D003613 ORTHO05D004055 2.8e-23 112.1 95 62.1
ATR0580G444 Amborella trichopoda HOM05D003613 ORTHO05D004055 3.6e-23 111.7 97 60.8
ECA247G1662 Erigeron canadensis HOM05D003613 ORTHO05D004055 3.6e-23 111.7 96 58.3
Lalb_Chr20g0122601 Lupinus albus HOM05D003613 ORTHO05D004055 4.7e-23 111.3 90 60.0
Sp5g34740 Schrenkiella parvula HOM05D003613 ORTHO05D004055 4.7e-23 111.3 91 62.6
CAN.G1008.14 Capsicum annuum HOM05D003613 ORTHO05D004055 8.0e-23 110.5 101 57.4
HanXRQChr04g0100011 Helianthus annuus HOM05D003613 ORTHO05D004055 8.0e-23 110.5 97 58.8
TPR.G32634 Trifolium pratense HOM05D003613 ORTHO05D004055 8.0e-23 110.5 94 60.6
arahy.Tifrunner.gnm1.ann1.XPM13Z Arachis hypogaea HOM05D003613 ORTHO05D004055 1.0e-22 110.2 87 62.1
Thhalv10019378m.g Eutrema salsugineum HOM05D003613 ORTHO05D004055 1.0e-22 110.2 91 61.5
Aqoxy5G00706 Aquilegia oxysepala HOM05D003613 ORTHO05D004055 2.3e-22 109.0 94 63.8
Cc04_g05380 Coffea canephora HOM05D003613 ORTHO05D004055 2.3e-22 109.0 100 60.0
Lalb_Chr16g0383261 Lupinus albus HOM05D003613 ORTHO05D004055 2.3e-22 109.0 90 64.4
QL10p043081 Quercus lobata HOM05D003613 ORTHO05D004055 2.3e-22 109.0 89 68.5
Sopen12g021630 Solanum pennellii HOM05D003613 ORTHO05D004055 2.3e-22 109.0 99 60.6
vmacro19080 Vaccinium macrocarpon HOM05D003613 ORTHO05D004055 2.3e-22 109.0 98 60.2
AT1G79660 Arabidopsis thaliana HOM05D003613 ORTHO05D004055 3.0e-22 108.6 91 60.4
AL1G28300 Arabidopsis lyrata HOM05D003613 ORTHO05D004055 4.0e-22 108.2 91 61.5
MSTRG.9389 Avicennia marina HOM05D003613 ORTHO05D004055 5.2e-22 107.8 100 59.0
Thhalv10009201m.g Eutrema salsugineum HOM05D003613 ORTHO05D004055 6.8e-22 107.5 91 63.7
MBI14_g16433_MAGBIO Magnolia biondii HOM05D003613 ORTHO05D004055 6.8e-22 107.5 105 58.1
SEGI_37804 Sequoiadendron giganteum HOM05D003613 ORTHO05D004055 6.8e-22 107.5 98 60.2
SGA_v2.0_scaffold515G52657 Striga asiatica HOM05D003613 ORTHO05D004055 6.8e-22 107.5 101 61.4
Actinidia36859 Actinidia chinensis HOM05D000338 ORTHO05D003721 8.9e-22 107.1 102 56.9
Glyma.08G062200 Glycine max HOM05D003613 ORTHO05D004055 8.9e-22 107.1 92 57.6
Peaxi162Scf00195g00118 Petunia axillaris HOM05D003613 ORTHO05D004055 8.9e-22 107.1 80 67.5
Sopen03g036670 Solanum pennellii HOM05D003613 ORTHO05D004055 8.9e-22 107.1 101 59.4
CSS0042010 Camellia sinensis var. sinensis HOM05D003613 ORTHO05D004055 1.2e-21 106.7 102 57.8
CARHR073400 Cardamine hirsuta HOM05D003613 ORTHO05D004055 1.2e-21 106.7 91 63.7
ECA246G2284 Erigeron canadensis HOM05D003613 ORTHO05D004055 1.2e-21 106.7 97 60.8
Os08g0266200 Oryza sativa ssp. japonica HOM05D003613 ORTHO05D004055 1.2e-21 106.7 96 58.3
PGSC0003DMG400014217 Solanum tuberosum HOM05D003613 ORTHO05D004055 1.2e-21 106.7 101 58.4
Psat1g210880 Pisum sativum HOM05D003613 ORTHO05D004055 1.5e-21 106.3 88 62.5
BcaB02g06598 Brassica carinata HOM05D003613 ORTHO05D004055 2.0e-21 105.9 92 62.0
Lsat_1_v5_gn_5_9061 Lactuca sativa HOM05D003613 ORTHO05D004055 2.0e-21 105.9 97 57.7
Sp1g14410 Schrenkiella parvula HOM05D003613 ORTHO05D004055 2.0e-21 105.9 91 62.6
SGA_v2.0_scaffold74G24606 Striga asiatica HOM05D003613 ORTHO05D004055 2.0e-21 105.9 101 59.4
CARHR016650 Cardamine hirsuta HOM05D003613 ORTHO05D004055 2.6e-21 105.5 91 62.6
Aa31LG7G710 Aethionema arabicum HOM05D003613 ORTHO05D004055 3.4e-21 105.1 92 62.0
ATR0068G040 Amborella trichopoda HOM05D003613 ORTHO05D004055 3.4e-21 105.1 97 57.7
AL2G40350 Arabidopsis lyrata HOM05D003613 ORTHO05D004055 3.4e-21 105.1 91 59.3
Oeu033454.1 Olea europaea HOM05D003613 ORTHO05D004055 3.4e-21 105.1 101 58.4
ECA232G3259 Erigeron canadensis HOM05D003613 ORTHO05D004055 4.4e-21 104.8 94 58.5
A09p61000 Brassica napus HOM05D003613 ORTHO05D004055 5.7e-21 104.4 91 61.5
BraA09t41473Z Brassica rapa HOM05D003613 ORTHO05D004055 5.7e-21 104.4 91 61.5
MSTRG.11218 Avicennia marina HOM05D003613 ORTHO05D004055 7.5e-21 104.0 100 55.0
BcaB03g14503 Brassica carinata HOM05D003613 ORTHO05D004055 7.5e-21 104.0 91 61.5
C08p44600 Brassica napus HOM05D003613 ORTHO05D004055 7.5e-21 104.0 91 61.5
BolC8t52006H Brassica oleracea HOM05D003613 ORTHO05D004055 7.5e-21 104.0 91 61.5
Solyc12g042540.1 Solanum lycopersicum HOM05D003613 ORTHO05D004055 7.5e-21 104.0 99 58.6
Aa31LG4G1310 Aethionema arabicum HOM05D003613 ORTHO05D004055 9.8e-21 103.6 79 68.4
MSTRG.22838 Avicennia marina HOM05D003613 ORTHO05D004055 1.3e-20 103.2 100 56.0
Ca_18450_v3 Cicer arietinum L. HOM05D003613 ORTHO05D004055 2.2e-20 102.4 82 58.5
AT1G16170 Arabidopsis thaliana HOM05D003613 ORTHO05D004055 2.8e-20 102.1 91 60.4
Rhsim08G0202400 Rhododendron simsii HOM05D003613 ORTHO05D004055 2.8e-20 102.1 98 54.1
arahy.Tifrunner.gnm1.ann1.M9YY7V Arachis hypogaea HOM05D003613 ORTHO05D004055 3.7e-20 101.7 94 58.5
Carub.0001s1593 Capsella rubella HOM05D003613 ORTHO05D004055 3.7e-20 101.7 90 60.0
BcaC08g47524 Brassica carinata HOM05D003613 ORTHO05D004055 4.9e-20 101.3 92 57.6
Lalb_Chr09g0327111 Lupinus albus HOM05D003613 ORTHO05D004055 6.3e-20 100.9 82 64.6
unitig_22.g6276 Utricularia gibba HOM05D003613 ORTHO05D004055 6.3e-20 100.9 100 54.0
EL10Ac5g12047 Beta vulgaris HOM05D003613 ORTHO05D004055 8.3e-20 100.5 95 60.0
A06p12110 Brassica napus HOM05D003613 ORTHO05D004055 8.3e-20 100.5 92 59.8
BraA06t24380Z Brassica rapa HOM05D003613 ORTHO05D004055 8.3e-20 100.5 92 59.8
arahy.Tifrunner.gnm1.ann1.DB50AT Arachis hypogaea HOM05D003613 ORTHO05D004055 1.4e-19 99.8 94 56.4
BcaC08g47525 Brassica carinata HOM05D003613 ORTHO05D004055 1.4e-19 99.8 92 58.7
BolC5t30160H Brassica oleracea HOM05D003613 ORTHO05D004055 1.4e-19 99.8 91 58.2
BolC6t40365H Brassica oleracea HOM05D003613 ORTHO05D004055 1.4e-19 99.8 92 58.7
Gohir.D09G076100 Gossypium hirsutum HOM05D003613 ORTHO05D004055 1.4e-19 99.8 91 54.9
A07p44660 Brassica napus HOM05D003613 ORTHO05D004055 1.8e-19 99.4 92 58.7
BraA07t31975Z Brassica rapa HOM05D003613 ORTHO05D004055 1.8e-19 99.4 92 58.7
Nn2g12477 Nelumbo nucifera HOM05D003613 ORTHO05D004055 1.8e-19 99.4 99 61.6
Gorai.006G091300 Gossypium raimondii HOM05D003613 ORTHO05D004055 3.1e-19 98.6 91 54.9
Migut.D01149 Erythranthe guttata HOM05D003613 ORTHO05D004055 4.1e-19 98.2 103 55.3
Migut.I00632 Erythranthe guttata HOM05D003613 ORTHO05D004055 4.1e-19 98.2 102 52.0
unitig_8.g3041 Utricularia gibba HOM05D003613 ORTHO05D004055 4.1e-19 98.2 100 53.0
Gohir.A09G076160 Gossypium hirsutum HOM05D003613 ORTHO05D004055 7.0e-19 97.4 91 54.9
BcaC05g25604 Brassica carinata HOM05D003613 ORTHO05D004055 9.2e-19 97.1 91 57.1
AUR62018676 Chenopodium quinoa HOM05D003613 ORTHO05D004055 9.2e-19 97.1 97 56.7
Nitab4.5_0002700g0020 Nicotiana tabacum HOM05D003613 ORTHO05D004055 9.2e-19 97.1 81 63.0
C05p14290 Brassica napus HOM05D003613 ORTHO05D004055 1.2e-18 96.7 91 57.1
DCAR_021377 Daucus carota HOM05D003613 ORTHO05D004055 3.5e-18 95.1 79 59.5
BcaC07g38803 Brassica carinata HOM05D003613 ORTHO05D004055 4.5e-18 94.7 92 58.7
C08p17390 Brassica napus HOM05D003613 ORTHO05D004055 4.5e-18 94.7 92 58.7
BolC8t49365H Brassica oleracea HOM05D003613 ORTHO05D004055 4.5e-18 94.7 92 58.7
Lsat_1_v5_gn_4_84900 Lactuca sativa HOM05D003613 ORTHO05D004055 4.5e-18 94.7 94 54.3
MBI15_g26076_MAGBIO Magnolia biondii HOM05D003613 ORTHO05D004055 7.8e-18 94.0 84 61.9
SHI11349 Sapria himalayana HOM05D003613 ORTHO05D004055 1.0e-17 93.6 86 59.3
arahy.Tifrunner.gnm1.ann1.LI0G0T Arachis hypogaea HOM05D003613 ORTHO05D004055 1.7e-17 92.8 94 53.2
SalBow1G4637 Salvia bowleyana HOM05D003613 ORTHO05D004055 1.7e-17 92.8 101 54.5
TPR.G13916 Trifolium pratense HOM05D003613 ORTHO05D004055 2.3e-17 92.4 74 51.4
Ah.12g055300 Amaranthus hybridus HOM05D003613 ORTHO05D004055 3.8e-17 91.7 97 57.7
A08p31400 Brassica napus HOM05D003613 ORTHO05D004055 5.0e-17 91.3 99 54.5
BraA08t35063Z Brassica rapa HOM05D003613 ORTHO05D004055 5.0e-17 91.3 99 54.5
BcaB03g13047 Brassica carinata HOM05D003613 ORTHO05D004055 6.6e-17 90.9 92 56.5
Lj4g0025384 Lotus japonicus HOM05D003613 ORTHO05D004055 1.1e-16 90.1 84 54.8
Zm00001eb177920 Zea mays HOM05D003613 ORTHO05D004055 2.5e-16 89.0 92 52.2
BcaC03g14996 Brassica carinata HOM05D003613 ORTHO05D004055 1.6e-15 86.3 73 63.0
BolC2t08604H Brassica oleracea HOM05D003613 ORTHO05D004055 1.6e-15 86.3 73 63.0
C02p25300 Brassica napus HOM05D003613 ORTHO05D004055 2.1e-15 85.9 73 63.0
Zm00001eb412000 Zea mays HOM05D003613 ORTHO05D004055 1.0e-14 83.6 93 50.5
BcaC03g17203 Brassica carinata HOM05D003613 ORTHO05D004055 1.4e-14 83.2 79 58.2
BolC2t11219H Brassica oleracea HOM05D003613 ORTHO05D004055 1.4e-14 83.2 79 58.2
TAR626G0045 Trochodendron aralioides HOM05D003147 ORTHO05D004055 1.4e-14 83.2 66 68.2
BolC8t51544H Brassica oleracea HOM05D003613 ORTHO05D004055 3.0e-14 82.0 77 59.7
C08p39730 Brassica napus HOM05D003613 ORTHO05D004055 4.0e-14 81.6 79 57.0
CSS0016880 Camellia sinensis var. sinensis HOM05D003613 ORTHO05D004055 2.2e-12 75.9 64 65.6
Pp3c10_10840 Physcomitrium patens HOM05D003613 ORTHO05D004055 2.7e-10 68.9 76 47.4
AagrBONN_evm.TU.Sc2ySwM_368.2820 Anthoceros agrestis HOM05D003613 ORTHO05D004055 3.5e-10 68.6 58 53.4
SMO307G0037 Selaginella moellendorffii HOM05D000818 ORTHO05D004055 7.8e-10 67.4 75 48.0
DCAR_021376 Daucus carota HOM05D003613 ORTHO05D004055 1.3e-09 66.6 53 62.3
Pp3c14_25540 Physcomitrium patens HOM05D003613 ORTHO05D004055 1.7e-09 66.2 61 50.8
SMO001G0027 Selaginella moellendorffii HOM05D003613 ORTHO05D004055 1.7e-09 66.2 52 57.7
Mapoly0033s0168 Marchantia polymorpha HOM05D000087 ORTHO05D255883 8.6e-09 63.9 70 44.3
Nitab4.5_0004781g0020 Nicotiana tabacum HOM05D003613 ORTHO05D004055 1.4e-06 56.6 38 63.2
Aqoxy1G01707 Aquilegia oxysepala HOM05D003613 ORTHO05D004055 4.0e-06 55.1 45 60.0


User provided reference genes

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