Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G4384 Fragaria x ananassa HOM05D006426 ORTHO05D007737 3.6e-236 821.2 431 100.0
FAN09G0359 Fragaria x ananassa HOM05D006426 ORTHO05D007737 4.8e-228 794.3 435 96.6
FAN14G1414 Fragaria x ananassa HOM05D006426 ORTHO05D007737 3.4e-218 761.5 436 93.3
FvH4_6g44570 Fragaria vesca HOM05D006426 ORTHO05D007737 4.9e-217 757.7 436 92.9
RcHm_v2.0_Chr2g0161781 Rosa chinensis HOM05D006426 ORTHO05D007737 1.8e-214 749.2 441 91.6
Prupe.3G231100 Prunus persica HOM05D006426 ORTHO05D007737 2.6e-157 559.3 464 71.1
MD09G1096400 Malus domestica HOM05D006426 ORTHO05D007737 6.6e-153 544.7 467 70.7
MD17G1084500 Malus domestica HOM05D006426 ORTHO05D007737 6.8e-142 508.1 464 67.9
Haze_13087 Corylus avellana HOM05D006426 ORTHO05D007737 1.1e-131 474.2 473 61.7
Cfa014544 Carpinus fangiana HOM05D006426 ORTHO05D007737 5.4e-131 471.9 468 61.3
QL08p037311 Quercus lobata HOM05D006426 ORTHO05D007737 2.6e-125 453.0 481 60.3
CiPaw.04G122700 Carya illinoinensis HOM05D006426 ORTHO05D007737 3.6e-119 432.6 468 57.9
Dinv15495 Davidia involucrata HOM05D006426 ORTHO05D007737 9.3e-107 391.3 478 54.6
Potri.013G147500 Populus trichocarpa HOM05D006426 ORTHO05D007737 3.5e-106 389.4 467 54.2
TWI36G1326 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 1.6e-103 380.6 479 52.0
Rhsim06G0152100 Rhododendron simsii HOM05D006426 ORTHO05D007737 2.1e-103 380.2 495 52.1
TWI75G1119 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 3.7e-103 379.4 477 52.6
Gorai.005G205500 Gossypium raimondii HOM05D006426 ORTHO05D007737 5.3e-102 375.6 469 52.9
Gohir.A03G160000 Gossypium hirsutum HOM05D006426 ORTHO05D007737 2.0e-101 373.6 469 52.7
Gohir.D02G183100 Gossypium hirsutum HOM05D006426 ORTHO05D007737 2.0e-101 373.6 469 52.5
Potri.019G116200 Populus trichocarpa HOM05D006426 ORTHO05D007737 1.7e-100 370.5 464 53.2
Sabra13G0119100 Salix brachista HOM05D006426 ORTHO05D007737 8.4e-100 368.2 465 53.8
Ciclev10015289m.g Citrus clementina HOM05D006426 ORTHO05D007737 1.1e-99 367.9 428 55.4
COL.COLO4_13683 Corchorus olitorius HOM05D006426 ORTHO05D007737 3.2e-99 366.3 483 52.4
Manes.13G151600 Manihot esculenta HOM05D006426 ORTHO05D007737 1.2e-98 364.4 467 53.7
Thecc.02G171600 Theobroma cacao HOM05D006426 ORTHO05D007737 1.2e-98 364.4 479 52.8
Manes.12G083000 Manihot esculenta HOM05D006426 ORTHO05D007737 7.9e-98 361.7 465 52.0
Sabra19G0136500 Salix brachista HOM05D006426 ORTHO05D007737 7.9e-98 361.7 466 52.8
Sabra19G0117200 Salix brachista HOM05D006426 ORTHO05D007737 3.9e-97 359.4 466 51.7
Duzib248G1395 Durio zibethinus HOM05D006426 ORTHO05D007737 5.7e-96 355.5 476 51.3
TWI18G0136 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 9.6e-96 354.8 469 48.4
Sopen07g028590 Solanum pennellii HOM05D006426 ORTHO05D007737 6.2e-95 352.1 492 49.6
Actinidia12458 Actinidia chinensis HOM05D006426 ORTHO05D007737 8.2e-95 351.7 477 52.4
Solyc07g054690.1 Solanum lycopersicum HOM05D006426 ORTHO05D007737 3.1e-94 349.7 493 49.5
PGSC0003DMG400018371 Solanum tuberosum HOM05D006426 ORTHO05D007737 5.3e-94 349.0 492 49.2
Duzib132G0414 Durio zibethinus HOM05D006426 ORTHO05D007737 1.0e-92 344.7 471 51.6
CAN.G508.22 Capsicum annuum HOM05D006426 ORTHO05D007737 5.0e-92 342.4 475 49.7
TAR627G1051 Trochodendron aralioides HOM05D006426 ORTHO05D007737 8.4e-92 341.7 465 48.8
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 7.9e-90 335.1 482 47.1
Peaxi162Scf00007g00272 Petunia axillaris HOM05D006426 ORTHO05D007737 7.9e-90 335.1 484 49.0
Nitab4.5_0001871g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 1.0e-89 334.7 497 48.3
Nn1g03877 Nelumbo nucifera HOM05D006426 ORTHO05D007737 3.9e-89 332.8 469 48.2
Actinidia09902 Actinidia chinensis HOM05D006426 ORTHO05D007737 1.1e-88 331.3 458 50.0
Cpa.g.sc34.90 Carica papaya HOM05D006426 ORTHO05D007737 3.3e-88 329.7 477 49.3
Hma1.2p1_0565F.1_g179550 Hydrangea macrophylla HOM05D006426 ORTHO05D007737 3.3e-88 329.7 460 50.7
Cc05_g06260 Coffea canephora HOM05D006426 ORTHO05D007737 4.8e-87 325.9 497 47.1
Oeu025481.1 Olea europaea HOM05D006426 ORTHO05D007737 4.1e-86 322.8 517 44.5
MSTRG.14180 Avicennia marina HOM05D006426 ORTHO05D007737 4.5e-85 319.3 494 47.0
Ah.01g003530 Amaranthus hybridus HOM05D006426 ORTHO05D007737 1.0e-84 318.2 479 46.6
DCAR_009725 Daucus carota HOM05D006426 ORTHO05D007737 2.2e-84 317.0 455 49.0
Nitab4.5_0002370g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 1.4e-83 314.3 494 46.0
PGR042G3565 Punica granatum HOM05D006426 ORTHO05D007737 1.4e-83 314.3 478 47.9
EL10Ac9g20938 Beta vulgaris HOM05D006426 ORTHO05D007737 4.2e-83 312.8 491 46.8
THA.LOC104804065 Tarenaya hassleriana HOM05D006426 ORTHO05D007737 6.7e-81 305.4 461 46.6
MELO3C013535.2 Cucumis melo HOM05D006426 ORTHO05D007737 2.0e-80 303.9 471 45.6
ClCG02G017320 Citrullus lanatus HOM05D006426 ORTHO05D007737 1.8e-78 297.4 476 46.0
Sed0007067 Sechium edule HOM05D006426 ORTHO05D007737 1.5e-77 294.3 464 47.0
CsaV3_6G012420 Cucumis sativus L. HOM05D006426 ORTHO05D007737 7.7e-77 292.0 472 46.0
Oeu018075.1 Olea europaea HOM05D006426 ORTHO05D007737 2.2e-76 290.4 482 44.4
TAR629G2656 Trochodendron aralioides HOM05D006426 ORTHO05D007737 2.9e-76 290.0 424 46.5
Thhalv10025277m.g Eutrema salsugineum HOM05D006426 ORTHO05D007737 1.9e-75 287.3 456 44.5
Lj8P117T60 Lonicera japonica HOM05D006426 ORTHO05D007737 3.6e-74 283.1 352 54.0
AL7G24370 Arabidopsis lyrata HOM05D006426 ORTHO05D007737 4.7e-74 282.7 442 46.2
Eucgr.A01776 Eucalyptus grandis HOM05D006426 ORTHO05D007737 6.1e-74 282.3 418 47.8
AT4G28230 Arabidopsis thaliana HOM05D006426 ORTHO05D007737 3.3e-72 276.6 445 45.6
SalBow1G4632 Salvia bowleyana HOM05D006426 ORTHO05D007737 5.7e-72 275.8 466 45.7
Sc06g0009150 Simmondsia chinensis HOM05D006426 ORTHO05D007737 5.7e-72 275.8 474 44.3
arahy.Tifrunner.gnm1.ann1.2866YZ Arachis hypogaea HOM05D006426 ORTHO05D007737 9.7e-72 275.0 488 43.0
arahy.Tifrunner.gnm1.ann1.512YGT Arachis hypogaea HOM05D006426 ORTHO05D007737 2.8e-71 273.5 489 42.7
A01p19640 Brassica napus HOM05D006426 ORTHO05D007737 6.3e-71 272.3 441 46.3
Migut.H01020 Erythranthe guttata HOM05D006426 ORTHO05D007737 8.2e-71 271.9 502 44.2
CARHR235940 Cardamine hirsuta HOM05D006426 ORTHO05D007737 1.1e-70 271.6 449 44.1
Carub.0007s1253 Capsella rubella HOM05D006426 ORTHO05D007737 7.0e-70 268.9 441 45.8
BcaNung01587 Brassica carinata HOM05D006426 ORTHO05D007737 2.6e-69 266.9 435 46.0
TAR626G1919 Trochodendron aralioides HOM05D006426 ORTHO05D007737 2.6e-69 266.9 466 41.2
Sp7g26190 Schrenkiella parvula HOM05D006426 ORTHO05D007737 5.0e-68 262.7 451 42.4
Atru.chr6.3076 Acer truncatum HOM05D006426 ORTHO05D007737 1.5e-67 261.2 316 54.1
FvH4_6g44594 Fragaria vesca HOM05D006426 ORTHO05D007737 5.5e-67 259.2 168 82.7
BraA01t01897Z Brassica rapa HOM05D006426 ORTHO05D007737 3.6e-66 256.5 439 44.2
Aa31LG2G22090 Aethionema arabicum HOM05D006426 ORTHO05D007737 2.3e-65 253.8 439 42.4
SGA_v2.0_scaffold49G18304 Striga asiatica HOM05D006426 ORTHO05D007737 1.4e-62 244.6 498 39.0
BolC1t02416H Brassica oleracea HOM05D006426 ORTHO05D007737 3.2e-59 233.4 441 42.2
C01p24670 Brassica napus HOM05D006426 ORTHO05D007737 7.2e-59 232.3 441 42.0
BcaC09g50504 Brassica carinata HOM05D006426 ORTHO05D007737 6.8e-57 225.7 439 41.0
DCAR_012977 Daucus carota HOM05D006426 ORTHO05D007737 1.5e-56 224.6 448 39.3
Lj3g0000273 Lotus japonicus HOM05D006426 ORTHO05D007737 2.0e-56 224.2 468 40.2
Aqoxy1G03895 Aquilegia oxysepala HOM05D006426 ORTHO05D007737 3.1e-54 216.9 520 36.3
MBI18_g45419_MAGBIO Magnolia biondii HOM05D006426 ORTHO05D007737 3.5e-53 213.4 487 39.2
VMungo1080G0900 Vigna mungo HOM05D006426 ORTHO05D007737 7.7e-53 212.2 422 40.3
PSO832G1174 Papaver somniferum HOM05D006426 ORTHO05D007737 1.0e-52 211.8 462 39.4
HanXRQChr15g0488091 Helianthus annuus HOM05D006426 ORTHO05D007737 2.5e-51 207.2 448 39.1
PSO210G4394 Papaver somniferum HOM05D006426 ORTHO05D007737 3.2e-51 206.8 462 37.7
Lsat_1_v5_gn_4_69460 Lactuca sativa HOM05D006426 ORTHO05D007737 7.2e-51 205.7 467 40.0
Phvul.005G017100 Phaseolus vulgaris HOM05D006426 ORTHO05D007737 4.7e-50 203.0 421 39.4
Lalb_Chr01g0017281 Lupinus albus HOM05D006426 ORTHO05D007737 1.4e-49 201.4 477 36.1
unitig_52.g17339 Utricularia gibba HOM05D006426 ORTHO05D007737 1.4e-49 201.4 456 40.1
Glyma.11G158800 Glycine max HOM05D006426 ORTHO05D007737 2.3e-49 200.7 423 38.5
Glyma.04G132700 Glycine max HOM05D006426 ORTHO05D007737 1.6e-45 188.0 431 37.8
PSO675G8522 Papaver somniferum HOM05D006426 ORTHO05D007737 5.9e-45 186.0 505 35.2
Sed0009175 Sechium edule HOM05D006426 ORTHO05D007737 1.7e-44 184.5 383 39.2
PSO541G1576 Papaver somniferum HOM05D006426 ORTHO05D007737 2.5e-43 180.6 506 34.6
ECA232G2383 Erigeron canadensis HOM05D006426 ORTHO05D007737 1.2e-42 178.3 471 35.9
Medtr3g013540 Medicago truncatula HOM05D006426 ORTHO05D007737 1.5e-40 171.4 456 35.3
Psat5g223040 Pisum sativum HOM05D006426 ORTHO05D007737 2.2e-39 167.5 452 35.8
SGA_v2.0_scaffold159G37625 Striga asiatica HOM05D006426 ORTHO05D007737 4.3e-35 153.3 430 33.7
ATR0693G210 Amborella trichopoda HOM05D006426 ORTHO05D007737 2.9e-31 140.6 525 33.1
TPR.G1458 Trifolium pratense HOM05D006426 ORTHO05D007737 4.1e-30 136.7 469 33.5
Ca_18074_v3 Cicer arietinum L. HOM05D006426 ORTHO05D007737 3.9e-28 130.2 445 33.5
Lj1P736T39 Lonicera japonica HOM05D006426 ORTHO05D007737 1.6e-21 108.2 178 44.4
unitig_62.g23190 Utricularia gibba HOM05D006426 ORTHO05D007737 1.5e-19 101.7 162 42.6
GSVIVG01030006001 Vitis vinifera HOM05D006426 ORTHO05D007737 1.8e-17 94.7 144 45.1
HPP92_011117 Vanilla planifolia HOM05D006426 ORTHO05D007737 8.9e-17 92.4 447 29.8
CDE10G0475 Ceratophyllum demersum HOM05D006426 ORTHO05D007737 5.8e-16 89.7 492 27.4
Oeu029930.1 Olea europaea HOM05D006426 ORTHO05D007737 1.6e-13 81.6 145 37.9
Oeu035359.1 Olea europaea HOM05D006426 ORTHO05D007737 2.1e-13 81.3 145 37.9
FvH4_3g16300 Fragaria vesca HOM05D000075 ORTHO05D007737 4.6e-13 80.1 74 70.3
Oeu003230.1 Olea europaea HOM05D006426 ORTHO05D007737 1.3e-12 78.6 145 37.9
HPP92_011122 Vanilla planifolia HOM05D006426 ORTHO05D007737 1.7e-12 78.2 411 28.7
SabraUnG0004200 Salix brachista HOM05D006426 ORTHO05D007737 7.3e-11 72.8 76 50.0
FvH4_6g12751 Fragaria vesca HOM05D006426 ORTHO05D007737 2.0e-08 64.7 60 68.3
SGA_v2.0_scaffold51G18895 Striga asiatica HOM05D001803 ORTHO05D001686 1.7e-07 61.6 147 37.4
Atru.chr6.3075 Acer truncatum HOM05D006426 ORTHO05D007737 1.1e-06 58.9 67 47.8


User provided reference genes

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