Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G4183 Fragaria x ananassa HOM05D006115 ORTHO05D007528 3.8e-83 311.6 176 100.0
FAN09G2594 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.1e-82 310.1 176 98.9
RcHm_v2.0_Chr2g0162381 Rosa chinensis HOM05D006115 ORTHO05D007528 5.7e-79 297.7 176 91.5
FvH4_6g45050 Fragaria vesca HOM05D006115 ORTHO05D007528 1.3e-78 296.6 176 92.0
FAN14G2522 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.3e-78 296.6 176 92.0
FAN05G1351 Fragaria x ananassa HOM05D006115 ORTHO05D007528 2.0e-76 289.3 173 93.6
MD09G1090500 Malus domestica HOM05D006115 ORTHO05D007528 5.4e-69 264.6 180 81.1
MD17G1079700 Malus domestica HOM05D006115 ORTHO05D007528 1.6e-68 263.1 180 81.1
Prupe.3G235100 Prunus persica HOM05D006115 ORTHO05D007528 1.3e-67 260.0 179 80.4
Cfa014568 Carpinus fangiana HOM05D006115 ORTHO05D007528 8.3e-62 240.7 176 78.4
QL08p037826 Quercus lobata HOM05D006115 ORTHO05D007528 7.8e-60 234.2 180 76.1
Haze_13113 Corylus avellana HOM05D006115 ORTHO05D007528 1.3e-59 233.4 176 77.3
Lj3g0001000 Lotus japonicus HOM05D006115 ORTHO05D007528 4.7e-57 224.9 176 71.0
COL.COLO4_35403 Corchorus olitorius HOM05D006115 ORTHO05D007528 1.0e-56 223.8 177 71.2
CiPaw.04G123900 Carya illinoinensis HOM05D006115 ORTHO05D007528 3.0e-56 222.2 178 73.6
Duzib132G1267 Durio zibethinus HOM05D006115 ORTHO05D007528 5.2e-56 221.5 179 72.6
CANSAT64G2665 Cannabis sativa HOM05D006115 ORTHO05D007528 3.4e-55 218.8 176 70.5
Eucgr.K00947 Eucalyptus grandis HOM05D006115 ORTHO05D007528 4.4e-55 218.4 178 70.2
Medtr2g090200 Medicago truncatula HOM05D006115 ORTHO05D007528 3.7e-54 215.3 176 69.9
Potri.005G206200 Populus trichocarpa HOM05D006115 ORTHO05D007528 1.1e-53 213.8 178 68.5
Glyma.12G202500 Glycine max HOM05D006115 ORTHO05D007528 1.8e-53 213.0 180 73.3
PSO210G0967 Papaver somniferum HOM05D006115 ORTHO05D007528 3.2e-53 212.2 179 65.9
Psat7g036720 Pisum sativum HOM05D006115 ORTHO05D007528 5.4e-53 211.5 176 69.3
Sabra05G0156800 Salix brachista HOM05D006115 ORTHO05D007528 5.4e-53 211.5 178 68.0
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 7.0e-53 211.1 176 66.5
Phvul.005G105900 Phaseolus vulgaris HOM05D006115 ORTHO05D007528 9.2e-53 210.7 176 67.6
PSO832G3416 Papaver somniferum HOM05D006115 ORTHO05D007528 1.2e-52 210.3 179 65.4
Nn1g03988 Nelumbo nucifera HOM05D006115 ORTHO05D007528 2.7e-52 209.1 178 66.3
Lalb_Chr14g0366761 Lupinus albus HOM05D006115 ORTHO05D007528 5.9e-52 208.0 176 69.3
Potri.002G056300 Populus trichocarpa HOM05D006115 ORTHO05D007528 5.9e-52 208.0 179 65.4
VMungo1080G1219 Vigna mungo HOM05D006115 ORTHO05D007528 5.9e-52 208.0 176 69.9
Duzib248G0317 Durio zibethinus HOM05D006115 ORTHO05D007528 7.8e-52 207.6 177 69.5
Lalb_Chr24g0399841 Lupinus albus HOM05D006115 ORTHO05D007528 1.0e-51 207.2 180 67.8
Rhsim06G0148500 Rhododendron simsii HOM05D006115 ORTHO05D007528 1.3e-51 206.8 172 66.3
Sabra02G0045600 Salix brachista HOM05D006115 ORTHO05D007528 2.3e-51 206.1 179 66.5
Ciclev10016927m.g Citrus clementina HOM05D006115 ORTHO05D007528 3.0e-51 205.7 177 66.1
MBI02_g19258_MAGBIO Magnolia biondii HOM05D006115 ORTHO05D007528 3.0e-51 205.7 176 67.0
Nitab4.5_0001090g0130 Nicotiana tabacum HOM05D006115 ORTHO05D007528 3.0e-51 205.7 179 68.7
GSVIVG01030552001 Vitis vinifera HOM05D006115 ORTHO05D007528 3.9e-51 205.3 176 69.3
CSS0015532 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 5.0e-51 204.9 177 68.4
CSS0031699 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 5.0e-51 204.9 177 68.4
ClCG02G001140 Citrullus lanatus HOM05D006115 ORTHO05D007528 5.0e-51 204.9 178 66.9
TWI75G0783 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 6.6e-51 204.5 178 68.5
Thecc.02G175700 Theobroma cacao HOM05D006115 ORTHO05D007528 8.6e-51 204.1 176 69.9
MELO3C018748.2 Cucumis melo HOM05D006115 ORTHO05D007528 1.1e-50 203.8 178 65.7
HanXRQChr17g0542591 Helianthus annuus HOM05D006115 ORTHO05D007528 1.5e-50 203.4 178 68.5
Oeu040003.1 Olea europaea HOM05D006115 ORTHO05D007528 1.9e-50 203.0 177 66.7
CsaV3_7G004300 Cucumis sativus L. HOM05D006115 ORTHO05D007528 3.3e-50 202.2 178 65.7
Sopen07g028230 Solanum pennellii HOM05D006115 ORTHO05D007528 3.3e-50 202.2 178 67.4
Manes.08G098700 Manihot esculenta HOM05D006115 ORTHO05D007528 5.6e-50 201.4 176 69.3
Gohir.A01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 9.5e-50 200.7 179 65.4
TWI18G1016 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 9.5e-50 200.7 176 67.6
Nitab4.5_0005380g0050 Nicotiana tabacum HOM05D006115 ORTHO05D007528 1.2e-49 200.3 178 65.7
PGR142G3842 Punica granatum HOM05D006115 ORTHO05D007528 1.2e-49 200.3 185 64.3
Solyc07g054290.1 Solanum lycopersicum HOM05D006115 ORTHO05D007528 1.2e-49 200.3 178 67.4
PGSC0003DMG400018360 Solanum tuberosum HOM05D006115 ORTHO05D007528 1.6e-49 199.9 178 66.9
Gohir.A12G137300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 2.1e-49 199.5 179 65.4
Hma1.2p1_0875F.1_g231400 Hydrangea macrophylla HOM05D006115 ORTHO05D007528 4.7e-49 198.4 179 69.3
Gorai.002G017600 Gossypium raimondii HOM05D006115 ORTHO05D007528 6.2e-49 198.0 179 64.2
Oeu029929.1 Olea europaea HOM05D006115 ORTHO05D007528 6.2e-49 198.0 177 65.0
Gohir.D01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 8.0e-49 197.6 179 64.2
Sed0024793 Sechium edule HOM05D006115 ORTHO05D007528 1.1e-48 197.2 178 65.7
Peaxi162Scf00610g00313 Petunia axillaris HOM05D006115 ORTHO05D007528 1.8e-48 196.4 179 65.9
Cc05_g06750 Coffea canephora HOM05D006115 ORTHO05D007528 2.3e-48 196.1 181 65.2
Glyma.13G299200 Glycine max HOM05D006115 ORTHO05D007528 2.3e-48 196.1 176 69.3
TPR.G35547 Trifolium pratense HOM05D006115 ORTHO05D007528 2.3e-48 196.1 177 67.2
Atru.chr6.3034 Acer truncatum HOM05D006115 ORTHO05D007528 4.0e-48 195.3 182 67.0
Gohir.D12G141300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 5.2e-48 194.9 178 67.4
CDE05G3372 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 6.8e-48 194.5 182 62.6
Gorai.008G152600 Gossypium raimondii HOM05D006115 ORTHO05D007528 6.8e-48 194.5 178 67.4
Sed0009578 Sechium edule HOM05D006115 ORTHO05D007528 6.8e-48 194.5 177 63.3
Peaxi162Scf00132g00062 Petunia axillaris HOM05D006115 ORTHO05D007528 1.5e-47 193.4 178 63.5
Migut.H01055 Erythranthe guttata HOM05D006115 ORTHO05D007528 9.8e-47 190.7 183 64.5
Ah.08g220260 Amaranthus hybridus HOM05D006115 ORTHO05D007528 1.3e-46 190.3 181 60.8
Lsat_1_v5_gn_3_39480 Lactuca sativa HOM05D006115 ORTHO05D007528 1.7e-46 189.9 176 65.3
AUR62028441 Chenopodium quinoa HOM05D006115 ORTHO05D007528 2.9e-46 189.1 181 61.9
MSTRG.12305 Avicennia marina HOM05D006115 ORTHO05D007528 4.9e-46 188.3 180 62.8
MSTRG.14200 Avicennia marina HOM05D006115 ORTHO05D007528 6.4e-46 188.0 182 63.7
AUR62041946 Chenopodium quinoa HOM05D006115 ORTHO05D007528 3.2e-45 185.7 183 58.5
DCAR_019192 Daucus carota HOM05D006115 ORTHO05D007528 7.0e-45 184.5 178 61.8
Actinidia09875 Actinidia chinensis HOM05D006115 ORTHO05D007528 6.0e-44 181.4 131 74.8
THA.LOC104827374 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 6.0e-44 181.4 134 70.1
Duzib052G1052 Durio zibethinus HOM05D006115 ORTHO05D007528 1.3e-43 180.3 165 66.7
Lj1P733T48 Lonicera japonica HOM05D006115 ORTHO05D007528 1.7e-43 179.9 131 73.3
AL1G13100 Arabidopsis lyrata HOM05D006115 ORTHO05D007528 2.3e-43 179.5 135 71.9
HPP92_017628 Vanilla planifolia HOM05D006115 ORTHO05D007528 2.3e-43 179.5 136 69.9
Lj8P115T48 Lonicera japonica HOM05D006115 ORTHO05D007528 3.9e-43 178.7 115 80.9
unitig_749.g13954 Utricularia gibba HOM05D006115 ORTHO05D007528 3.9e-43 178.7 180 60.6
Aa31LG1G20930 Aethionema arabicum HOM05D006115 ORTHO05D007528 5.0e-43 178.3 176 59.7
Os03g0333400 Oryza sativa ssp. japonica HOM05D006115 ORTHO05D007528 5.0e-43 178.3 167 61.1
unitig_26.g9943 Utricularia gibba HOM05D006115 ORTHO05D007528 5.0e-43 178.3 181 59.1
Dinv03833 Davidia involucrata HOM05D006115 ORTHO05D007528 8.6e-43 177.6 163 65.6
BcaB02g06915 Brassica carinata HOM05D006115 ORTHO05D007528 3.3e-42 175.6 136 69.1
THA.LOC104801178 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 3.3e-42 175.6 114 76.3
Thhalv10008901m.g Eutrema salsugineum HOM05D006115 ORTHO05D007528 4.3e-42 175.3 136 71.3
Sp1g02510 Schrenkiella parvula HOM05D006115 ORTHO05D007528 4.3e-42 175.3 136 69.1
AT1G03600 Arabidopsis thaliana HOM05D006115 ORTHO05D007528 5.6e-42 174.9 165 61.2
BcaC05g24519 Brassica carinata HOM05D006115 ORTHO05D007528 7.3e-42 174.5 136 69.1
C05p02030 Brassica napus HOM05D006115 ORTHO05D007528 7.3e-42 174.5 136 69.1
Zm00001eb015950 Zea mays HOM05D006115 ORTHO05D007528 7.3e-42 174.5 136 71.3
CARHR002940 Cardamine hirsuta HOM05D006115 ORTHO05D007528 1.2e-41 173.7 135 69.6
BolC8t46868H Brassica oleracea HOM05D006115 ORTHO05D007528 2.8e-41 172.6 136 68.4
A08p37300 Brassica napus HOM05D006115 ORTHO05D007528 3.6e-41 172.2 137 67.2
Carub.0001s0272 Capsella rubella HOM05D006115 ORTHO05D007528 3.6e-41 172.2 176 61.9
Zm00001eb395230 Zea mays HOM05D006115 ORTHO05D007528 6.2e-41 171.4 138 69.6
Sc12g0002830 Simmondsia chinensis HOM05D006115 ORTHO05D007528 1.4e-40 170.2 103 82.5
BcaC07g36953 Brassica carinata HOM05D006115 ORTHO05D007528 1.8e-40 169.9 137 66.4
C08p00700 Brassica napus HOM05D006115 ORTHO05D007528 1.8e-40 169.9 137 66.4
ECA246G1074 Erigeron canadensis HOM05D006115 ORTHO05D007528 2.3e-40 169.5 177 56.5
A10p02120 Brassica napus HOM05D006115 ORTHO05D007528 4.0e-40 168.7 178 57.9
BolC5t28981H Brassica oleracea HOM05D006115 ORTHO05D007528 4.0e-40 168.7 178 57.9
BraA08t35627Z Brassica rapa HOM05D006115 ORTHO05D007528 5.2e-40 168.3 178 57.9
SGA_v2.0_scaffold356G49787 Striga asiatica HOM05D006115 ORTHO05D007528 8.9e-40 167.5 172 60.5
BraA10t42481Z Brassica rapa HOM05D006115 ORTHO05D007528 1.1e-37 160.6 178 55.6
SEGI_04908 Sequoiadendron giganteum HOM05D006115 ORTHO05D007528 8.6e-35 151.0 110 67.3
Ca_01513_v3 Cicer arietinum L. HOM05D006115 ORTHO05D007528 4.7e-33 145.2 85 83.5
Actinidia11067 Actinidia chinensis HOM05D006115 ORTHO05D007528 1.4e-29 133.7 143 61.5
SMO364G0930 Selaginella moellendorffii HOM05D006115 ORTHO05D007528 3.2e-29 132.5 139 55.4
CDE05G0569 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 1.3e-27 127.1 145 53.8
Pp3c9_26020 Physcomitrium patens HOM05D006115 ORTHO05D007528 1.3e-27 127.1 167 46.1
Mapoly0049s0056 Marchantia polymorpha HOM05D006115 ORTHO05D007528 1.7e-27 126.7 176 44.9
TAR627G0228 Trochodendron aralioides HOM05D006115 ORTHO05D007528 2.5e-26 122.9 124 61.3
AagrBONN_evm.TU.Sc2ySwM_228.954 Anthoceros agrestis HOM05D006115 ORTHO05D007528 9.6e-26 120.9 136 48.5
CBR_g50764 Chara braunii HOM05D006115 ORTHO05D007528 1.6e-25 120.2 115 53.0
MCO14G469 Micromonas commoda HOM05D006115 ORTHO05D007528 3.9e-19 99.0 138 41.3
Cre05.g243800 Chlamydomonas reinhardtii HOM05D006115 ORTHO05D007528 2.5e-18 96.3 141 41.8
ATR0693G305 Amborella trichopoda HOM05D006115 ORTHO05D007528 1.3e-17 94.0 134 47.0
Dinv23684 Davidia involucrata HOM05D006115 ORTHO05D007528 4.9e-14 82.0 170 45.9
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 6.4e-06 55.1 100 28.0
MD16G1193700 Malus domestica HOM05D007072 ORTHO05D008841 6.4e-06 55.1 98 28.6


User provided reference genes

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