Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G4118 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.6e-189 666.0 347 100.0
FAN14G5902 Fragaria x ananassa HOM05D006917 ORTHO05D008297 2.4e-185 652.1 347 97.1
FAN09G3443 Fragaria x ananassa HOM05D006917 ORTHO05D008297 3.1e-185 651.7 347 97.7
FvH4_6g44760 Fragaria vesca HOM05D006917 ORTHO05D008297 1.2e-184 649.8 347 96.8
FAN05G2664 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.3e-175 619.8 347 94.8
RcHm_v2.0_Chr2g0161911 Rosa chinensis HOM05D006917 ORTHO05D008297 4.9e-167 591.3 347 87.9
Prupe.3G231600 Prunus persica HOM05D006917 ORTHO05D008297 1.5e-144 516.5 347 76.7
MD09G1093800 Malus domestica HOM05D006917 ORTHO05D008297 5.9e-136 488.0 347 72.3
Cfa014546 Carpinus fangiana HOM05D006917 ORTHO05D008297 3.1e-121 439.1 349 68.2
Haze_13090 Corylus avellana HOM05D006917 ORTHO05D008297 7.0e-121 438.0 352 67.9
CANSAT64G1157 Cannabis sativa HOM05D006917 ORTHO05D008297 1.5e-118 430.3 351 65.0
CiPaw.03G170000 Carya illinoinensis HOM05D006917 ORTHO05D008297 4.8e-114 415.2 352 63.6
QL08p037351 Quercus lobata HOM05D006917 ORTHO05D008297 5.0e-111 405.2 356 62.4
COL.COLO4_13687 Corchorus olitorius HOM05D006917 ORTHO05D008297 1.4e-108 397.1 353 60.1
Atru.chr6.3069 Acer truncatum HOM05D006917 ORTHO05D008297 2.3e-108 396.4 335 63.6
Cpa.g.sc53.106 Carica papaya HOM05D006917 ORTHO05D008297 6.3e-106 388.3 360 60.3
Dinv15489 Davidia involucrata HOM05D006917 ORTHO05D008297 8.3e-106 387.9 360 57.8
Gohir.A13G056900 Gossypium hirsutum HOM05D006917 ORTHO05D008297 4.1e-105 385.6 354 59.9
Gorai.013G073800 Gossypium raimondii HOM05D006917 ORTHO05D008297 5.4e-105 385.2 353 59.2
Manes.13G151300 Manihot esculenta HOM05D006917 ORTHO05D008297 1.6e-104 383.6 352 59.7
Duzib132G0607 Durio zibethinus HOM05D006917 ORTHO05D008297 2.0e-104 383.3 350 59.1
Thecc.02G172300 Theobroma cacao HOM05D006917 ORTHO05D008297 1.7e-103 380.2 354 59.3
Ciclev10015637m.g Citrus clementina HOM05D006917 ORTHO05D008297 1.1e-102 377.5 356 59.0
PGR042G0968 Punica granatum HOM05D006917 ORTHO05D008297 4.2e-102 375.6 348 59.2
Eucgr.D00334 Eucalyptus grandis HOM05D006917 ORTHO05D008297 1.2e-101 374.0 267 70.4
TWI36G0541 Tripterygium wilfordii HOM05D006917 ORTHO05D008297 8.0e-101 371.3 335 58.8
Hma1.2p1_0565F.1_g179500 Hydrangea macrophylla HOM05D006917 ORTHO05D008297 1.2e-99 367.5 360 56.9
Lj3g0010136 Lotus japonicus HOM05D006917 ORTHO05D008297 1.3e-98 364.0 355 56.9
Potri.013G146900 Populus trichocarpa HOM05D006917 ORTHO05D008297 3.7e-98 362.5 360 58.6
ClCG01G000980 Citrullus lanatus HOM05D006917 ORTHO05D008297 5.4e-97 358.6 354 56.8
Gohir.D13G065000 Gossypium hirsutum HOM05D006917 ORTHO05D008297 7.0e-97 358.2 256 68.0
CSS0047204 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 3.5e-96 355.9 363 55.1
MELO3C005833.2 Cucumis melo HOM05D006917 ORTHO05D008297 1.3e-95 354.0 352 56.5
THA.LOC104825523 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 1.3e-95 354.0 297 61.6
CSS0012077 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 1.7e-95 353.6 363 55.1
Sed0009072 Sechium edule HOM05D006917 ORTHO05D008297 3.9e-95 352.4 351 56.7
Sabra13G0118400 Salix brachista HOM05D006917 ORTHO05D008297 8.6e-95 351.3 353 57.2
Phvul.011G111800 Phaseolus vulgaris HOM05D006917 ORTHO05D008297 2.1e-93 346.7 353 54.4
Carub.0007s1255 Capsella rubella HOM05D006917 ORTHO05D008297 3.6e-93 345.9 286 64.0
THA.LOC104807893 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 3.6e-93 345.9 322 55.6
VMungo1127G0570 Vigna mungo HOM05D006917 ORTHO05D008297 3.6e-93 345.9 353 53.8
GSVIVG01030015001 Vitis vinifera HOM05D006917 ORTHO05D008297 1.4e-92 344.0 256 66.0
BolC7t46080H Brassica oleracea HOM05D006917 ORTHO05D008297 1.8e-92 343.6 301 62.1
Sopen10g004420 Solanum pennellii HOM05D006917 ORTHO05D008297 2.3e-92 343.2 357 52.9
Solyc10g008600.3 Solanum lycopersicum HOM05D006917 ORTHO05D008297 6.8e-92 341.7 356 52.5
A03p57910 Brassica napus HOM05D006917 ORTHO05D008297 1.2e-91 340.9 284 64.1
AL7G24390 Arabidopsis lyrata HOM05D006917 ORTHO05D008297 2.0e-91 340.1 266 65.8
AT4G28210 Arabidopsis thaliana HOM05D006917 ORTHO05D008297 2.0e-91 340.1 266 65.0
CsaV3_5G001130 Cucumis sativus L. HOM05D006917 ORTHO05D008297 3.4e-91 339.3 351 55.8
Thhalv10025608m.g Eutrema salsugineum HOM05D006917 ORTHO05D008297 3.4e-91 339.3 286 62.9
C07p56030 Brassica napus HOM05D006917 ORTHO05D008297 7.5e-91 338.2 272 65.4
BraA03t14855Z Brassica rapa HOM05D006917 ORTHO05D008297 7.5e-91 338.2 272 65.4
Lalb_Chr19g0135451 Lupinus albus HOM05D006917 ORTHO05D008297 7.5e-91 338.2 352 53.4
Lalb_Chr03g0029201 Lupinus albus HOM05D006917 ORTHO05D008297 2.2e-90 336.7 348 53.2
Sp7g26170 Schrenkiella parvula HOM05D006917 ORTHO05D008297 3.7e-90 335.9 286 62.6
PGSC0003DMG401021671 Solanum tuberosum HOM05D006917 ORTHO05D008297 3.7e-90 335.9 357 52.4
Glyma.12G107100 Glycine max HOM05D006917 ORTHO05D008297 6.4e-90 335.1 313 56.9
CARHR235920 Cardamine hirsuta HOM05D006917 ORTHO05D008297 8.3e-90 334.7 342 55.3
Peaxi162Scf00608g00317 Petunia axillaris HOM05D006917 ORTHO05D008297 1.4e-89 334.0 349 53.3
BcaNung01588 Brassica carinata HOM05D006917 ORTHO05D008297 1.9e-89 333.6 286 60.8
Psat7g195960 Pisum sativum HOM05D006917 ORTHO05D008297 7.0e-89 331.6 349 52.1
arahy.Tifrunner.gnm1.ann1.RY5XZD Arachis hypogaea HOM05D006917 ORTHO05D008297 9.2e-89 331.3 312 56.4
arahy.Tifrunner.gnm1.ann1.43ZBCD Arachis hypogaea HOM05D006917 ORTHO05D008297 1.2e-88 330.9 268 62.7
HanXRQChr06g0170991 Helianthus annuus HOM05D006917 ORTHO05D008297 3.5e-88 329.3 328 56.1
Ca_20697_v3 Cicer arietinum L. HOM05D006917 ORTHO05D008297 7.8e-88 328.2 350 52.0
AUR62044684 Chenopodium quinoa HOM05D006917 ORTHO05D008297 1.3e-87 327.4 321 55.5
A01p19630 Brassica napus HOM05D006917 ORTHO05D008297 1.7e-87 327.0 286 61.9
Cc05_g06310 Coffea canephora HOM05D006917 ORTHO05D008297 1.7e-87 327.0 255 64.3
Glyma.06G298100 Glycine max HOM05D006917 ORTHO05D008297 3.0e-87 326.2 329 54.4
Aa31LG2G22070 Aethionema arabicum HOM05D006917 ORTHO05D008297 3.9e-87 325.9 305 59.3
DCAR_009726 Daucus carota HOM05D006917 ORTHO05D008297 3.9e-87 325.9 353 52.7
Ah.04g154320 Amaranthus hybridus HOM05D006917 ORTHO05D008297 7.3e-86 321.6 283 58.7
ECA246G1823 Erigeron canadensis HOM05D006917 ORTHO05D008297 1.2e-85 320.9 266 60.9
PSO832G2257 Papaver somniferum HOM05D006917 ORTHO05D008297 3.6e-85 319.3 366 50.8
Lsat_1_v5_gn_3_39800 Lactuca sativa HOM05D006917 ORTHO05D008297 1.1e-84 317.8 346 52.6
EL10Ac9g22343 Beta vulgaris HOM05D006917 ORTHO05D008297 1.8e-84 317.0 277 59.9
BraA01t01896Z Brassica rapa HOM05D006917 ORTHO05D008297 1.8e-84 317.0 288 60.8
PSO210G6334 Papaver somniferum HOM05D006917 ORTHO05D008297 3.1e-84 316.2 366 50.3
TPR.G21667 Trifolium pratense HOM05D006917 ORTHO05D008297 3.1e-84 316.2 341 50.7
AUR62037382 Chenopodium quinoa HOM05D006917 ORTHO05D008297 5.2e-84 315.5 342 52.6
Nn1g03886 Nelumbo nucifera HOM05D006917 ORTHO05D008297 2.0e-83 313.5 317 55.5
Actinidia30487 Actinidia chinensis HOM05D006917 ORTHO05D008297 1.3e-82 310.8 371 49.9
Sc21g0002460 Simmondsia chinensis HOM05D006917 ORTHO05D008297 1.3e-82 310.8 311 54.0
Medtr4g046023 Medicago truncatula HOM05D006917 ORTHO05D008297 3.7e-82 309.3 342 50.9
Migut.M00331 Erythranthe guttata HOM05D006917 ORTHO05D008297 1.1e-81 307.8 299 52.8
MSTRG.18638 Avicennia marina HOM05D006917 ORTHO05D008297 1.4e-81 307.4 266 59.8
Hund08056 Selenicereus undatus HOM05D006917 ORTHO05D008297 1.9e-81 307.0 341 51.0
BcaC09g50505 Brassica carinata HOM05D006917 ORTHO05D008297 7.1e-81 305.1 273 59.7
C01p24650 Brassica napus HOM05D006917 ORTHO05D008297 1.6e-80 303.9 247 63.6
MBI19_g29221_MAGBIO Magnolia biondii HOM05D006917 ORTHO05D008297 3.5e-80 302.8 262 59.9
SalBow7G0082 Salvia bowleyana HOM05D006917 ORTHO05D008297 1.7e-79 300.4 391 47.1
BcaC06g32638 Brassica carinata HOM05D006917 ORTHO05D008297 3.9e-79 299.3 272 61.0
Aqoxy3G03605 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 8.6e-79 298.1 353 50.4
HPP92_002192 Vanilla planifolia HOM05D006917 ORTHO05D008297 1.5e-78 297.4 271 56.1
SGA_v2.0_scaffold70G23465 Striga asiatica HOM05D006917 ORTHO05D008297 1.2e-77 294.3 281 54.8
unitig_746.g26713 Utricularia gibba HOM05D006917 ORTHO05D008297 2.1e-77 293.5 270 55.6
MD17G1083500 Malus domestica HOM05D006917 ORTHO05D008297 4.4e-75 285.8 218 68.8
BolC1t02415H Brassica oleracea HOM05D006917 ORTHO05D008297 3.5e-72 276.2 247 59.9
TAR629G2913 Trochodendron aralioides HOM05D006917 ORTHO05D008297 6.0e-72 275.4 299 52.8
Nitab4.5_0000635g0150 Nicotiana tabacum HOM05D006917 ORTHO05D008297 5.1e-71 272.3 356 48.3
Lj8P117T42 Lonicera japonica HOM05D006917 ORTHO05D008297 3.3e-70 269.6 234 59.0
CDE12G0159 Ceratophyllum demersum HOM05D006917 ORTHO05D008297 3.6e-69 266.2 267 51.7
Nitab4.5_0003195g0010 Nicotiana tabacum HOM05D006917 ORTHO05D008297 1.4e-68 264.2 231 60.2
PGSC0003DMG400029584 Solanum tuberosum HOM05D006917 ORTHO05D008297 4.4e-67 259.2 209 60.3
ATR0693G234 Amborella trichopoda HOM05D006917 ORTHO05D008297 3.9e-55 219.5 237 51.9
arahy.Tifrunner.gnm1.ann1.C6FW5S Arachis hypogaea HOM05D006917 ORTHO05D008297 2.5e-41 173.7 160 55.6
arahy.Tifrunner.gnm1.ann1.29DNDL Arachis hypogaea HOM05D006917 ORTHO05D008297 2.0e-35 154.1 136 58.8
SEGI_04255 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 4.3e-22 109.8 286 31.1
MD17G1083600 Malus domestica HOM05D006917 ORTHO05D008297 2.8e-21 107.1 74 68.9
AagrBONN_evm.TU.Sc2ySwM_228.5823 Anthoceros agrestis HOM05D006917 ORTHO05D008297 5.9e-19 99.4 289 28.0
SEGI_37556 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 7.0e-12 75.9 197 31.5
Pp3c7_25590 Physcomitrium patens HOM05D037891 ORTHO05D008297 1.3e-10 71.6 260 27.3
Oeu039864.1 Olea europaea HOM05D006917 ORTHO05D008297 2.2e-10 70.9 132 38.6
Pp3c2_31610 Physcomitrium patens HOM05D037891 ORTHO05D008297 5.0e-10 69.7 300 24.3
SMO300G0012 Selaginella moellendorffii HOM05D006917 ORTHO05D008297 5.0e-10 69.7 273 26.7
Cpa.g.sc609.4 Carica papaya HOM05D006917 ORTHO05D008297 2.3e-07 60.8 89 40.4
Aqoxy3G03603 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 1.5e-06 58.2 74 51.4
ATR0693G306 Amborella trichopoda HOM05D006917 ORTHO05D008297 4.4e-06 56.6 72 45.8


User provided reference genes

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