Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G4109 Fragaria x ananassa HOM05D004779 ORTHO05D005737 6.7e-77 290.8 168 100.0
FAN22G0927 Fragaria x ananassa HOM05D004779 ORTHO05D013607 4.5e-73 278.1 167 91.6
FvH4_3g26940 Fragaria vesca HOM05D004779 ORTHO05D005737 4.3e-68 261.5 168 88.1
FAN21G0778 Fragaria x ananassa HOM05D011291 ORTHO05D005737 8.2e-67 257.3 169 87.6
FAN11G2927 Fragaria x ananassa HOM05D004779 ORTHO05D005737 2.4e-66 255.8 172 86.0
FAN16G1882 Fragaria x ananassa HOM05D004779 ORTHO05D005737 9.0e-66 253.8 174 85.1
FAN25G2723 Fragaria x ananassa HOM05D004779 ORTHO05D005737 9.0e-66 253.8 174 85.1
RcHm_v2.0_Chr5g0049381 Rosa chinensis HOM05D004779 ORTHO05D005737 7.9e-62 240.7 167 79.6
FAN21G1171 Fragaria x ananassa HOM05D004779 ORTHO05D005737 4.1e-50 201.8 146 82.9
MD11G1177500 Malus domestica HOM05D004779 ORTHO05D005737 2.9e-48 195.7 178 68.0
Prupe.6G149600 Prunus persica HOM05D004779 ORTHO05D005737 4.7e-46 188.3 184 67.9
MD03G1161400 Malus domestica HOM05D004779 ORTHO05D005737 2.6e-41 172.6 170 64.7
Glyma.02G271700 Glycine max HOM05D004779 ORTHO05D005737 9.4e-39 164.1 172 69.8
Phvul.008G210200 Phaseolus vulgaris HOM05D004779 ORTHO05D005737 1.2e-38 163.7 172 66.9
Glyma.14G044700 Glycine max HOM05D004779 ORTHO05D005737 6.1e-38 161.4 172 66.9
GSVIVG01037513001 Vitis vinifera HOM05D004779 ORTHO05D005737 6.1e-38 161.4 171 67.3
Nn2g14463 Nelumbo nucifera HOM05D004779 ORTHO05D005737 1.1e-36 157.1 171 60.8
VMungo0647G2327 Vigna mungo HOM05D004779 ORTHO05D005737 1.5e-36 156.8 172 65.7
CANSAT54G2495 Cannabis sativa HOM05D004779 ORTHO05D005737 1.7e-35 153.3 181 62.4
Ca_06128_v3 Cicer arietinum L. HOM05D004779 ORTHO05D005737 3.7e-35 152.1 170 64.1
Hma1.2p1_0218F.1_g092300 Hydrangea macrophylla HOM05D004779 ORTHO05D005737 4.8e-35 151.8 171 62.6
Dinv32142 Davidia involucrata HOM05D004779 ORTHO05D005737 1.8e-34 149.8 171 57.9
CiPaw.13G125400 Carya illinoinensis HOM05D004779 ORTHO05D005737 7.0e-34 147.9 184 59.2
Gohir.A13G221700 Gossypium hirsutum HOM05D004779 ORTHO05D005737 2.7e-33 146.0 181 54.7
arahy.Tifrunner.gnm1.ann1.3IJ79N Arachis hypogaea HOM05D004779 ORTHO05D005737 4.5e-33 145.2 169 62.1
CSS0005993 Camellia sinensis var. sinensis HOM05D004779 ORTHO05D005737 1.0e-32 144.1 172 58.1
CSS0044664 Camellia sinensis var. sinensis HOM05D004779 ORTHO05D005737 1.0e-32 144.1 172 58.1
Hund20969 Selenicereus undatus HOM05D004779 ORTHO05D005737 1.3e-32 143.7 175 54.9
Lalb_Chr04g0249841 Lupinus albus HOM05D004779 ORTHO05D005737 2.9e-32 142.5 171 62.0
Rhsim13G0199300 Rhododendron simsii HOM05D004779 ORTHO05D005737 2.9e-32 142.5 172 58.1
Duzib170G1005 Durio zibethinus HOM05D004779 ORTHO05D005737 8.5e-32 141.0 182 53.3
COL.COLO4_25354 Corchorus olitorius HOM05D004779 ORTHO05D005737 1.9e-31 139.8 188 49.5
Medtr5g086790 Medicago truncatula HOM05D004779 ORTHO05D005737 2.5e-31 139.4 168 60.7
TAR369G0205 Trochodendron aralioides HOM05D004779 ORTHO05D005737 3.2e-31 139.0 169 61.5
arahy.Tifrunner.gnm1.ann1.GQ8P42 Arachis hypogaea HOM05D004779 ORTHO05D005737 5.5e-31 138.3 169 60.9
vmacro04059 Vaccinium macrocarpon HOM05D004779 ORTHO05D005737 9.4e-31 137.5 171 55.0
CsaV3_1G004540 Cucumis sativus L. HOM05D004779 ORTHO05D005737 1.2e-30 137.1 170 55.3
TPR.G13298 Trifolium pratense HOM05D004779 ORTHO05D005737 1.2e-30 137.1 173 60.7
AUR62020193 Chenopodium quinoa HOM05D004779 ORTHO05D005737 2.1e-30 136.3 188 51.1
MELO3C017381.2 Cucumis melo HOM05D004779 ORTHO05D005737 2.7e-30 136.0 173 55.5
AUR62001587 Chenopodium quinoa HOM05D004779 ORTHO05D005737 3.6e-30 135.6 176 52.3
Lj2g0019509 Lotus japonicus HOM05D004779 ORTHO05D005737 4.7e-30 135.2 170 60.6
ClCG06G014140 Citrullus lanatus HOM05D004779 ORTHO05D005737 6.1e-30 134.8 170 55.9
Psat2g023720 Pisum sativum HOM05D004779 ORTHO05D005737 1.4e-29 133.7 171 59.1
Cc01_g08160 Coffea canephora HOM05D004779 ORTHO05D005737 4.0e-29 132.1 177 55.9
Cpa.g.sc103.54 Carica papaya HOM05D004779 ORTHO05D005737 6.8e-29 131.3 179 57.5
Gorai.013G256500 Gossypium raimondii HOM05D004779 ORTHO05D005737 3.4e-28 129.0 183 50.3
Lalb_Chr10g0105761 Lupinus albus HOM05D004779 ORTHO05D005737 5.7e-28 128.3 170 58.2
Oeu051492.1 Olea europaea HOM05D004779 ORTHO05D005737 5.7e-28 128.3 174 57.5
Sopen11g029350 Solanum pennellii HOM05D004779 ORTHO05D005737 5.7e-28 128.3 173 54.9
Nitab4.5_0008410g0030 Nicotiana tabacum HOM05D004779 ORTHO05D005737 9.8e-28 127.5 175 50.9
Sed0027738 Sechium edule HOM05D004779 ORTHO05D005737 1.3e-27 127.1 170 52.9
Sc06g0008600 Simmondsia chinensis HOM05D004779 ORTHO05D005737 2.2e-27 126.3 172 57.0
Gohir.D13G225700 Gossypium hirsutum HOM05D004779 ORTHO05D005737 3.7e-27 125.6 187 48.7
Sed0007784 Sechium edule HOM05D004779 ORTHO05D005737 8.3e-27 124.4 171 53.8
Solyc11g071680.2 Solanum lycopersicum HOM05D004779 ORTHO05D005737 3.1e-26 122.5 173 53.2
Ah.08g222510 Amaranthus hybridus HOM05D004779 ORTHO05D005737 4.5e-25 118.6 173 50.3
Duzib168G2107 Durio zibethinus HOM05D004779 ORTHO05D005737 5.9e-25 118.2 193 47.2
Peaxi162Scf01091g00011 Petunia axillaris HOM05D004779 ORTHO05D005737 5.9e-25 118.2 173 58.4
Manes.11G104300 Manihot esculenta HOM05D004779 ORTHO05D005737 7.7e-25 117.9 177 56.5
PGR119G0691 Punica granatum HOM05D004779 ORTHO05D005737 1.3e-24 117.1 180 52.2
Sabra09G0121800 Salix brachista HOM05D004779 ORTHO05D005737 1.7e-24 116.7 217 48.8
EL10Ac7g16253 Beta vulgaris HOM05D004779 ORTHO05D005737 5.0e-24 115.2 176 55.1
THA.LOC104799595 Tarenaya hassleriana HOM05D004779 ORTHO05D005737 1.9e-23 113.2 175 45.7
Potri.009G155400 Populus trichocarpa HOM05D004779 ORTHO05D005737 5.5e-23 111.7 188 52.7
Ciclev10027942m.g Citrus clementina HOM05D004779 ORTHO05D005737 1.6e-22 110.2 178 53.9
Thecc.09G267300 Theobroma cacao HOM05D004779 ORTHO05D005737 2.7e-22 109.4 186 44.6
AL6G32490 Arabidopsis lyrata HOM05D004779 ORTHO05D005737 1.0e-21 107.5 187 46.0
Eucgr.J00599 Eucalyptus grandis HOM05D004779 ORTHO05D005737 1.8e-21 106.7 185 47.6
Aqoxy1G00564 Aquilegia oxysepala HOM05D004779 ORTHO05D005737 3.0e-21 105.9 172 49.4
AT5G20930 Arabidopsis thaliana HOM05D004779 ORTHO05D005737 3.0e-21 105.9 189 41.8
Gohir.D07G118400 Gossypium hirsutum HOM05D004779 ORTHO05D005737 5.2e-21 105.1 176 46.6
Gohir.A07G114480 Gossypium hirsutum HOM05D004779 ORTHO05D005737 4.4e-20 102.1 178 44.9
CAN.G439.1 Capsicum annuum HOM05D004779 ORTHO05D005737 5.7e-20 101.7 172 46.5
Carub.0006s1924 Capsella rubella HOM05D004779 ORTHO05D005737 9.8e-20 100.9 171 45.0
Atru.chr3.3301 Acer truncatum HOM05D004779 ORTHO05D005737 1.7e-19 100.1 180 43.9
Lsat_1_v5_gn_3_114561 Lactuca sativa HOM05D004779 ORTHO05D005737 4.9e-19 98.6 183 45.9
PSO384G0479 Papaver somniferum HOM05D004779 ORTHO05D005737 8.3e-19 97.8 171 50.9
Aa31LG1G13840 Aethionema arabicum HOM05D004779 ORTHO05D005737 4.1e-18 95.5 136 47.8
Actinidia12899 Actinidia chinensis HOM05D004779 ORTHO05D005737 5.4e-18 95.1 191 41.4
CARHR191920 Cardamine hirsuta HOM05D004779 ORTHO05D005737 5.4e-18 95.1 131 47.3
Sp6g23590 Schrenkiella parvula HOM05D004779 ORTHO05D005737 5.4e-18 95.1 133 47.4
HanXRQChr03g0091061 Helianthus annuus HOM05D004779 ORTHO05D005737 7.0e-18 94.7 171 46.2
HanXRQChr13g0420201 Helianthus annuus HOM05D004779 ORTHO05D005737 7.0e-18 94.7 171 45.0
Potri.004G193300 Populus trichocarpa HOM05D004779 ORTHO05D005737 7.0e-18 94.7 181 48.1
Thhalv10012855m.g Eutrema salsugineum HOM05D004779 ORTHO05D005737 1.6e-17 93.6 178 44.4
CDE01G0526 Ceratophyllum demersum HOM05D004779 ORTHO05D005737 2.0e-17 93.2 171 48.0
ATR0697G120 Amborella trichopoda HOM05D004779 ORTHO05D005737 1.0e-16 90.9 170 45.3
PSO339G0772 Papaver somniferum HOM05D004779 ORTHO05D005737 1.3e-16 90.5 173 49.7
THA.LOC104810971 Tarenaya hassleriana HOM05D004779 ORTHO05D005737 2.9e-16 89.4 178 45.5
SEGI_33986 Sequoiadendron giganteum HOM05D004779 ORTHO05D005737 8.6e-16 87.8 168 39.9
DCAR_012261 Daucus carota HOM05D004779 ORTHO05D005737 1.1e-15 87.4 170 41.8
MSTRG.21000 Avicennia marina HOM05D004779 ORTHO05D005737 1.5e-15 87.0 190 41.1
CDE05G1310 Ceratophyllum demersum HOM05D004779 ORTHO05D005737 1.9e-15 86.7 134 51.5
SGA_v2.0_scaffold7G04016 Striga asiatica HOM05D004779 ORTHO05D005737 2.5e-15 86.3 147 44.2
Cfa005492 Carpinus fangiana HOM05D004779 ORTHO05D005737 3.3e-15 85.9 214 38.8
Migut.D02461 Erythranthe guttata HOM05D004779 ORTHO05D005737 4.3e-15 85.5 187 47.1
A10p19090 Brassica napus HOM05D004779 ORTHO05D005737 9.5e-15 84.3 121 46.3
C02p10520 Brassica napus HOM05D004779 ORTHO05D005737 1.2e-14 84.0 133 43.6
BraA02t05604Z Brassica rapa HOM05D004779 ORTHO05D005737 1.2e-14 84.0 133 43.6
Gorai.001G127300 Gossypium raimondii HOM05D004779 ORTHO05D005737 1.6e-14 83.6 176 40.9
HPP92_004176 Vanilla planifolia HOM05D004779 ORTHO05D005737 4.7e-14 82.0 129 45.7
BcaC04g19491 Brassica carinata HOM05D004779 ORTHO05D005737 1.0e-13 80.9 127 44.9
C09p55170 Brassica napus HOM05D004779 ORTHO05D005737 1.0e-13 80.9 127 44.9
SalBow6G6366 Salvia bowleyana HOM05D004779 ORTHO05D005737 1.4e-13 80.5 185 40.0
BcaB05g22801 Brassica carinata HOM05D004779 ORTHO05D005737 3.0e-13 79.3 171 38.6
BolC9t58378H Brassica oleracea HOM05D004779 ORTHO05D005737 1.2e-12 77.4 142 44.4
MSTRG.18803 Avicennia marina HOM05D004779 ORTHO05D005737 1.5e-12 77.0 145 44.1
BraA10t43988Z Brassica rapa HOM05D004779 ORTHO05D005737 5.7e-12 75.1 136 41.9
BcaB08g37316 Brassica carinata HOM05D004779 ORTHO05D005737 1.7e-11 73.6 133 38.3
Migut.O00734 Erythranthe guttata HOM05D004779 ORTHO05D005737 3.2e-10 69.3 176 44.9
QL01p018814 Quercus lobata HOM05D004779 ORTHO05D005737 3.2e-10 69.3 217 38.2
MBI05_g37654_MAGBIO Magnolia biondii HOM05D004779 ORTHO05D005737 5.4e-10 68.6 157 38.9
BolC2t07083H Brassica oleracea HOM05D004779 ORTHO05D005737 7.0e-10 68.2 133 38.3
BcaC03g13814 Brassica carinata HOM05D004779 ORTHO05D005737 9.2e-10 67.8 132 38.6
BNapus_Darmor_BZH_scaffold_38p01260 Brassica napus HOM05D004779 ORTHO05D005737 9.2e-10 67.8 136 39.0
Oeu026350.1 Olea europaea HOM05D004779 ORTHO05D005737 1.6e-09 67.0 193 43.5
ECA240G3152 Erigeron canadensis HOM05D004779 ORTHO05D005737 2.0e-09 66.6 134 39.6
Medtr5g087240 Medicago truncatula HOM05D004779 ORTHO05D005737 3.3e-07 59.3 107 46.7
SHI25305 Sapria himalayana HOM05D004779 ORTHO05D005737 4.3e-07 58.9 73 54.8
SHI25307 Sapria himalayana HOM05D000105 ORTHO05D005737 1.2e-06 57.4 96 42.7
Zm00001eb214860 Zea mays HOM05D004779 ORTHO05D005737 2.8e-06 56.2 167 43.1
Mapoly0004s0128 Marchantia polymorpha HOM05D004779 ORTHO05D005737 3.6e-06 55.8 132 34.1


User provided reference genes

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