Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G4071 Fragaria x ananassa HOM05D000576 ORTHO05D000368 7.7e-129 463.8 226 100.0
FAN09G4026 Fragaria x ananassa HOM05D000576 ORTHO05D000368 6.0e-89 331.3 273 67.8
FAN14G1291 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.7e-81 305.8 169 93.5
FvH4_6g43901 Fragaria vesca HOM05D000576 ORTHO05D000368 1.3e-80 303.5 169 92.9
RcHm_v2.0_Chr2g0160681 Rosa chinensis HOM05D000576 ORTHO05D000368 1.0e-59 234.2 253 57.3
FAN19G2457 Fragaria x ananassa HOM05D000576 ORTHO05D000368 6.7e-24 115.2 250 36.0
FvH4_1g04270 Fragaria vesca HOM05D000576 ORTHO05D000368 1.1e-23 114.4 253 34.4
FvH4_1g04271 Fragaria vesca HOM05D000576 ORTHO05D000368 2.6e-23 113.2 250 35.6
FAN19G1792 Fragaria x ananassa HOM05D000576 ORTHO05D000368 7.5e-23 111.7 250 34.8
Prupe.6G354500 Prunus persica HOM05D000576 ORTHO05D000368 1.3e-22 110.9 263 36.5
RcHm_v2.0_Chr3g0449571 Rosa chinensis HOM05D000576 ORTHO05D000368 6.3e-22 108.6 152 40.8
RcHm_v2.0_Chr3g0449821 Rosa chinensis HOM05D000576 ORTHO05D000368 6.3e-22 108.6 268 33.2
FAN10G2720 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.4e-21 107.5 60 93.3
RcHm_v2.0_Chr3g0449591 Rosa chinensis HOM05D000576 ORTHO05D000368 5.3e-21 105.5 152 39.5
FvH4_1g04280 Fragaria vesca HOM05D000576 ORTHO05D000368 7.0e-21 105.1 249 34.5
Prupe.7G247200 Prunus persica HOM05D000576 ORTHO05D000368 1.2e-20 104.4 251 33.5
FvH4_6g01970 Fragaria vesca HOM05D000576 ORTHO05D000368 1.6e-20 104.0 267 32.6
Prupe.I001500 Prunus persica HOM05D000576 ORTHO05D000368 1.6e-20 104.0 159 41.5
FAN05G3726 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.0e-20 103.6 267 32.6
RcHm_v2.0_Chr3g0449531 Rosa chinensis HOM05D000576 ORTHO05D000368 2.7e-20 103.2 253 32.4
MD11G1200500 Malus domestica HOM05D000576 ORTHO05D000368 3.5e-20 102.8 162 41.4
FAN14G0093 Fragaria x ananassa HOM05D000576 ORTHO05D000368 4.5e-20 102.4 250 33.6
FAN05G5531 Fragaria x ananassa HOM05D000576 ORTHO05D000368 7.7e-20 101.7 267 32.2
MD14G1064800 Malus domestica HOM05D000576 ORTHO05D000368 1.7e-19 100.5 169 43.8
FAN05G5357 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.2e-19 100.1 256 34.0
FAN02G2935 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.9e-19 99.8 267 32.2
FvH4_6g01230 Fragaria vesca HOM05D000576 ORTHO05D000368 5.0e-19 99.0 165 41.2
FAN05G4495 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.5e-18 97.4 165 40.6
MD02G1269100 Malus domestica HOM05D000576 ORTHO05D000368 1.5e-18 97.4 163 41.1
FAN14G1549 Fragaria x ananassa HOM05D000576 ORTHO05D000368 3.2e-18 96.3 154 40.9
FvH4_7g08150 Fragaria vesca HOM05D000576 ORTHO05D000368 4.2e-18 95.9 163 41.1
FAN06G0443 Fragaria x ananassa HOM05D000576 ORTHO05D000368 4.2e-18 95.9 163 41.1
FAN05G5241 Fragaria x ananassa HOM05D000576 ORTHO05D000368 5.5e-18 95.5 165 41.2
FAN09G4413 Fragaria x ananassa HOM05D000576 ORTHO05D000368 5.5e-18 95.5 161 40.4
Prupe.8G213700 Prunus persica HOM05D000576 ORTHO05D000368 7.2e-18 95.1 153 41.2
FAN01G1348 Fragaria x ananassa HOM05D000576 ORTHO05D000368 9.4e-18 94.7 163 40.5
FAN01G1594 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.6e-17 94.0 163 41.1
RcHm_v2.0_Chr3g0480841 Rosa chinensis HOM05D000576 ORTHO05D000368 1.6e-17 94.0 172 41.9
RcHm_v2.0_Chr3g0449551 Rosa chinensis HOM05D000576 ORTHO05D000368 2.7e-17 93.2 123 43.1
Prupe.3G194200 Prunus persica HOM05D000576 ORTHO05D000368 3.6e-17 92.8 152 42.1
FAN14G5717 Fragaria x ananassa HOM05D000576 ORTHO05D000368 4.7e-17 92.4 160 40.0
MD02G1028400 Malus domestica HOM05D000005 ORTHO05D000368 4.7e-17 92.4 153 39.9
Prupe.7G069200 Prunus persica HOM05D000576 ORTHO05D000368 4.7e-17 92.4 259 34.7
Prupe.7G069300 Prunus persica HOM05D000576 ORTHO05D000368 1.0e-16 91.3 184 38.6
Prupe.8G159200 Prunus persica HOM05D000576 ORTHO05D000368 1.4e-16 90.9 183 37.2
Prupe.8G038200 Prunus persica HOM05D000576 ORTHO05D000368 4.0e-16 89.4 153 37.9
FAN28G2519 Fragaria x ananassa HOM05D000576 ORTHO05D000368 5.2e-16 89.0 237 31.6
Prupe.5G181600 Prunus persica HOM05D000576 ORTHO05D000368 6.8e-16 88.6 258 32.2
RcHm_v2.0_Chr1g0360451 Rosa chinensis HOM05D000576 ORTHO05D000368 1.2e-15 87.8 153 39.2
FvH4_6g01850 Fragaria vesca HOM05D000576 ORTHO05D000368 3.4e-15 86.3 152 36.2
FAN10G3990 Fragaria x ananassa HOM05D000576 ORTHO05D000368 3.4e-15 86.3 61 78.7
Prupe.1G269300 Prunus persica HOM05D000576 ORTHO05D000368 9.8e-15 84.7 189 37.0
RcHm_v2.0_Chr7g0197551 Rosa chinensis HOM05D000576 ORTHO05D000368 1.7e-14 84.0 188 33.0
RcHm_v2.0_Chr7g0184481 Rosa chinensis HOM05D000576 ORTHO05D000368 2.2e-14 83.6 262 34.0
RcHm_v2.0_Chr7g0184471 Rosa chinensis HOM05D000576 ORTHO05D000368 3.7e-14 82.8 268 33.2
FAN05G2942 Fragaria x ananassa HOM05D000576 ORTHO05D000368 8.3e-14 81.6 50 76.0
Prupe.6G354300 Prunus persica HOM05D000576 ORTHO05D000368 1.8e-13 80.5 163 39.3
RcHm_v2.0_Chr1g0330451 Rosa chinensis HOM05D000576 ORTHO05D000368 4.1e-13 79.3 263 30.0
MD12G1064700 Malus domestica HOM05D000576 ORTHO05D000368 9.1e-13 78.2 158 39.9
FAN19G2202 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.2e-12 77.8 183 31.1
MD15G1437600 Malus domestica HOM05D000576 ORTHO05D000368 1.2e-12 77.8 153 36.6
MD02G1024500 Malus domestica HOM05D000576 ORTHO05D000368 2.0e-12 77.0 211 31.3
RcHm_v2.0_Chr2g0105201 Rosa chinensis HOM05D000576 ORTHO05D000368 2.7e-12 76.6 153 36.6
FAN14G5141 Fragaria x ananassa HOM05D000576 ORTHO05D000368 4.5e-12 75.9 143 39.2
MD02G1024100 Malus domestica HOM05D000576 ORTHO05D000368 7.7e-12 75.1 282 29.4
FvH4_6g01240 Fragaria vesca HOM05D000576 ORTHO05D000368 1.3e-11 74.3 155 36.8
Hma1.2p1_0024F.1_g015920 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 1.3e-11 74.3 172 33.7
RcHm_v2.0_Chr2g0105211 Rosa chinensis HOM05D000576 ORTHO05D000368 2.2e-11 73.6 154 37.0
CSS0015792 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 2.9e-11 73.2 188 31.9
Dinv21743 Davidia involucrata HOM05D000576 ORTHO05D000368 5.0e-11 72.4 167 32.3
FvH4_1g15880 Fragaria vesca HOM05D000576 ORTHO05D000368 5.0e-11 72.4 145 36.6
Cc02_g06350 Coffea canephora HOM05D000576 ORTHO05D000368 6.5e-11 72.0 155 32.3
TAR636G0024 Trochodendron aralioides HOM05D000576 ORTHO05D000368 6.5e-11 72.0 161 34.2
MSTRG.8963 Avicennia marina HOM05D000576 ORTHO05D000368 8.5e-11 71.6 250 27.2
Oeu048256.1 Olea europaea HOM05D000576 ORTHO05D000368 1.1e-10 71.2 157 31.8
SGA_v2.0_scaffold44G16702 Striga asiatica HOM05D000576 ORTHO05D000368 1.5e-10 70.9 171 30.4
TAR636G3326 Trochodendron aralioides HOM05D000576 ORTHO05D000368 1.5e-10 70.9 160 33.8
FvH4_1g04260 Fragaria vesca HOM05D002514 ORTHO05D000368 1.9e-10 70.5 250 28.8
Migut.F00694 Erythranthe guttata HOM05D000576 ORTHO05D000368 4.2e-10 69.3 186 28.0
Migut.J00208 Erythranthe guttata HOM05D000576 ORTHO05D000368 4.2e-10 69.3 161 35.4
MD05G1360100 Malus domestica HOM05D000576 ORTHO05D000368 1.2e-09 67.8 111 43.2
FvH4_1g15681 Fragaria vesca HOM05D000576 ORTHO05D000368 1.6e-09 67.4 169 30.8
Lsat_1_v5_gn_8_12640 Lactuca sativa HOM05D000576 ORTHO05D000368 2.1e-09 67.0 170 28.8
TAR371G0526 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.1e-09 67.0 160 33.1
FvH4_2g38801 Fragaria vesca HOM05D000576 ORTHO05D000368 2.7e-09 66.6 251 30.3
QL10p005342 Quercus lobata HOM05D000576 ORTHO05D000368 6.1e-09 65.5 153 34.0
ECA233G4739 Erigeron canadensis HOM05D000576 ORTHO05D000368 8.0e-09 65.1 183 28.4
Hma1.2p1_1488F.1_g286620 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 8.0e-09 65.1 154 32.5
Hma1.2p1_1791F.1_g302520 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 8.0e-09 65.1 156 32.1
QL10p004689 Quercus lobata HOM05D000576 ORTHO05D000368 1.0e-08 64.7 169 32.0
FvH4_6g30411 Fragaria vesca HOM05D000576 ORTHO05D000368 2.3e-08 63.5 124 37.1
Prupe.5G213700 Prunus persica HOM05D000576 ORTHO05D000368 2.3e-08 63.5 162 34.0
FAN15G0784 Fragaria x ananassa HOM05D000576 ORTHO05D000368 3.0e-08 63.2 158 35.4
Hma1.2p1_2024F.1_g311420 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 3.0e-08 63.2 201 29.9
MD02G1023900 Malus domestica HOM05D003622 ORTHO05D048666 3.0e-08 63.2 101 41.6
Migut.J00888 Erythranthe guttata HOM05D000576 ORTHO05D000368 4.0e-08 62.8 155 31.6
FAN07G1944 Fragaria x ananassa HOM05D000576 ORTHO05D000368 4.0e-08 62.8 128 38.3
Cfa001772 Carpinus fangiana HOM05D000576 ORTHO05D000368 6.8e-08 62.0 174 33.3
FvH4_6g05160 Fragaria vesca HOM05D000576 ORTHO05D000368 6.8e-08 62.0 239 31.0
FAN20G1480 Fragaria x ananassa HOM05D000576 ORTHO05D000368 6.8e-08 62.0 153 36.6
Migut.F01284 Erythranthe guttata HOM05D000576 ORTHO05D000368 8.8e-08 61.6 186 32.3
Migut.G00965 Erythranthe guttata HOM05D000576 ORTHO05D000368 8.8e-08 61.6 156 35.3
RcHm_v2.0_Chr7g0192671 Rosa chinensis HOM05D000576 ORTHO05D000368 1.5e-07 60.8 261 29.9
COL.COLO4_13160 Corchorus olitorius HOM05D000576 ORTHO05D000368 2.0e-07 60.5 155 34.8
QL03p059577 Quercus lobata HOM05D000576 ORTHO05D000368 2.6e-07 60.1 152 32.9
Migut.J00162 Erythranthe guttata HOM05D000576 ORTHO05D000368 3.4e-07 59.7 164 32.3
Nitab4.5_0000099g0260 Nicotiana tabacum HOM05D000576 ORTHO05D000368 3.4e-07 59.7 170 29.4
Migut.J00215 Erythranthe guttata HOM05D000576 ORTHO05D000368 4.4e-07 59.3 184 28.3
Ciclev10033832m.g Citrus clementina HOM05D000576 ORTHO05D000368 5.7e-07 58.9 147 34.0
Migut.J00697 Erythranthe guttata HOM05D000576 ORTHO05D000368 5.7e-07 58.9 156 32.7
Hma1.2p1_0108F.1_g052030 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 9.8e-07 58.2 154 31.2
COL.COLO4_27090 Corchorus olitorius HOM05D000576 ORTHO05D000368 1.3e-06 57.8 164 28.7
FAN14G4441 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.3e-06 57.8 157 38.2
Cc10_g03840 Coffea canephora HOM05D000576 ORTHO05D000368 1.7e-06 57.4 156 30.8
FAN26G1711 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.7e-06 57.4 144 34.0
HanXRQChr08g0221771 Helianthus annuus HOM05D000576 ORTHO05D000368 1.7e-06 57.4 184 27.7
FAN19G3107 Fragaria x ananassa HOM05D000555 ORTHO05D000646 2.2e-06 57.0 145 32.4
Nitab4.5_0008827g0010 Nicotiana tabacum HOM05D000576 ORTHO05D000368 2.2e-06 57.0 168 28.6
Rhsim08G0187200 Rhododendron simsii HOM05D000576 ORTHO05D000368 2.2e-06 57.0 155 32.9
FvH4_6g05140 Fragaria vesca HOM05D000576 ORTHO05D000368 2.8e-06 56.6 152 36.2
FAN23G1369 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.8e-06 56.6 161 28.6
Cc03_g13650 Coffea canephora HOM05D000576 ORTHO05D000368 3.7e-06 56.2 159 35.2
Migut.J00569 Erythranthe guttata HOM05D000576 ORTHO05D000368 3.7e-06 56.2 157 28.0
FAN05G4776 Fragaria x ananassa HOM05D000205 ORTHO05D000438 3.7e-06 56.2 157 37.6
FAN14G4230 Fragaria x ananassa HOM05D000576 ORTHO05D000368 3.7e-06 56.2 153 30.1
Lj5A96T52 Lonicera japonica HOM05D000576 ORTHO05D000368 3.7e-06 56.2 166 28.3
QL10p004673 Quercus lobata HOM05D000576 ORTHO05D000368 3.7e-06 56.2 169 29.6
TWI31G1446 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 3.7e-06 56.2 155 31.0
vmacro05628 Vaccinium macrocarpon HOM05D000006 ORTHO05D000001 3.7e-06 56.2 155 29.0
COL.COLO4_34465 Corchorus olitorius HOM05D000576 ORTHO05D000368 4.9e-06 55.8 155 29.0
FvH4_6g05150 Fragaria vesca HOM05D000576 ORTHO05D000368 6.3e-06 55.5 157 37.6
FAN14G3375 Fragaria x ananassa HOM05D000576 ORTHO05D000368 6.3e-06 55.5 157 37.6
Migut.J00273 Erythranthe guttata HOM05D000576 ORTHO05D000368 8.3e-06 55.1 156 32.1
FAN14G0572 Fragaria x ananassa HOM05D000576 ORTHO05D000368 8.3e-06 55.1 157 37.6
Rhsim01G0067400 Rhododendron simsii HOM05D000576 ORTHO05D000368 8.3e-06 55.1 160 28.1
TWI63G0443 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 8.3e-06 55.1 120 35.0


User provided reference genes

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